RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 HECTD4Q9Y4D8 3996 aa8.85□□□□□ -0.99
CDK11B-205ENST00000611150 DNAH17Q9UFH2 4485 aa8.83□□□□□ -1
CDK11B-205ENST00000611150 FAT2Q9NYQ8 4349 aa8.82□□□□□ -1
CDK11B-205ENST00000611150 DNAH8Q96JB1 4490 aa8.81□□□□□ -1
CDK11B-205ENST00000611150 A0A1B0GVY2 172 aa8.78□□□□□ -1
CDK11B-205ENST00000611150 PKD1P98161 4303 aa8.75□□□□□ -1.01
CDK11B-205ENST00000611150 PKHD1P08F94 4074 aa8.73□□□□□ -1.01
CDK11B-205ENST00000611150 KRTAP13-2Q52LG2 175 aa8.72□□□□□ -1.01
CDK11B-205ENST00000611150 KRTAP12-1P59990 96 aa8.71□□□□□ -1.01
CDK11B-205ENST00000611150 PRO2289Q9P1D8 64 aa8.7□□□□□ -1.02
CDK11B-205ENST00000611150 DNAH11Q96DT5 4516 aa8.68□□□□□ -1.02
CDK11B-205ENST00000611150 DYNC1H1Q14204 4646 aaKnown RBP8.67□□□□□ -1.02
CDK11B-205ENST00000611150 HERC2O95714 4834 aa8.67□□□□□ -1.02
CDK11B-205ENST00000611150 Q6ZRN7 208 aaPredicted RBP8.67□□□□□ -1.02
CDK11B-205ENST00000611150 KIAA1109Q2LD37 5005 aa8.66□□□□□ -1.02
CDK11B-205ENST00000611150 LRP1BQ9NZR2 4599 aa8.57□□□□□ -1.04
CDK11B-205ENST00000611150 KRTAP10-2P60368 255 aa8.56□□□□□ -1.04
CDK11B-205ENST00000611150 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
CDK11B-205ENST00000611150 RYR1P21817 5038 aa8.54□□□□□ -1.04
CDK11B-205ENST00000611150 DNAH5Q8TE73 4624 aa8.53□□□□□ -1.04
CDK11B-205ENST00000611150 HSPG2P98160 4391 aa8.51□□□□□ -1.05
CDK11B-205ENST00000611150 KRTAP17-1Q9BYP8 105 aa8.49□□□□□ -1.05
CDK11B-205ENST00000611150 APOBP04114 4563 aaKnown RBP8.49□□□□□ -1.05
CDK11B-205ENST00000611150 PCLOQ9Y6V0 5065 aa8.46□□□□□ -1.05
CDK11B-205ENST00000611150 KRTAP4-5Q9BYR2 181 aa8.44□□□□□ -1.06
CDK11B-205ENST00000611150 KRTAP10-1P60331 282 aa8.42□□□□□ -1.06
CDK11B-205ENST00000611150 KRTAP10-8P60410 259 aa8.42□□□□□ -1.06
CDK11B-205ENST00000611150 C9orf92A6NGG3 77 aa8.41□□□□□ -1.06
CDK11B-205ENST00000611150 ABCA13Q86UQ4 5058 aa8.4□□□□□ -1.06
CDK11B-205ENST00000611150 R4GN34 69 aa8.39□□□□□ -1.07
CDK11B-205ENST00000611150 M0QZ58 72 aa8.38□□□□□ -1.07
CDK11B-205ENST00000611150 KRTAP1-4P0C5Y4 121 aa8.36□□□□□ -1.07
CDK11B-205ENST00000611150 RPS29P62273 56 aaKnown RBP8.33□□□□□ -1.08
CDK11B-205ENST00000611150 PP632Q6XCG6 107 aa8.32□□□□□ -1.08
CDK11B-205ENST00000611150 FAT1Q14517 4588 aa8.31□□□□□ -1.08
CDK11B-205ENST00000611150 SMR3BP02814 79 aaPredicted RBP8.3□□□□□ -1.08
CDK11B-205ENST00000611150 Q5VSD8 79 aa8.29□□□□□ -1.08
CDK11B-205ENST00000611150 INE1O15225 51 aa8.28□□□□□ -1.08
CDK11B-205ENST00000611150 VPS13BQ7Z7G8 4022 aa8.26□□□□□ -1.09
CDK11B-205ENST00000611150 MYCBP2O75592 4640 aa8.15□□□□□ -1.11
CDK11B-205ENST00000611150 SPRR5A0A1B0GTR4 108 aa8.13□□□□□ -1.11
CDK11B-205ENST00000611150 KRTAP10-4P60372 401 aaPredicted RBP8.1□□□□□ -1.11
CDK11B-205ENST00000611150 HERC1Q15751 4861 aa8.08□□□□□ -1.12
CDK11B-205ENST00000611150 PKHD1L1Q86WI1 4243 aa8□□□□□ -1.13
CDK11B-205ENST00000611150 LRP1Q07954 4544 aaKnown RBP8□□□□□ -1.13
CDK11B-205ENST00000611150 FAT3Q8TDW7 4589 aa7.98□□□□□ -1.13
CDK11B-205ENST00000611150 MT1HL1P0DM35 61 aa7.85□□□□□ -1.15
CDK11B-205ENST00000611150 TNXBP22105 4242 aa7.78□□□□□ -1.16
CDK11B-205ENST00000611150 HMCN2Q8NDA2 5059 aa7.77□□□□□ -1.17
CDK11B-205ENST00000611150 KRTAP23-1A1A580 65 aa7.7□□□□□ -1.18
CDK11B-205ENST00000611150 UBR4Q5T4S7 5183 aa7.6□□□□□ -1.19
CDK11B-205ENST00000611150 LRP2P98164 4655 aa7.57□□□□□ -1.2
CDK11B-205ENST00000611150 TNP1P09430 55 aa7.53□□□□□ -1.2
CDK11B-205ENST00000611150 LPAP08519 4548 aa7.44□□□□□ -1.22
CDK11B-205ENST00000611150 LORP23490 312 aaPredicted RBP7.39□□□□□ -1.23
CDK11B-205ENST00000611150 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
CDK11B-205ENST00000611150 MUC2Q02817 5179 aa7.17□□□□□ -1.26
CDK11B-205ENST00000611150 MUC17Q685J3 4493 aa7.12□□□□□ -1.27
CDK11B-205ENST00000611150 KRTAP10-10P60014 251 aa7.01□□□□□ -1.29
CDK11B-205ENST00000611150 FAT4Q6V0I7 4981 aa6.99□□□□□ -1.29
CDK11B-205ENST00000611150 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
CDK11B-205ENST00000611150 KRTAP4-1Q9BYQ7 146 aa6.93□□□□□ -1.3
CDK11B-205ENST00000611150 LCE3AQ5TA76 89 aa6.88□□□□□ -1.31
CDK11B-205ENST00000611150 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
CDK11B-205ENST00000611150 KRTAP9-2Q9BYQ4 174 aa6.75□□□□□ -1.33
CDK11B-205ENST00000611150 KRTAP19-2Q3LHN2 52 aa6.74□□□□□ -1.33
CDK11B-205ENST00000611150 KRTAP8-1Q8IUC2 63 aa6.73□□□□□ -1.33
CDK11B-205ENST00000611150 KRTAP10-12P60413 245 aa6.72□□□□□ -1.33
CDK11B-205ENST00000611150 FLGP20930 4061 aaPredicted RBP6.69□□□□□ -1.34
CDK11B-205ENST00000611150 MT1HP80294 61 aa6.67□□□□□ -1.34
CDK11B-205ENST00000611150 LCE2DQ5TA82 110 aaPredicted RBP6.57□□□□□ -1.36
CDK11B-205ENST00000611150 M0R2T5 61 aa6.56□□□□□ -1.36
CDK11B-205ENST00000611150 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
CDK11B-205ENST00000611150 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
CDK11B-205ENST00000611150 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
CDK11B-205ENST00000611150 KRTAP10-5P60370 271 aa6.38□□□□□ -1.39
CDK11B-205ENST00000611150 FSIP2Q5CZC0 6907 aa6.38□□□□□ -1.39
CDK11B-205ENST00000611150 KRTAP2-3P0C7H8 128 aa6.33□□□□□ -1.4
CDK11B-205ENST00000611150 KRTAP2-4Q9BYR9 128 aa6.33□□□□□ -1.4
CDK11B-205ENST00000611150 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
CDK11B-205ENST00000611150 KRTAP9-8Q9BYQ0 159 aa6.31□□□□□ -1.4
CDK11B-205ENST00000611150 SPRR2GQ9BYE4 73 aa6.26□□□□□ -1.41
CDK11B-205ENST00000611150 MT2AP02795 61 aa6.22□□□□□ -1.41
CDK11B-205ENST00000611150 LCE3CQ5T5A8 94 aa6.22□□□□□ -1.41
CDK11B-205ENST00000611150 MT1FP04733 61 aa6.17□□□□□ -1.42
CDK11B-205ENST00000611150 USH2AO75445 5202 aa6.12□□□□□ -1.43
CDK11B-205ENST00000611150 KRTAP9-3Q9BYQ3 159 aa6.11□□□□□ -1.43
CDK11B-205ENST00000611150 KRTAP19-1Q8IUB9 90 aa6.11□□□□□ -1.43
CDK11B-205ENST00000611150 LCE2BO14633 110 aa6.08□□□□□ -1.44
CDK11B-205ENST00000611150 KRTAP10-7P60409 375 aaPredicted RBP6.07□□□□□ -1.44
CDK11B-205ENST00000611150 SSPOA2VEC9 5147 aa6.06□□□□□ -1.44
CDK11B-205ENST00000611150 KRTAP9-6A8MVA2 160 aa6.03□□□□□ -1.44
CDK11B-205ENST00000611150 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.94□□□□□ -1.46
CDK11B-205ENST00000611150 FCGBPQ9Y6R7 5405 aaPredicted RBP5.94□□□□□ -1.46
CDK11B-205ENST00000611150 KRTAP2-2Q9BYT5 123 aa5.92□□□□□ -1.46
CDK11B-205ENST00000611150 KRTAP12-4P60329 112 aa5.91□□□□□ -1.46
CDK11B-205ENST00000611150 MT1XP80297 61 aa5.87□□□□□ -1.47
CDK11B-205ENST00000611150 KRTAP19-6Q3LI70 58 aa5.87□□□□□ -1.47
CDK11B-205ENST00000611150 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
CDK11B-205ENST00000611150 KRTAP19-5Q3LI72 72 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms