RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-222ENST00000597777 NISCHQ9Y2I1 1504 aa21.85■■□□□ 1.09
FARP1-222ENST00000597777 CCDC180Q9P1Z9 1646 aa19.24■□□□□ 0.67
FARP1-222ENST00000597777 ZCCHC6Q5VYS8 1495 aaKnown RBP18.35■□□□□ 0.53
FARP1-222ENST00000597777 DCAF1Q9Y4B6 1507 aa18.18■□□□□ 0.5
FARP1-222ENST00000597777 ABCC9O60706 1549 aa18.05■□□□□ 0.48
FARP1-222ENST00000597777 MYO15BQ96JP2 1530 aa18.04■□□□□ 0.48
FARP1-222ENST00000597777 NACADO15069 1562 aa17.9■□□□□ 0.46
FARP1-222ENST00000597777 DCAF8L2P0C7V8 631 aa17.8■□□□□ 0.44
FARP1-222ENST00000597777 RB1CC1Q8TDY2 1594 aa17.75■□□□□ 0.43
FARP1-222ENST00000597777 SCRIBQ14160 1630 aa17.49■□□□□ 0.39
FARP1-222ENST00000597777 SHROOM4Q9ULL8 1493 aa17.48■□□□□ 0.39
FARP1-222ENST00000597777 UNC13AQ9UPW8 1703 aa17.37■□□□□ 0.37
FARP1-222ENST00000597777 BICRAQ9NZM4 1560 aa17.17■□□□□ 0.34
FARP1-222ENST00000597777 SUPT5HO00267 1087 aaKnown RBP17.15■□□□□ 0.34
FARP1-222ENST00000597777 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
FARP1-222ENST00000597777 BAZ1AQ9NRL2 1556 aaPredicted RBP16.91■□□□□ 0.3
FARP1-222ENST00000597777 CECR2Q9BXF3 1484 aa16.88■□□□□ 0.29
FARP1-222ENST00000597777 RSF1Q96T23 1441 aaPredicted RBP16.84■□□□□ 0.29
FARP1-222ENST00000597777 SMARCA4P51532 1647 aa16.84■□□□□ 0.29
FARP1-222ENST00000597777 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
FARP1-222ENST00000597777 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
FARP1-222ENST00000597777 PEG3Q9GZU2 1588 aa16.71■□□□□ 0.27
FARP1-222ENST00000597777 WIZO95785 1651 aa16.68■□□□□ 0.26
FARP1-222ENST00000597777 EIF4G1Q04637 1599 aaKnown RBP16.66■□□□□ 0.26
FARP1-222ENST00000597777 SMARCA2P51531 1590 aa16.61■□□□□ 0.25
FARP1-222ENST00000597777 TOP2AP11388 1531 aaKnown RBP16.58■□□□□ 0.24
FARP1-222ENST00000597777 ATAD2BQ9ULI0 1458 aa16.55■□□□□ 0.24
FARP1-222ENST00000597777 HMGXB3Q12766 1538 aa16.49■□□□□ 0.23
FARP1-222ENST00000597777 NCAPD3P42695 1498 aa16.47■□□□□ 0.23
FARP1-222ENST00000597777 BAZ1BQ9UIG0 1483 aaKnown RBP16.45■□□□□ 0.22
FARP1-222ENST00000597777 CC2D2AQ9P2K1 1620 aa16.43■□□□□ 0.22
FARP1-222ENST00000597777 CCDC88BA6NC98 1476 aa16.33■□□□□ 0.2
FARP1-222ENST00000597777 FAM9AQ8IZU1 332 aaPredicted RBP16.19■□□□□ 0.18
FARP1-222ENST00000597777 PRDM2Q13029 1718 aa16.08■□□□□ 0.17
FARP1-222ENST00000597777 TTBK1Q5TCY1 1321 aaPredicted RBP16.06■□□□□ 0.16
FARP1-222ENST00000597777 PCGF6Q9BYE7 350 aa16.06■□□□□ 0.16
FARP1-222ENST00000597777 CFTRP13569 1480 aa16.06■□□□□ 0.16
FARP1-222ENST00000597777 CHIC1Q5VXU3 224 aa16.06■□□□□ 0.16
FARP1-222ENST00000597777 CADPSQ9ULU8 1353 aa15.99■□□□□ 0.15
FARP1-222ENST00000597777 LAMC3Q9Y6N6 1575 aa15.97■□□□□ 0.15
FARP1-222ENST00000597777 DNAJC5BQ9UF47 199 aa15.95■□□□□ 0.14
FARP1-222ENST00000597777 ABCC8Q09428 1581 aa15.9■□□□□ 0.14
FARP1-222ENST00000597777 PPARGC1BQ86YN6 1023 aaKnown RBP15.87■□□□□ 0.13
FARP1-222ENST00000597777 WRNQ14191 1432 aaPredicted RBP eCLIP15.86■□□□□ 0.13
FARP1-222ENST00000597777 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
FARP1-222ENST00000597777 BIVM-ERCC5R4GMW8 1640 aa15.84■□□□□ 0.13
FARP1-222ENST00000597777 TOP2BQ02880 1626 aa15.82■□□□□ 0.12
FARP1-222ENST00000597777 LOC105371045A0A1W2PR82 267 aa15.81■□□□□ 0.12
FARP1-222ENST00000597777 SYNJ1O43426 1573 aa15.81■□□□□ 0.12
FARP1-222ENST00000597777 NESP48681 1621 aa15.81■□□□□ 0.12
FARP1-222ENST00000597777 FANCD2Q9BXW9 1451 aa15.81■□□□□ 0.12
FARP1-222ENST00000597777 PDS5BQ9NTI5 1447 aa15.79■□□□□ 0.12
FARP1-222ENST00000597777 CUX1P39880 1505 aa15.75■□□□□ 0.11
FARP1-222ENST00000597777 CEP164Q9UPV0 1460 aa15.75■□□□□ 0.11
FARP1-222ENST00000597777 KIF21AQ7Z4S6 1674 aa15.72■□□□□ 0.11
FARP1-222ENST00000597777 DNMBPQ6XZF7 1577 aa15.71■□□□□ 0.11
FARP1-222ENST00000597777 RANGAP1P46060 587 aaPredicted RBP15.71■□□□□ 0.11
FARP1-222ENST00000597777 EEA1Q15075 1411 aa15.66■□□□□ 0.1
FARP1-222ENST00000597777 TOPBP1Q92547 1522 aa15.64■□□□□ 0.09
FARP1-222ENST00000597777 URB2Q14146 1524 aaKnown RBP15.62■□□□□ 0.09
FARP1-222ENST00000597777 MRC2Q9UBG0 1479 aa15.61■□□□□ 0.09
FARP1-222ENST00000597777 FGD5Q6ZNL6 1462 aa15.59■□□□□ 0.09
FARP1-222ENST00000597777 WDR62O43379 1518 aa15.56■□□□□ 0.08
FARP1-222ENST00000597777 SOGA1O94964 1423 aa15.55■□□□□ 0.08
FARP1-222ENST00000597777 POLA1P09884 1462 aaPredicted RBP15.54■□□□□ 0.08
FARP1-222ENST00000597777 THOC2Q8NI27 1593 aaKnown RBP15.54■□□□□ 0.08
FARP1-222ENST00000597777 ERCC6Q03468 1493 aa15.54■□□□□ 0.08
FARP1-222ENST00000597777 WDR97A6NE52 1622 aa15.52■□□□□ 0.07
FARP1-222ENST00000597777 ABCA10Q8WWZ4 1543 aa15.51■□□□□ 0.07
FARP1-222ENST00000597777 KIF27Q86VH2 1401 aa15.49■□□□□ 0.07
FARP1-222ENST00000597777 RUSC2Q8N2Y8 1516 aa15.48■□□□□ 0.07
FARP1-222ENST00000597777 KIF21BO75037 1637 aa15.46■□□□□ 0.07
FARP1-222ENST00000597777 TARBP1Q13395 1621 aaKnown RBP15.45■□□□□ 0.06
FARP1-222ENST00000597777 HRCP23327 699 aa15.44■□□□□ 0.06
FARP1-222ENST00000597777 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
FARP1-222ENST00000597777 CUX2O14529 1486 aa15.44■□□□□ 0.06
FARP1-222ENST00000597777 RAD54L2Q9Y4B4 1467 aa15.42■□□□□ 0.06
FARP1-222ENST00000597777 ABCA5Q8WWZ7 1642 aa15.41■□□□□ 0.06
FARP1-222ENST00000597777 IFT140Q96RY7 1462 aa15.41■□□□□ 0.06
FARP1-222ENST00000597777 ERICH3Q5RHP9 1530 aa15.39■□□□□ 0.05
FARP1-222ENST00000597777 GOLGA3Q08378 1498 aa15.37■□□□□ 0.05
FARP1-222ENST00000597777 PRXQ9BXM0 1461 aa15.37■□□□□ 0.05
FARP1-222ENST00000597777 CUL7Q14999 1698 aa15.35■□□□□ 0.05
FARP1-222ENST00000597777 IGF1RP08069 1367 aa15.33■□□□□ 0.04
FARP1-222ENST00000597777 GAPVD1Q14C86 1478 aa15.31■□□□□ 0.04
FARP1-222ENST00000597777 PBRM1Q86U86 1689 aa15.31■□□□□ 0.04
FARP1-222ENST00000597777 TNIKQ9UKE5 1360 aa15.29■□□□□ 0.04
FARP1-222ENST00000597777 RAPGEF2Q9Y4G8 1499 aa15.27■□□□□ 0.04
FARP1-222ENST00000597777 EIF4G3O43432 1585 aaKnown RBP15.26■□□□□ 0.03
FARP1-222ENST00000597777 TDRD9Q8NDG6 1382 aaKnown RBP15.25■□□□□ 0.03
FARP1-222ENST00000597777 GRIN2BQ13224 1484 aa15.25■□□□□ 0.03
FARP1-222ENST00000597777 CARMIL1Q5VZK9 1371 aa15.24■□□□□ 0.03
FARP1-222ENST00000597777 ZNF608Q9ULD9 1512 aaPredicted RBP15.22■□□□□ 0.03
FARP1-222ENST00000597777 ADAMTS12P58397 1594 aa15.21■□□□□ 0.03
FARP1-222ENST00000597777 AQRO60306 1485 aaKnown RBP eCLIP15.2■□□□□ 0.022e-9■■■■□ 20.3
FARP1-222ENST00000597777 FHAD1B1AJZ9 1412 aa15.17■□□□□ 0.02
FARP1-222ENST00000597777 UBTFP17480 764 aaKnown RBP15.17■□□□□ 0.02
FARP1-222ENST00000597777 MAGI1Q96QZ7 1491 aaPredicted RBP15.16■□□□□ 0.02
FARP1-222ENST00000597777 CCER1Q8TC90 406 aaPredicted RBP15.16■□□□□ 0.02
FARP1-222ENST00000597777 CEP162Q5TB80 1403 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms