RNA–Protein interactions for RNA: ENST00000611776.4

ABCA13-208, Transcript of ATP binding cassette subfamily A member 13, human

TSL 1 (best)

Gene ABCA13, Length 7,250 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA13-208	ENST00000611776	SPRR5	A0A1B0GTR4	108 aa		3.34	□□□□□ -1.87
ABCA13-208	ENST00000611776	KMT2A	Q03164	3969 aa		3.33	□□□□□ -1.88
ABCA13-208	ENST00000611776	MT1HL1	P0DM35	61 aa		3.31	□□□□□ -1.88
ABCA13-208	ENST00000611776	SPRR2F	Q96RM1	72 aa		3.3	□□□□□ -1.88
ABCA13-208	ENST00000611776	KRTAP10-5	P60370	271 aa		3.29	□□□□□ -1.88
ABCA13-208	ENST00000611776	DNAH7	Q8WXX0	4024 aa		3.28	□□□□□ -1.88
ABCA13-208	ENST00000611776	KRTAP3-1	Q9BYR8	98 aa		3.27	□□□□□ -1.89
ABCA13-208	ENST00000611776	SPRR2E	P22531	72 aa		3.26	□□□□□ -1.89
ABCA13-208	ENST00000611776	SPRR2B	P35325	72 aa		3.26	□□□□□ -1.89
ABCA13-208	ENST00000611776	SPRR2A	P35326	72 aa		3.26	□□□□□ -1.89
ABCA13-208	ENST00000611776	DNAH9	Q9NYC9	4486 aa		3.25	□□□□□ -1.89
ABCA13-208	ENST00000611776	KRTAP13-4	Q3LI77	160 aa		3.24	□□□□□ -1.89
ABCA13-208	ENST00000611776	DNAH1	Q9P2D7	4330 aa		3.23	□□□□□ -1.89
ABCA13-208	ENST00000611776	KRTAP12-1	P59990	96 aa		3.21	□□□□□ -1.9
ABCA13-208	ENST00000611776	ALMS1	Q8TCU4	4167 aa		3.19	□□□□□ -1.9
ABCA13-208	ENST00000611776	DNAH3	Q8TD57	4116 aa		3.19	□□□□□ -1.9
ABCA13-208	ENST00000611776	DNAH2	Q9P225	4427 aa		3.17	□□□□□ -1.9
ABCA13-208	ENST00000611776	VPS13B	Q7Z7G8	4022 aa		3.17	□□□□□ -1.9
ABCA13-208	ENST00000611776	KRTAP9-6	A0A140TA67	174 aa		3.17	□□□□□ -1.9
ABCA13-208	ENST00000611776	DNAH6	Q9C0G6	4158 aa		3.16	□□□□□ -1.9
ABCA13-208	ENST00000611776	SPRR2D	P22532	72 aa		3.15	□□□□□ -1.9
ABCA13-208	ENST00000611776	PLEC	Q15149	4684 aa	Known RBP	3.15	□□□□□ -1.91
ABCA13-208	ENST00000611776	KRTAP10-12	P60413	245 aa		3.15	□□□□□ -1.91
ABCA13-208	ENST00000611776	KRTAP23-1	A1A580	65 aa		3.13	□□□□□ -1.91
ABCA13-208	ENST00000611776	KRTAP9-2	Q9BYQ4	174 aa		3.13	□□□□□ -1.91
ABCA13-208	ENST00000611776	DNAH11	Q96DT5	4516 aa		3.11	□□□□□ -1.91
ABCA13-208	ENST00000611776	PRKDC	P78527	4128 aa	Known RBP	3.11	□□□□□ -1.91
ABCA13-208	ENST00000611776	DNAH8	Q96JB1	4490 aa		3.11	□□□□□ -1.91
ABCA13-208	ENST00000611776	HECTD4	Q9Y4D8	3996 aa		3.11	□□□□□ -1.91
ABCA13-208	ENST00000611776	KRTAP10-4	P60372	401 aa	Predicted RBP	3.1	□□□□□ -1.91
ABCA13-208	ENST00000611776	DNAH17	Q9UFH2	4485 aa		3.09	□□□□□ -1.91
ABCA13-208	ENST00000611776	STARD9	Q9P2P6	4700 aa		3.09	□□□□□ -1.91
ABCA13-208	ENST00000611776	VPS13D	Q5THJ4	4388 aa		3.08	□□□□□ -1.92
ABCA13-208	ENST00000611776	KRTAP3-3	Q9BYR6	98 aa		3.06	□□□□□ -1.92
ABCA13-208	ENST00000611776	MT1H	P80294	61 aa		3.05	□□□□□ -1.92
ABCA13-208	ENST00000611776	KRTAP3-2	Q9BYR7	98 aa		3.03	□□□□□ -1.92
ABCA13-208	ENST00000611776	INE1	O15225	51 aa		3.02	□□□□□ -1.93
ABCA13-208	ENST00000611776	LCE2B	O14633	110 aa		2.97	□□□□□ -1.93
ABCA13-208	ENST00000611776	KRTAP20-1	Q3LI63	56 aa		2.95	□□□□□ -1.94
ABCA13-208	ENST00000611776	PKHD1	P08F94	4074 aa		2.94	□□□□□ -1.94
ABCA13-208	ENST00000611776	DYNC2H1	Q8NCM8	4307 aa	Known RBP	2.94	□□□□□ -1.94
ABCA13-208	ENST00000611776	FAT1	Q14517	4588 aa		2.93	□□□□□ -1.94
ABCA13-208	ENST00000611776	FAT2	Q9NYQ8	4349 aa		2.92	□□□□□ -1.94
ABCA13-208	ENST00000611776	KRTAP9-7	A8MTY7	169 aa		2.92	□□□□□ -1.94
ABCA13-208	ENST00000611776	LCE2C	Q5TA81	110 aa		2.91	□□□□□ -1.94
ABCA13-208	ENST00000611776	LCE2D	Q5TA82	110 aa	Predicted RBP	2.91	□□□□□ -1.94
ABCA13-208	ENST00000611776	LRP1B	Q9NZR2	4599 aa		2.91	□□□□□ -1.94
ABCA13-208	ENST00000611776	DNAH5	Q8TE73	4624 aa		2.9	□□□□□ -1.95
ABCA13-208	ENST00000611776	MT4	P47944	62 aa		2.89	□□□□□ -1.95
ABCA13-208	ENST00000611776	KRTAP12-3	P60328	96 aa		2.89	□□□□□ -1.95
ABCA13-208	ENST00000611776	KRTAP19-1	Q8IUB9	90 aa		2.88	□□□□□ -1.95
ABCA13-208	ENST00000611776	FAT3	Q8TDW7	4589 aa		2.87	□□□□□ -1.95
ABCA13-208	ENST00000611776	MT2A	P02795	61 aa		2.87	□□□□□ -1.95
ABCA13-208	ENST00000611776	KRTAP4-1	Q9BYQ7	146 aa		2.85	□□□□□ -1.95
ABCA13-208	ENST00000611776	MYCBP2	O75592	4640 aa		2.85	□□□□□ -1.95
ABCA13-208	ENST00000611776	DNHD1	Q96M86	4753 aa		2.84	□□□□□ -1.95
ABCA13-208	ENST00000611776	APOB	P04114	4563 aa	Known RBP	2.84	□□□□□ -1.95
ABCA13-208	ENST00000611776	LCE3A	Q5TA76	89 aa		2.83	□□□□□ -1.96
ABCA13-208	ENST00000611776	KRTAP12-4	P60329	112 aa		2.83	□□□□□ -1.96
ABCA13-208	ENST00000611776	LRP1	Q07954	4544 aa	Known RBP	2.83	□□□□□ -1.96
ABCA13-208	ENST00000611776	LPA	P08519	4548 aa		2.82	□□□□□ -1.96
ABCA13-208	ENST00000611776	MT1F	P04733	61 aa		2.8	□□□□□ -1.96
ABCA13-208	ENST00000611776	SACS	Q9NZJ4	4579 aa		2.79	□□□□□ -1.96
ABCA13-208	ENST00000611776	DYNC1H1	Q14204	4646 aa	Known RBP	2.77	□□□□□ -1.97
ABCA13-208	ENST00000611776	LCE3B	Q5TA77	95 aa		2.75	□□□□□ -1.97
ABCA13-208	ENST00000611776	PKD1	P98161	4303 aa		2.75	□□□□□ -1.97
ABCA13-208	ENST00000611776	PKHD1L1	Q86WI1	4243 aa		2.73	□□□□□ -1.97
ABCA13-208	ENST00000611776	HSPG2	P98160	4391 aa		2.73	□□□□□ -1.97
ABCA13-208	ENST00000611776	HYDIN	Q4G0P3	5121 aa		2.73	□□□□□ -1.97
ABCA13-208	ENST00000611776	SPRR2G	Q9BYE4	73 aa		2.72	□□□□□ -1.97
ABCA13-208	ENST00000611776	TNXB	P22105	4242 aa		2.68	□□□□□ -1.98
ABCA13-208	ENST00000611776	RYR1	P21817	5038 aa		2.67	□□□□□ -1.98
ABCA13-208	ENST00000611776	KRTAP19-5	Q3LI72	72 aa		2.66	□□□□□ -1.98
ABCA13-208	ENST00000611776	LRP2	P98164	4655 aa		2.63	□□□□□ -1.99
ABCA13-208	ENST00000611776	KRTAP2-3	P0C7H8	128 aa		2.61	□□□□□ -1.99
ABCA13-208	ENST00000611776	KRTAP2-4	Q9BYR9	128 aa		2.61	□□□□□ -1.99
ABCA13-208	ENST00000611776	BIRC6	Q9NR09	4857 aa		2.61	□□□□□ -1.99
ABCA13-208	ENST00000611776	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	2.6	□□□□□ -1.99
ABCA13-208	ENST00000611776	KRTAP19-6	Q3LI70	58 aa		2.6	□□□□□ -1.99
ABCA13-208	ENST00000611776	HERC2	O95714	4834 aa		2.58	□□□□□ -2
ABCA13-208	ENST00000611776	LCE3E	Q5T5B0	92 aa		2.58	□□□□□ -2
ABCA13-208	ENST00000611776	SYNE2	Q8WXH0	6885 aa	Known RBP	2.57	□□□□□ -2
ABCA13-208	ENST00000611776	KRTAP4-9	Q9BYQ8	210 aa		2.57	□□□□□ -2
ABCA13-208	ENST00000611776	MT1G	P13640	62 aa		2.57	□□□□□ -2
ABCA13-208	ENST00000611776	LCE3C	Q5T5A8	94 aa		2.57	□□□□□ -2
ABCA13-208	ENST00000611776	LCE1B	Q5T7P3	118 aa		2.56	□□□□□ -2
ABCA13-208	ENST00000611776	FLG	P20930	4061 aa	Predicted RBP	2.55	□□□□□ -2
ABCA13-208	ENST00000611776	RYR3	Q15413	4870 aa		2.53	□□□□□ -2
ABCA13-208	ENST00000611776	LCE1D	Q5T752	114 aa		2.51	□□□□□ -2.01
ABCA13-208	ENST00000611776	LCE5A	Q5TCM9	118 aa		2.51	□□□□□ -2.01
ABCA13-208	ENST00000611776	KRTAP4-8	A0A0G2JLE6	195 aa		2.5	□□□□□ -2.01
ABCA13-208	ENST00000611776	KRTAP4-8	Q9BYQ9	185 aa		2.5	□□□□□ -2.01
ABCA13-208	ENST00000611776	KMT2C	Q8NEZ4	4911 aa	Known RBP	2.49	□□□□□ -2.01
ABCA13-208	ENST00000611776	LCE3D	Q9BYE3	92 aa		2.49	□□□□□ -2.01
ABCA13-208	ENST00000611776	LCE1C	Q5T751	118 aa		2.49	□□□□□ -2.01
ABCA13-208	ENST00000611776	LCE1E	Q5T753	118 aa		2.49	□□□□□ -2.01
ABCA13-208	ENST00000611776	LCE1F	Q5T754	118 aa		2.49	□□□□□ -2.01
ABCA13-208	ENST00000611776	LCE1A	Q5T7P2	110 aa		2.49	□□□□□ -2.01
ABCA13-208	ENST00000611776	KRTAP2-2	Q9BYT5	123 aa		2.47	□□□□□ -2.01
ABCA13-208	ENST00000611776	KRTAP2-1	Q9BYU5	128 aa		2.47	□□□□□ -2.01

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