RNA–Protein interactions for RNA: ENST00000610356.4

RDH13-223, Transcript of retinol dehydrogenase 13, humanhuman

TSL 1 (best) BASIC

Gene RDH13, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-223ENST00000610356 SPATA8Q6RVD6 105 aa8.96□□□□□ -0.97
RDH13-223ENST00000610356 HERC2O95714 4834 aa8.93□□□□□ -0.98
RDH13-223ENST00000610356 ABCA13Q86UQ4 5058 aa8.91□□□□□ -0.98
RDH13-223ENST00000610356 UQCR11O14957 56 aa8.9□□□□□ -0.98
RDH13-223ENST00000610356 COX6B2Q6YFQ2 88 aa8.88□□□□□ -0.99
RDH13-223ENST00000610356 SEC61GP60059 68 aa8.87□□□□□ -0.99
RDH13-223ENST00000610356 KRTAP3-1Q9BYR8 98 aa8.87□□□□□ -0.99
RDH13-223ENST00000610356 MIR22HGQ0VDD5 57 aa8.86□□□□□ -0.99
RDH13-223ENST00000610356 LPAP08519 4548 aa8.76□□□□□ -1.01
RDH13-223ENST00000610356 LRP2P98164 4655 aa8.74□□□□□ -1.01
RDH13-223ENST00000610356 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
RDH13-223ENST00000610356 SEC61BP60468 96 aaKnown RBP8.69□□□□□ -1.02
RDH13-223ENST00000610356 PCLOQ9Y6V0 5065 aa8.61□□□□□ -1.03
RDH13-223ENST00000610356 H1FX-AS1Q4G0G2 97 aa8.59□□□□□ -1.03
RDH13-223ENST00000610356 S4R3F8 94 aa8.59□□□□□ -1.03
RDH13-223ENST00000610356 A0A1B0GU33 70 aa8.58□□□□□ -1.04
RDH13-223ENST00000610356 H0YAA0 97 aa8.58□□□□□ -1.04
RDH13-223ENST00000610356 PRAC1Q96KF2 57 aa8.54□□□□□ -1.04
RDH13-223ENST00000610356 KRTAP3-3Q9BYR6 98 aa8.54□□□□□ -1.04
RDH13-223ENST00000610356 ADM2Q7Z4H4 148 aa8.53□□□□□ -1.04
RDH13-223ENST00000610356 MUC17Q685J3 4493 aa8.5□□□□□ -1.05
RDH13-223ENST00000610356 KRTAP4-1Q9BYQ7 146 aa8.46□□□□□ -1.05
RDH13-223ENST00000610356 HERC1Q15751 4861 aa8.37□□□□□ -1.07
RDH13-223ENST00000610356 KRTAP10-6P60371 365 aaPredicted RBP8.37□□□□□ -1.07
RDH13-223ENST00000610356 CSAG1Q6PB30 78 aa8.37□□□□□ -1.07
RDH13-223ENST00000610356 HMCN2Q8NDA2 5059 aa8.35□□□□□ -1.07
RDH13-223ENST00000610356 LINC01554Q52M75 96 aa8.32□□□□□ -1.08
RDH13-223ENST00000610356 KRTAP3-2Q9BYR7 98 aa8.32□□□□□ -1.08
RDH13-223ENST00000610356 K7ERS5 55 aa8.3□□□□□ -1.08
RDH13-223ENST00000610356 KRTAP19-2Q3LHN2 52 aa8.27□□□□□ -1.09
RDH13-223ENST00000610356 P0C880 135 aa8.21□□□□□ -1.09
RDH13-223ENST00000610356 KRTAP13-4Q3LI77 160 aa8.21□□□□□ -1.1
RDH13-223ENST00000610356 KRTAP25-1Q3LHN0 102 aa8.18□□□□□ -1.1
RDH13-223ENST00000610356 ROMO1P60602 79 aa8.11□□□□□ -1.11
RDH13-223ENST00000610356 MUC2Q02817 5179 aa8.1□□□□□ -1.11
RDH13-223ENST00000610356 A0A0D9SG42 100 aa8.07□□□□□ -1.12
RDH13-223ENST00000610356 M0QZ58 72 aa8.03□□□□□ -1.12
RDH13-223ENST00000610356 FLGP20930 4061 aaPredicted RBP8.01□□□□□ -1.13
RDH13-223ENST00000610356 LCE2CQ5TA81 110 aa7.99□□□□□ -1.13
RDH13-223ENST00000610356 KRTAP12-2P59991 146 aa7.94□□□□□ -1.14
RDH13-223ENST00000610356 R4GN34 69 aa7.93□□□□□ -1.14
RDH13-223ENST00000610356 KRTAP12-1P59990 96 aa7.93□□□□□ -1.14
RDH13-223ENST00000610356 CRIPTQ9P021 101 aa7.93□□□□□ -1.14
RDH13-223ENST00000610356 UBR4Q5T4S7 5183 aa7.91□□□□□ -1.14
RDH13-223ENST00000610356 RNF213Q63HN8 5207 aa7.89□□□□□ -1.15
RDH13-223ENST00000610356 LORP23490 312 aaPredicted RBP7.87□□□□□ -1.15
RDH13-223ENST00000610356 SPINT4Q6UDR6 99 aa7.84□□□□□ -1.16
RDH13-223ENST00000610356 MT1HP80294 61 aa7.82□□□□□ -1.16
RDH13-223ENST00000610356 M0R2T5 61 aa7.81□□□□□ -1.16
RDH13-223ENST00000610356 FAT4Q6V0I7 4981 aa7.8□□□□□ -1.16
RDH13-223ENST00000610356 C10orf95Q9H7T3 257 aa7.7□□□□□ -1.18
RDH13-223ENST00000610356 MT2AP02795 61 aa7.57□□□□□ -1.2
RDH13-223ENST00000610356 KRTAP9-8Q9BYQ0 159 aa7.56□□□□□ -1.2
RDH13-223ENST00000610356 MT1FP04733 61 aa7.54□□□□□ -1.2
RDH13-223ENST00000610356 KRTAP10-10P60014 251 aa7.53□□□□□ -1.2
RDH13-223ENST00000610356 SPRR2GQ9BYE4 73 aa7.53□□□□□ -1.2
RDH13-223ENST00000610356 KRTAP19-1Q8IUB9 90 aa7.48□□□□□ -1.21
RDH13-223ENST00000610356 CAMK2N1Q7Z7J9 78 aa7.47□□□□□ -1.21
RDH13-223ENST00000610356 KRTAP15-1Q3LI76 137 aa7.46□□□□□ -1.21
RDH13-223ENST00000610356 H3BS24 57 aa7.4□□□□□ -1.23
RDH13-223ENST00000610356 PLAC4Q8WY50 150 aa7.37□□□□□ -1.23
RDH13-223ENST00000610356 LCE2AQ5TA79 106 aaPredicted RBP7.33□□□□□ -1.24
RDH13-223ENST00000610356 KRTAP19-8Q3LI54 63 aa7.29□□□□□ -1.24
RDH13-223ENST00000610356 KRTAP9-3Q9BYQ3 159 aa7.27□□□□□ -1.25
RDH13-223ENST00000610356 PP632Q6XCG6 107 aa7.27□□□□□ -1.25
RDH13-223ENST00000610356 MT1BP07438 61 aa7.18□□□□□ -1.26
RDH13-223ENST00000610356 NDUFAF8A1L188 74 aa7.15□□□□□ -1.26
RDH13-223ENST00000610356 TNP1P09430 55 aa7.13□□□□□ -1.27
RDH13-223ENST00000610356 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
RDH13-223ENST00000610356 LCE2BO14633 110 aa7.03□□□□□ -1.28
RDH13-223ENST00000610356 MT1XP80297 61 aa7□□□□□ -1.29
RDH13-223ENST00000610356 KRTAP10-5P60370 271 aa6.99□□□□□ -1.29
RDH13-223ENST00000610356 PRO2289Q9P1D8 64 aa6.92□□□□□ -1.3
RDH13-223ENST00000610356 LUZP6Q538Z0 58 aa6.79□□□□□ -1.32
RDH13-223ENST00000610356 LCE3AQ5TA76 89 aa6.79□□□□□ -1.32
RDH13-223ENST00000610356 SPRR5A0A1B0GTR4 108 aa6.76□□□□□ -1.33
RDH13-223ENST00000610356 KRTAP10-7P60409 375 aaPredicted RBP6.74□□□□□ -1.33
RDH13-223ENST00000610356 KRTAP10-12P60413 245 aa6.74□□□□□ -1.33
RDH13-223ENST00000610356 USH2AO75445 5202 aa6.73□□□□□ -1.33
RDH13-223ENST00000610356 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
RDH13-223ENST00000610356 LCE2DQ5TA82 110 aaPredicted RBP6.56□□□□□ -1.36
RDH13-223ENST00000610356 KRTAP19-6Q3LI70 58 aa6.54□□□□□ -1.36
RDH13-223ENST00000610356 KRTAP9-2Q9BYQ4 174 aa6.53□□□□□ -1.36
RDH13-223ENST00000610356 SSPOA2VEC9 5147 aa6.51□□□□□ -1.37
RDH13-223ENST00000610356 KRTAP12-3P60328 96 aa6.5□□□□□ -1.37
RDH13-223ENST00000610356 FSIP2Q5CZC0 6907 aa6.47□□□□□ -1.37
RDH13-223ENST00000610356 A0A0A0MQY5 61 aa6.41□□□□□ -1.38
RDH13-223ENST00000610356 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
RDH13-223ENST00000610356 KRTAP4-8Q9BYQ9 185 aa6.41□□□□□ -1.38
RDH13-223ENST00000610356 KRTAP19-5Q3LI72 72 aa6.39□□□□□ -1.39
RDH13-223ENST00000610356 KMT2DO14686 5537 aa6.31□□□□□ -1.4
RDH13-223ENST00000610356 KRTAP19-7Q3SYF9 63 aa6.24□□□□□ -1.41
RDH13-223ENST00000610356 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.41
RDH13-223ENST00000610356 KRTAP9-6A0A140TA67 174 aa6.17□□□□□ -1.42
RDH13-223ENST00000610356 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.42
RDH13-223ENST00000610356 MT1EP04732 61 aa6.12□□□□□ -1.43
RDH13-223ENST00000610356 LCE3CQ5T5A8 94 aa6.09□□□□□ -1.44
RDH13-223ENST00000610356 MT1LQ93083 61 aa6.03□□□□□ -1.44
RDH13-223ENST00000610356 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
RDH13-223ENST00000610356 MACF1Q9UPN3 7388 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms