RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777		J3QL48	77 aa		5.44	□□□□□ -1.54
FARP1-222	ENST00000597777	KRTAP13-3	Q3SY46	172 aa		5.44	□□□□□ -1.54
FARP1-222	ENST00000597777	BIRC6	Q9NR09	4857 aa		5.43	□□□□□ -1.54
FARP1-222	ENST00000597777	FAT3	Q8TDW7	4589 aa		5.43	□□□□□ -1.54
FARP1-222	ENST00000597777	TNXB	P22105	4242 aa		5.43	□□□□□ -1.54
FARP1-222	ENST00000597777	DMAC1	Q96GE9	116 aa		5.42	□□□□□ -1.54
FARP1-222	ENST00000597777	MYCBP2	O75592	4640 aa		5.39	□□□□□ -1.55
FARP1-222	ENST00000597777	COX6B2	Q6YFQ2	88 aa		5.37	□□□□□ -1.55
FARP1-222	ENST00000597777	HERC2	O95714	4834 aa		5.37	□□□□□ -1.55
FARP1-222	ENST00000597777	MT1HL1	P0DM35	61 aa		5.36	□□□□□ -1.55
FARP1-222	ENST00000597777	ROMO1	P60602	79 aa		5.36	□□□□□ -1.55
FARP1-222	ENST00000597777	KRTAP25-1	Q3LHN0	102 aa		5.35	□□□□□ -1.55
FARP1-222	ENST00000597777	KRTAP4-5	Q9BYR2	181 aa		5.35	□□□□□ -1.55
FARP1-222	ENST00000597777	LRP1	Q07954	4544 aa	Known RBP	5.35	□□□□□ -1.55
FARP1-222	ENST00000597777	NDUFAF8	A1L188	74 aa		5.31	□□□□□ -1.56
FARP1-222	ENST00000597777		A8MUU9	505 aa		5.27	□□□□□ -1.57
FARP1-222	ENST00000597777	ABCA13	Q86UQ4	5058 aa		5.25	□□□□□ -1.57
FARP1-222	ENST00000597777	KRTAP16-1	A8MUX0	517 aa		5.24	□□□□□ -1.57
FARP1-222	ENST00000597777	H1FX-AS1	Q4G0G2	97 aa		5.23	□□□□□ -1.57
FARP1-222	ENST00000597777		S4R3F8	94 aa		5.21	□□□□□ -1.58
FARP1-222	ENST00000597777	RPL37	P61927	97 aa	Known RBP	5.19	□□□□□ -1.58
FARP1-222	ENST00000597777	C20orf166-AS1	Q96NR2	134 aa		5.18	□□□□□ -1.58
FARP1-222	ENST00000597777	TPRXL	Q17RH7	258 aa		5.16	□□□□□ -1.58
FARP1-222	ENST00000597777		A0A0A0MQY5	61 aa		5.15	□□□□□ -1.59
FARP1-222	ENST00000597777	LUZP6	Q538Z0	58 aa		5.14	□□□□□ -1.59
FARP1-222	ENST00000597777		H0YAA0	97 aa		5.13	□□□□□ -1.59
FARP1-222	ENST00000597777	C10orf95	Q9H7T3	257 aa		5.13	□□□□□ -1.59
FARP1-222	ENST00000597777		M0R2T5	61 aa		5.12	□□□□□ -1.59
FARP1-222	ENST00000597777		R4GN34	69 aa		5.12	□□□□□ -1.59
FARP1-222	ENST00000597777		M0QZ58	72 aa		5.11	□□□□□ -1.59
FARP1-222	ENST00000597777	XP32	Q5T750	250 aa		5.11	□□□□□ -1.59
FARP1-222	ENST00000597777	PCLO	Q9Y6V0	5065 aa		5.09	□□□□□ -1.59
FARP1-222	ENST00000597777	CAMK2N1	Q7Z7J9	78 aa		5.09	□□□□□ -1.6
FARP1-222	ENST00000597777		P0C880	135 aa		5.07	□□□□□ -1.6
FARP1-222	ENST00000597777	KRTAP3-1	Q9BYR8	98 aa		5.03	□□□□□ -1.6
FARP1-222	ENST00000597777	LPA	P08519	4548 aa		4.98	□□□□□ -1.61
FARP1-222	ENST00000597777	MUC17	Q685J3	4493 aa		4.97	□□□□□ -1.61
FARP1-222	ENST00000597777	SEC61B	P60468	96 aa	Known RBP	4.97	□□□□□ -1.61
FARP1-222	ENST00000597777	HMCN2	Q8NDA2	5059 aa		4.94	□□□□□ -1.62
FARP1-222	ENST00000597777	HERC1	Q15751	4861 aa		4.93	□□□□□ -1.62
FARP1-222	ENST00000597777	LRP2	P98164	4655 aa		4.93	□□□□□ -1.62
FARP1-222	ENST00000597777	KRTAP13-4	Q3LI77	160 aa		4.88	□□□□□ -1.63
FARP1-222	ENST00000597777	KRTAP12-2	P59991	146 aa		4.82	□□□□□ -1.64
FARP1-222	ENST00000597777	KRTAP4-1	Q9BYQ7	146 aa		4.8	□□□□□ -1.64
FARP1-222	ENST00000597777	PLAC4	Q8WY50	150 aa		4.78	□□□□□ -1.64
FARP1-222	ENST00000597777	KRTAP10-6	P60371	365 aa	Predicted RBP	4.76	□□□□□ -1.65
FARP1-222	ENST00000597777	MUC2	Q02817	5179 aa		4.75	□□□□□ -1.65
FARP1-222	ENST00000597777	KRTAP3-3	Q9BYR6	98 aa		4.73	□□□□□ -1.65
FARP1-222	ENST00000597777	KRTAP3-2	Q9BYR7	98 aa		4.72	□□□□□ -1.65
FARP1-222	ENST00000597777	KRTAP19-2	Q3LHN2	52 aa		4.71	□□□□□ -1.66
FARP1-222	ENST00000597777	KRTAP15-1	Q3LI76	137 aa		4.67	□□□□□ -1.66
FARP1-222	ENST00000597777	KRTAP12-1	P59990	96 aa		4.66	□□□□□ -1.66
FARP1-222	ENST00000597777	UBR4	Q5T4S7	5183 aa		4.64	□□□□□ -1.67
FARP1-222	ENST00000597777	RNF213	Q63HN8	5207 aa		4.64	□□□□□ -1.67
FARP1-222	ENST00000597777	LOR	P23490	312 aa	Predicted RBP	4.64	□□□□□ -1.67
FARP1-222	ENST00000597777	FLG	P20930	4061 aa	Predicted RBP	4.61	□□□□□ -1.67
FARP1-222	ENST00000597777	LCE2C	Q5TA81	110 aa		4.6	□□□□□ -1.67
FARP1-222	ENST00000597777	KRTAP10-10	P60014	251 aa		4.6	□□□□□ -1.67
FARP1-222	ENST00000597777	FSIP2	Q5CZC0	6907 aa		4.58	□□□□□ -1.68
FARP1-222	ENST00000597777	FAT4	Q6V0I7	4981 aa		4.55	□□□□□ -1.68
FARP1-222	ENST00000597777	MT1H	P80294	61 aa		4.52	□□□□□ -1.69
FARP1-222	ENST00000597777	TNP1	P09430	55 aa		4.5	□□□□□ -1.69
FARP1-222	ENST00000597777	PP632	Q6XCG6	107 aa		4.45	□□□□□ -1.7
FARP1-222	ENST00000597777	LCE2A	Q5TA79	106 aa	Predicted RBP	4.39	□□□□□ -1.71
FARP1-222	ENST00000597777	OBSCN	Q5VST9	7968 aa		4.38	□□□□□ -1.71
FARP1-222	ENST00000597777	KRTAP9-8	Q9BYQ0	159 aa		4.35	□□□□□ -1.71
FARP1-222	ENST00000597777	MT2A	P02795	61 aa		4.32	□□□□□ -1.72
FARP1-222	ENST00000597777	MT1F	P04733	61 aa		4.29	□□□□□ -1.72
FARP1-222	ENST00000597777	SPRR2G	Q9BYE4	73 aa		4.26	□□□□□ -1.73
FARP1-222	ENST00000597777	KRTAP19-1	Q8IUB9	90 aa		4.21	□□□□□ -1.74
FARP1-222	ENST00000597777	KRTAP9-3	Q9BYQ3	159 aa		4.2	□□□□□ -1.74
FARP1-222	ENST00000597777	USH2A	O75445	5202 aa		4.16	□□□□□ -1.74
FARP1-222	ENST00000597777	KRTAP19-8	Q3LI54	63 aa		4.15	□□□□□ -1.74
FARP1-222	ENST00000597777	PRO2289	Q9P1D8	64 aa		4.12	□□□□□ -1.75
FARP1-222	ENST00000597777	LCE3A	Q5TA76	89 aa		4.11	□□□□□ -1.75
FARP1-222	ENST00000597777	SYNE1	Q8NF91	8797 aa	Known RBP	4.06	□□□□□ -1.76
FARP1-222	ENST00000597777	LCE2B	O14633	110 aa		4.06	□□□□□ -1.76
FARP1-222	ENST00000597777	MT1B	P07438	61 aa		4.06	□□□□□ -1.76
FARP1-222	ENST00000597777	DST	Q03001	7570 aa	Known RBP	4.05	□□□□□ -1.76
FARP1-222	ENST00000597777	CRCT1	Q9UGL9	99 aa		4.05	□□□□□ -1.76
FARP1-222	ENST00000597777	LCE2D	Q5TA82	110 aa	Predicted RBP	4.04	□□□□□ -1.76
FARP1-222	ENST00000597777	KMT2D	O14686	5537 aa		4.01	□□□□□ -1.77
FARP1-222	ENST00000597777	INE1	O15225	51 aa		4.01	□□□□□ -1.77
FARP1-222	ENST00000597777	SPRR5	A0A1B0GTR4	108 aa		4	□□□□□ -1.77
FARP1-222	ENST00000597777	KRTAP10-12	P60413	245 aa		3.99	□□□□□ -1.77
FARP1-222	ENST00000597777	KRTAP23-1	A1A580	65 aa		3.97	□□□□□ -1.77
FARP1-222	ENST00000597777	KRTAP12-3	P60328	96 aa		3.94	□□□□□ -1.78
FARP1-222	ENST00000597777	MT1X	P80297	61 aa		3.92	□□□□□ -1.78
FARP1-222	ENST00000597777	KRTAP10-5	P60370	271 aa		3.92	□□□□□ -1.78
FARP1-222	ENST00000597777	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.9	□□□□□ -1.79
FARP1-222	ENST00000597777	KRTAP19-6	Q3LI70	58 aa		3.88	□□□□□ -1.79
FARP1-222	ENST00000597777	KRTAP10-7	P60409	375 aa	Predicted RBP	3.85	□□□□□ -1.79
FARP1-222	ENST00000597777	SSPO	A2VEC9	5147 aa		3.84	□□□□□ -1.79
FARP1-222	ENST00000597777	KRTAP9-2	Q9BYQ4	174 aa		3.84	□□□□□ -1.79
FARP1-222	ENST00000597777	KRTAP4-8	A0A0G2JLE6	195 aa		3.82	□□□□□ -1.8
FARP1-222	ENST00000597777	KRTAP4-8	Q9BYQ9	185 aa		3.82	□□□□□ -1.8
FARP1-222	ENST00000597777	KRTAP19-5	Q3LI72	72 aa		3.74	□□□□□ -1.81
FARP1-222	ENST00000597777	KRTAP4-7	Q9BYR0	210 aa		3.69	□□□□□ -1.82
FARP1-222	ENST00000597777	SYNE2	Q8WXH0	6885 aa	Known RBP	3.68	□□□□□ -1.82
FARP1-222	ENST00000597777	KRTAP8-1	Q8IUC2	63 aa		3.66	□□□□□ -1.82

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