RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 KRTAP3-2Q9BYR7 98 aa8.25□□□□□ -1.09
SYDE1-204ENST00000600440 PKD1P98161 4303 aa8.24□□□□□ -1.09
SYDE1-204ENST00000600440 RPS29P62273 56 aaKnown RBP8.22□□□□□ -1.09
SYDE1-204ENST00000600440 FAT1Q14517 4588 aa8.22□□□□□ -1.09
SYDE1-204ENST00000600440 PKHD1P08F94 4074 aa8.21□□□□□ -1.1
SYDE1-204ENST00000600440 KRTAP10-8P60410 259 aa8.16□□□□□ -1.1
SYDE1-204ENST00000600440 MYCBP2O75592 4640 aa8.11□□□□□ -1.11
SYDE1-204ENST00000600440 A0A0A0MQY5 61 aa8.1□□□□□ -1.11
SYDE1-204ENST00000600440 KRTAP12-1P59990 96 aa8.09□□□□□ -1.11
SYDE1-204ENST00000600440 SACSQ9NZJ4 4579 aa8.08□□□□□ -1.12
SYDE1-204ENST00000600440 DYNC1H1Q14204 4646 aaKnown RBP8.07□□□□□ -1.12
SYDE1-204ENST00000600440 HSPG2P98160 4391 aa8□□□□□ -1.13
SYDE1-204ENST00000600440 XP32Q5T750 250 aa7.99□□□□□ -1.13
SYDE1-204ENST00000600440 APOBP04114 4563 aaKnown RBP7.95□□□□□ -1.14
SYDE1-204ENST00000600440 LUZP6Q538Z0 58 aa7.94□□□□□ -1.14
SYDE1-204ENST00000600440 LRP1Q07954 4544 aaKnown RBP7.92□□□□□ -1.14
SYDE1-204ENST00000600440 PKHD1L1Q86WI1 4243 aa7.88□□□□□ -1.15
SYDE1-204ENST00000600440 PLAC4Q8WY50 150 aa7.86□□□□□ -1.15
SYDE1-204ENST00000600440 M0QZ58 72 aa7.85□□□□□ -1.15
SYDE1-204ENST00000600440 KRTAP10-4P60372 401 aaPredicted RBP7.83□□□□□ -1.16
SYDE1-204ENST00000600440 FAT3Q8TDW7 4589 aa7.82□□□□□ -1.16
SYDE1-204ENST00000600440 R4GN34 69 aa7.76□□□□□ -1.17
SYDE1-204ENST00000600440 LPAP08519 4548 aa7.76□□□□□ -1.17
SYDE1-204ENST00000600440 KMT2CQ8NEZ4 4911 aaKnown RBP7.68□□□□□ -1.18
SYDE1-204ENST00000600440 LRP2P98164 4655 aa7.63□□□□□ -1.19
SYDE1-204ENST00000600440 A0A1B0GVY2 172 aa7.63□□□□□ -1.19
SYDE1-204ENST00000600440 TNXBP22105 4242 aa7.58□□□□□ -1.2
SYDE1-204ENST00000600440 LORP23490 312 aaPredicted RBP7.55□□□□□ -1.2
SYDE1-204ENST00000600440 Q5VSD8 79 aa7.54□□□□□ -1.2
SYDE1-204ENST00000600440 CAMK2N1Q7Z7J9 78 aa7.51□□□□□ -1.21
SYDE1-204ENST00000600440 RYR2Q92736 4967 aa7.43□□□□□ -1.22
SYDE1-204ENST00000600440 KIAA1109Q2LD37 5005 aa7.41□□□□□ -1.22
SYDE1-204ENST00000600440 KRTAP17-1Q9BYP8 105 aa7.34□□□□□ -1.23
SYDE1-204ENST00000600440 RYR3Q15413 4870 aa7.33□□□□□ -1.24
SYDE1-204ENST00000600440 RYR1P21817 5038 aa7.32□□□□□ -1.24
SYDE1-204ENST00000600440 PP632Q6XCG6 107 aa7.31□□□□□ -1.24
SYDE1-204ENST00000600440 MT1HL1P0DM35 61 aa7.27□□□□□ -1.25
SYDE1-204ENST00000600440 KRTAP21-3Q3LHN1 58 aa7.27□□□□□ -1.25
SYDE1-204ENST00000600440 ABCA13Q86UQ4 5058 aa7.19□□□□□ -1.26
SYDE1-204ENST00000600440 EPPK1P58107 5090 aaKnown RBP7.12□□□□□ -1.27
SYDE1-204ENST00000600440 TNP1P09430 55 aa7.12□□□□□ -1.27
SYDE1-204ENST00000600440 MUC2Q02817 5179 aa7.05□□□□□ -1.28
SYDE1-204ENST00000600440 KRTAP4-1Q9BYQ7 146 aa7.04□□□□□ -1.28
SYDE1-204ENST00000600440 SEC61BP60468 96 aaKnown RBP7.02□□□□□ -1.29
SYDE1-204ENST00000600440 KRTAP4-5Q9BYR2 181 aa6.98□□□□□ -1.29
SYDE1-204ENST00000600440 MUC17Q685J3 4493 aa6.96□□□□□ -1.3
SYDE1-204ENST00000600440 SPRR5A0A1B0GTR4 108 aa6.92□□□□□ -1.3
SYDE1-204ENST00000600440 PRO2289Q9P1D8 64 aa6.81□□□□□ -1.32
SYDE1-204ENST00000600440 J3QL48 77 aa6.79□□□□□ -1.32
SYDE1-204ENST00000600440 KRTAP19-2Q3LHN2 52 aa6.73□□□□□ -1.33
SYDE1-204ENST00000600440 LCE3AQ5TA76 89 aa6.73□□□□□ -1.33
SYDE1-204ENST00000600440 HERC2O95714 4834 aa6.73□□□□□ -1.33
SYDE1-204ENST00000600440 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.33
SYDE1-204ENST00000600440 FAT4Q6V0I7 4981 aa6.67□□□□□ -1.34
SYDE1-204ENST00000600440 PCLOQ9Y6V0 5065 aa6.66□□□□□ -1.34
SYDE1-204ENST00000600440 HERC1Q15751 4861 aa6.63□□□□□ -1.35
SYDE1-204ENST00000600440 FLGP20930 4061 aaPredicted RBP6.61□□□□□ -1.35
SYDE1-204ENST00000600440 INE1O15225 51 aa6.57□□□□□ -1.36
SYDE1-204ENST00000600440 RNF213Q63HN8 5207 aa6.53□□□□□ -1.36
SYDE1-204ENST00000600440 M0R2T5 61 aa6.51□□□□□ -1.37
SYDE1-204ENST00000600440 KRTAP19-1Q8IUB9 90 aa6.44□□□□□ -1.38
SYDE1-204ENST00000600440 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
SYDE1-204ENST00000600440 HMCN2Q8NDA2 5059 aa6.36□□□□□ -1.39
SYDE1-204ENST00000600440 KRTAP10-10P60014 251 aa6.34□□□□□ -1.39
SYDE1-204ENST00000600440 KRTAP12-3P60328 96 aa6.34□□□□□ -1.39
SYDE1-204ENST00000600440 KRTAP8-1Q8IUC2 63 aa6.33□□□□□ -1.4
SYDE1-204ENST00000600440 UBR4Q5T4S7 5183 aa6.3□□□□□ -1.4
SYDE1-204ENST00000600440 BIRC6Q9NR09 4857 aa6.29□□□□□ -1.4
SYDE1-204ENST00000600440 KRTAP10-12P60413 245 aa6.24□□□□□ -1.41
SYDE1-204ENST00000600440 MT1FP04733 61 aa6.19□□□□□ -1.42
SYDE1-204ENST00000600440 LCE2CQ5TA81 110 aa6.19□□□□□ -1.42
SYDE1-204ENST00000600440 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
SYDE1-204ENST00000600440 MT2AP02795 61 aa6.12□□□□□ -1.43
SYDE1-204ENST00000600440 KRTAP10-7P60409 375 aaPredicted RBP6.12□□□□□ -1.43
SYDE1-204ENST00000600440 MT1XP80297 61 aa6.11□□□□□ -1.43
SYDE1-204ENST00000600440 MT1HP80294 61 aa6.06□□□□□ -1.44
SYDE1-204ENST00000600440 MT1BP07438 61 aa6.02□□□□□ -1.45
SYDE1-204ENST00000600440 KMT2DO14686 5537 aa6.01□□□□□ -1.45
SYDE1-204ENST00000600440 KRTAP9-8Q9BYQ0 159 aa5.95□□□□□ -1.46
SYDE1-204ENST00000600440 KRTAP19-8Q3LI54 63 aa5.95□□□□□ -1.46
SYDE1-204ENST00000600440 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
SYDE1-204ENST00000600440 USH2AO75445 5202 aa5.93□□□□□ -1.46
SYDE1-204ENST00000600440 LCE3CQ5T5A8 94 aa5.93□□□□□ -1.46
SYDE1-204ENST00000600440 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.47
SYDE1-204ENST00000600440 FSIP2Q5CZC0 6907 aa5.82□□□□□ -1.48
SYDE1-204ENST00000600440 KRTAP4-7Q9BYR0 210 aa5.78□□□□□ -1.48
SYDE1-204ENST00000600440 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
SYDE1-204ENST00000600440 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
SYDE1-204ENST00000600440 KRTAP9-3Q9BYQ3 159 aa5.65□□□□□ -1.51
SYDE1-204ENST00000600440 KRTAP2-3P0C7H8 128 aa5.61□□□□□ -1.51
SYDE1-204ENST00000600440 KRTAP2-4Q9BYR9 128 aa5.61□□□□□ -1.51
SYDE1-204ENST00000600440 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
SYDE1-204ENST00000600440 LCE2BO14633 110 aa5.46□□□□□ -1.54
SYDE1-204ENST00000600440 KRTAP19-7Q3SYF9 63 aa5.42□□□□□ -1.54
SYDE1-204ENST00000600440 CRCT1Q9UGL9 99 aa5.4□□□□□ -1.55
SYDE1-204ENST00000600440 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
SYDE1-204ENST00000600440 KRTAP12-4P60329 112 aa5.34□□□□□ -1.55
SYDE1-204ENST00000600440 MT1LQ93083 61 aa5.31□□□□□ -1.56
SYDE1-204ENST00000600440 KRTAP4-3Q9BYR4 195 aa5.27□□□□□ -1.57
SYDE1-204ENST00000600440 DSTQ03001 7570 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms