RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 NISCHQ9Y2I1 1504 aa31.15■■■□□ 2.58
CDK11B-205ENST00000611150 PELP1Q8IZL8 1130 aaKnown RBP30.93■■■□□ 2.54
CDK11B-205ENST00000611150 MYT1Q01538 1121 aa30.37■■■□□ 2.45
CDK11B-205ENST00000611150 HRCP23327 699 aa29.17■■■□□ 2.26
CDK11B-205ENST00000611150 TTBK1Q5TCY1 1321 aaPredicted RBP29.06■■■□□ 2.24
CDK11B-205ENST00000611150 SCAF1Q9H7N4 1312 aaKnown RBP28.4■■■□□ 2.14
CDK11B-205ENST00000611150 PPARGC1BQ86YN6 1023 aaKnown RBP28.21■■■□□ 2.11
CDK11B-205ENST00000611150 PRKCSHP14314 528 aaPredicted RBP28■■■□□ 2.07
CDK11B-205ENST00000611150 CCDC180Q9P1Z9 1646 aa27.8■■■□□ 2.04
CDK11B-205ENST00000611150 BCL11AQ9H165 835 aa27.77■■■□□ 2.04
CDK11B-205ENST00000611150 ERICH6Q7L0X2 663 aa27.65■■■□□ 2.02
CDK11B-205ENST00000611150 PCGF6Q9BYE7 350 aa27.62■■■□□ 2.01
CDK11B-205ENST00000611150 FAM9AQ8IZU1 332 aaPredicted RBP27.4■■□□□ 1.98
CDK11B-205ENST00000611150 ABCC9O60706 1549 aa27.4■■□□□ 1.98
CDK11B-205ENST00000611150 CENPBP07199 599 aaPredicted RBP27.38■■□□□ 1.97
CDK11B-205ENST00000611150 APLP2Q06481 763 aa27.36■■□□□ 1.97
CDK11B-205ENST00000611150 ACIN1Q9UKV3 1341 aaKnown RBP27.31■■□□□ 1.96
CDK11B-205ENST00000611150 GTF3C3Q9Y5Q9 886 aa27.11■■□□□ 1.93
CDK11B-205ENST00000611150 ZEB1P37275 1124 aaPredicted RBP27.04■■□□□ 1.92
CDK11B-205ENST00000611150 NEUROD1Q13562 356 aa27.03■■□□□ 1.92
CDK11B-205ENST00000611150 ANP32EQ9BTT0 268 aa26.74■■□□□ 1.87
CDK11B-205ENST00000611150 MYO15BQ96JP2 1530 aa26.72■■□□□ 1.87
CDK11B-205ENST00000611150 SLC24A1O60721 1099 aa26.53■■□□□ 1.84
CDK11B-205ENST00000611150 DCAF1Q9Y4B6 1507 aa26.49■■□□□ 1.83
CDK11B-205ENST00000611150 TRIM26Q12899 539 aaPredicted RBP26.47■■□□□ 1.83
CDK11B-205ENST00000611150 CSRNP3Q8WYN3 585 aa26.36■■□□□ 1.81
CDK11B-205ENST00000611150 RB1CC1Q8TDY2 1594 aa26.27■■□□□ 1.8
CDK11B-205ENST00000611150 NACADO15069 1562 aa26.18■■□□□ 1.78
CDK11B-205ENST00000611150 DCAF8L2P0C7V8 631 aa26.12■■□□□ 1.77
CDK11B-205ENST00000611150 DIEXFQ68CQ4 756 aaKnown RBP25.93■■□□□ 1.74
CDK11B-205ENST00000611150 ZCCHC6Q5VYS8 1495 aaKnown RBP25.89■■□□□ 1.74
CDK11B-205ENST00000611150 CHIC1Q5VXU3 224 aa25.88■■□□□ 1.73
CDK11B-205ENST00000611150 EIF5BO60841 1220 aaKnown RBP25.81■■□□□ 1.72
CDK11B-205ENST00000611150 DAXXQ9UER7 740 aaPredicted RBP25.8■■□□□ 1.72
CDK11B-205ENST00000611150 ANO8Q9HCE9 1232 aaPredicted RBP25.77■■□□□ 1.72
CDK11B-205ENST00000611150 TSHZ2Q9NRE2 1034 aa25.75■■□□□ 1.71
CDK11B-205ENST00000611150 UBE2Q2Q8WVN8 375 aa25.75■■□□□ 1.71
CDK11B-205ENST00000611150 UNC13AQ9UPW8 1703 aa25.67■■□□□ 1.7
CDK11B-205ENST00000611150 CLSPNQ9HAW4 1339 aa25.65■■□□□ 1.7
CDK11B-205ENST00000611150 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
CDK11B-205ENST00000611150 PABPN1Q86U42 306 aaKnown RBP eCLIP25.56■■□□□ 1.68
CDK11B-205ENST00000611150 YTHDC1Q96MU7 727 aaKnown RBP25.54■■□□□ 1.68
CDK11B-205ENST00000611150 BICRAQ9NZM4 1560 aa25.47■■□□□ 1.67
CDK11B-205ENST00000611150 SUPT16HQ9Y5B9 1047 aaKnown RBP25.42■■□□□ 1.66
CDK11B-205ENST00000611150 MYT1LQ9UL68 1186 aa25.36■■□□□ 1.65
CDK11B-205ENST00000611150 DNAJC5BQ9UF47 199 aa25.34■■□□□ 1.65
CDK11B-205ENST00000611150 SCRIBQ14160 1630 aa25.34■■□□□ 1.65
CDK11B-205ENST00000611150 LOC105371045A0A1W2PR82 267 aa25.33■■□□□ 1.65
CDK11B-205ENST00000611150 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
CDK11B-205ENST00000611150 ERICH6BQ5W0A0 696 aa25.31■■□□□ 1.64
CDK11B-205ENST00000611150 SALL2Q9Y467 1007 aaPredicted RBP25.27■■□□□ 1.64
CDK11B-205ENST00000611150 SHROOM4Q9ULL8 1493 aa25.19■■□□□ 1.62
CDK11B-205ENST00000611150 PKNOX2Q96KN3 472 aa25.12■■□□□ 1.61
CDK11B-205ENST00000611150 CCER1Q8TC90 406 aaPredicted RBP25.11■■□□□ 1.61
CDK11B-205ENST00000611150 CCDC136Q96JN2 1154 aa25.11■■□□□ 1.61
CDK11B-205ENST00000611150 PLEKHG5O94827 1062 aa25.09■■□□□ 1.61
CDK11B-205ENST00000611150 ZNF316A6NFI3 1004 aaPredicted RBP25.06■■□□□ 1.6
CDK11B-205ENST00000611150 DEKP35659 375 aaKnown RBP25.04■■□□□ 1.6
CDK11B-205ENST00000611150 RBM19Q9Y4C8 960 aaKnown RBP25.02■■□□□ 1.6
CDK11B-205ENST00000611150 MIER1Q8N108 512 aa25.01■■□□□ 1.59
CDK11B-205ENST00000611150 PODXL2Q9NZ53 605 aa24.98■■□□□ 1.59
CDK11B-205ENST00000611150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.97■■□□□ 1.59
CDK11B-205ENST00000611150 MSH5O43196 834 aa24.87■■□□□ 1.57
CDK11B-205ENST00000611150 EIF4G1Q04637 1599 aaKnown RBP24.82■■□□□ 1.56
CDK11B-205ENST00000611150 CC2D2AQ9P2K1 1620 aa24.78■■□□□ 1.56
CDK11B-205ENST00000611150 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.74■■□□□ 1.55
CDK11B-205ENST00000611150 FANCIQ9NVI1 1328 aa24.71■■□□□ 1.55
CDK11B-205ENST00000611150 CECR2Q9BXF3 1484 aa24.65■■□□□ 1.54
CDK11B-205ENST00000611150 BCANQ96GW7 911 aa24.5■■□□□ 1.51
CDK11B-205ENST00000611150 IL27Q8NEV9 243 aa24.45■■□□□ 1.5
CDK11B-205ENST00000611150 NEFLP07196 543 aa24.42■■□□□ 1.5
CDK11B-205ENST00000611150 RTN4Q9NQC3 1192 aaKnown RBP24.39■■□□□ 1.5
CDK11B-205ENST00000611150 GLIPR1L2Q4G1C9 344 aa24.39■■□□□ 1.49
CDK11B-205ENST00000611150 FKBP8Q14318 412 aa24.37■■□□□ 1.49
CDK11B-205ENST00000611150 SMARCA4P51532 1647 aa24.22■■□□□ 1.47
CDK11B-205ENST00000611150 ZMYND15Q9H091 742 aa24.2■■□□□ 1.46
CDK11B-205ENST00000611150 NBR1Q14596 966 aa24.19■■□□□ 1.46
CDK11B-205ENST00000611150 BAZ1AQ9NRL2 1556 aaPredicted RBP24.16■■□□□ 1.46
CDK11B-205ENST00000611150 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
CDK11B-205ENST00000611150 RTL5Q5HYW3 569 aaPredicted RBP24.15■■□□□ 1.46
CDK11B-205ENST00000611150 ATAD2BQ9ULI0 1458 aa24.14■■□□□ 1.45
CDK11B-205ENST00000611150 ITGAEP38570 1179 aa24.13■■□□□ 1.45
CDK11B-205ENST00000611150 CDK11AQ9UQ88 783 aaPredicted RBP24.12■■□□□ 1.45
CDK11B-205ENST00000611150 SMARCA2P51531 1590 aa24.11■■□□□ 1.45
CDK11B-205ENST00000611150 NOP58Q9Y2X3 529 aaKnown RBP24.07■■□□□ 1.44
CDK11B-205ENST00000611150 RSPH6AQ9H0K4 717 aa24.06■■□□□ 1.44
CDK11B-205ENST00000611150 VSIG10Q8N0Z9 540 aa24.05■■□□□ 1.44
CDK11B-205ENST00000611150 PDE4CQ08493 712 aa24.03■■□□□ 1.44
CDK11B-205ENST00000611150 HMGXB3Q12766 1538 aa24.02■■□□□ 1.44
CDK11B-205ENST00000611150 MROH2BQ7Z745 1585 aa23.99■■□□□ 1.43
CDK11B-205ENST00000611150 C11orf95C9JLR9 678 aaPredicted RBP23.99■■□□□ 1.43
CDK11B-205ENST00000611150 PEG3Q9GZU2 1588 aa23.98■■□□□ 1.43
CDK11B-205ENST00000611150 FGD1P98174 961 aa23.95■■□□□ 1.43
CDK11B-205ENST00000611150 TIMELESSQ9UNS1 1208 aa23.94■■□□□ 1.42
CDK11B-205ENST00000611150 BAZ1BQ9UIG0 1483 aaKnown RBP23.93■■□□□ 1.42
CDK11B-205ENST00000611150 PDIA4P13667 645 aaKnown RBP23.92■■□□□ 1.42
CDK11B-205ENST00000611150 A0A0U1RQG5 324 aaPredicted RBP23.86■■□□□ 1.41
CDK11B-205ENST00000611150 AAMPQ13685 434 aa23.82■■□□□ 1.4
CDK11B-205ENST00000611150 PAK3O75914 559 aaPredicted RBP23.79■■□□□ 1.4
CDK11B-205ENST00000611150 RBM10P98175 930 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms