RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 KRTAP10-5P60370 271 aa7.82□□□□□ -1.16
SYNM-204ENST00000594047 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
SYNM-204ENST00000594047 AKAP9Q99996 3911 aa7.76□□□□□ -1.17
SYNM-204ENST00000594047 ZNF469Q96JG9 3925 aaPredicted RBP7.67□□□□□ -1.18
SYNM-204ENST00000594047 DNAH9Q9NYC9 4486 aa7.63□□□□□ -1.19
SYNM-204ENST00000594047 INE1O15225 51 aa7.6□□□□□ -1.19
SYNM-204ENST00000594047 KRTAP4-1Q9BYQ7 146 aa7.54□□□□□ -1.2
SYNM-204ENST00000594047 MT1HP80294 61 aa7.51□□□□□ -1.21
SYNM-204ENST00000594047 SPRR2FQ96RM1 72 aa7.51□□□□□ -1.21
SYNM-204ENST00000594047 DNAH1Q9P2D7 4330 aa7.48□□□□□ -1.21
SYNM-204ENST00000594047 DNAH5Q8TE73 4624 aa7.41□□□□□ -1.22
SYNM-204ENST00000594047 DNAH10Q8IVF4 4471 aa7.32□□□□□ -1.24
SYNM-204ENST00000594047 MT2AP02795 61 aa7.27□□□□□ -1.25
SYNM-204ENST00000594047 DNAH2Q9P225 4427 aa7.27□□□□□ -1.25
SYNM-204ENST00000594047 PLECQ15149 4684 aaKnown RBP7.26□□□□□ -1.25
SYNM-204ENST00000594047 KRTAP10-7P60409 375 aaPredicted RBP7.25□□□□□ -1.25
SYNM-204ENST00000594047 MT1FP04733 61 aa7.19□□□□□ -1.26
SYNM-204ENST00000594047 DNAH11Q96DT5 4516 aa7.17□□□□□ -1.26
SYNM-204ENST00000594047 KRTAP19-5Q3LI72 72 aa7.15□□□□□ -1.26
SYNM-204ENST00000594047 ANK2Q01484 3957 aa7.14□□□□□ -1.27
SYNM-204ENST00000594047 SPRR2EP22531 72 aa7.14□□□□□ -1.27
SYNM-204ENST00000594047 SPRR2BP35325 72 aa7.14□□□□□ -1.27
SYNM-204ENST00000594047 SPRR2AP35326 72 aa7.14□□□□□ -1.27
SYNM-204ENST00000594047 FAT2Q9NYQ8 4349 aa7.13□□□□□ -1.27
SYNM-204ENST00000594047 VPS13BQ7Z7G8 4022 aa7.13□□□□□ -1.27
SYNM-204ENST00000594047 KMT2AQ03164 3969 aa7.1□□□□□ -1.27
SYNM-204ENST00000594047 LRP1BQ9NZR2 4599 aa7.06□□□□□ -1.28
SYNM-204ENST00000594047 DNAH3Q8TD57 4116 aa7.06□□□□□ -1.28
SYNM-204ENST00000594047 STARD9Q9P2P6 4700 aa7.04□□□□□ -1.28
SYNM-204ENST00000594047 FRAS1Q86XX4 4008 aa7.02□□□□□ -1.29
SYNM-204ENST00000594047 DNHD1Q96M86 4753 aa7.02□□□□□ -1.29
SYNM-204ENST00000594047 KRTAP23-1A1A580 65 aa7.01□□□□□ -1.29
SYNM-204ENST00000594047 FAT1Q14517 4588 aa6.98□□□□□ -1.29
SYNM-204ENST00000594047 DNAH17Q9UFH2 4485 aa6.95□□□□□ -1.3
SYNM-204ENST00000594047 VPS13DQ5THJ4 4388 aa6.95□□□□□ -1.3
SYNM-204ENST00000594047 LYSTQ99698 3801 aa6.94□□□□□ -1.3
SYNM-204ENST00000594047 DNAH8Q96JB1 4490 aa6.94□□□□□ -1.3
SYNM-204ENST00000594047 SACSQ9NZJ4 4579 aa6.93□□□□□ -1.3
SYNM-204ENST00000594047 DYNC1H1Q14204 4646 aaKnown RBP6.92□□□□□ -1.3
SYNM-204ENST00000594047 PRKDCP78527 4128 aaKnown RBP6.9□□□□□ -1.3
SYNM-204ENST00000594047 SPRR2GQ9BYE4 73 aa6.89□□□□□ -1.31
SYNM-204ENST00000594047 SPRR2DP22532 72 aa6.87□□□□□ -1.31
SYNM-204ENST00000594047 DYNC2H1Q8NCM8 4307 aaKnown RBP6.85□□□□□ -1.31
SYNM-204ENST00000594047 RYR1P21817 5038 aa6.85□□□□□ -1.31
SYNM-204ENST00000594047 LCE3BQ5TA77 95 aa6.84□□□□□ -1.31
SYNM-204ENST00000594047 LCE3CQ5T5A8 94 aa6.8□□□□□ -1.32
SYNM-204ENST00000594047 CMYA5Q8N3K9 4069 aa6.77□□□□□ -1.33
SYNM-204ENST00000594047 DNAH7Q8WXX0 4024 aa6.76□□□□□ -1.33
SYNM-204ENST00000594047 KRTAP17-1Q9BYP8 105 aa6.76□□□□□ -1.33
SYNM-204ENST00000594047 MT1GP13640 62 aa6.71□□□□□ -1.34
SYNM-204ENST00000594047 DNAH6Q9C0G6 4158 aa6.7□□□□□ -1.34
SYNM-204ENST00000594047 LCE2BO14633 110 aa6.68□□□□□ -1.34
SYNM-204ENST00000594047 APOBP04114 4563 aaKnown RBP6.66□□□□□ -1.34
SYNM-204ENST00000594047 KRTAP4-8A0A0G2JLE6 195 aa6.59□□□□□ -1.36
SYNM-204ENST00000594047 KRTAP4-8Q9BYQ9 185 aa6.59□□□□□ -1.36
SYNM-204ENST00000594047 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
SYNM-204ENST00000594047 FAT3Q8TDW7 4589 aa6.5□□□□□ -1.37
SYNM-204ENST00000594047 RYR3Q15413 4870 aa6.49□□□□□ -1.37
SYNM-204ENST00000594047 LPAP08519 4548 aa6.47□□□□□ -1.37
SYNM-204ENST00000594047 KRTAP12-4P60329 112 aa6.43□□□□□ -1.38
SYNM-204ENST00000594047 MYCBP2O75592 4640 aa6.43□□□□□ -1.38
SYNM-204ENST00000594047 MT1XP80297 61 aa6.4□□□□□ -1.38
SYNM-204ENST00000594047 LRP1Q07954 4544 aaKnown RBP6.37□□□□□ -1.39
SYNM-204ENST00000594047 MT4P47944 62 aa6.34□□□□□ -1.39
SYNM-204ENST00000594047 HECTD4Q9Y4D8 3996 aa6.34□□□□□ -1.4
SYNM-204ENST00000594047 HSPG2P98160 4391 aa6.33□□□□□ -1.4
SYNM-204ENST00000594047 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
SYNM-204ENST00000594047 LCE2DQ5TA82 110 aaPredicted RBP6.29□□□□□ -1.4
SYNM-204ENST00000594047 KRTAP9-8Q9BYQ0 159 aa6.29□□□□□ -1.4
SYNM-204ENST00000594047 MT1BP07438 61 aa6.29□□□□□ -1.4
SYNM-204ENST00000594047 KRTAP19-8Q3LI54 63 aa6.26□□□□□ -1.41
SYNM-204ENST00000594047 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.41
SYNM-204ENST00000594047 PKHD1L1Q86WI1 4243 aa6.2□□□□□ -1.42
SYNM-204ENST00000594047 SPRR5A0A1B0GTR4 108 aa6.2□□□□□ -1.42
SYNM-204ENST00000594047 PKHD1P08F94 4074 aa6.2□□□□□ -1.42
SYNM-204ENST00000594047 KRTAP9-3Q9BYQ3 159 aa6.15□□□□□ -1.42
SYNM-204ENST00000594047 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
SYNM-204ENST00000594047 PKD1P98161 4303 aa6.12□□□□□ -1.43
SYNM-204ENST00000594047 LCE3DQ9BYE3 92 aa6.07□□□□□ -1.44
SYNM-204ENST00000594047 HYDINQ4G0P3 5121 aa6.03□□□□□ -1.44
SYNM-204ENST00000594047 KRTAP19-3Q7Z4W3 81 aa5.97□□□□□ -1.45
SYNM-204ENST00000594047 LCE1BQ5T7P3 118 aa5.96□□□□□ -1.46
SYNM-204ENST00000594047 LRP2P98164 4655 aa5.95□□□□□ -1.46
SYNM-204ENST00000594047 LOC100996750A0A140TA64 210 aa5.95□□□□□ -1.46
SYNM-204ENST00000594047 KIAA1109Q2LD37 5005 aa5.94□□□□□ -1.46
SYNM-204ENST00000594047 KRTAP4-3Q9BYR4 195 aa5.89□□□□□ -1.47
SYNM-204ENST00000594047 LCE1DQ5T752 114 aa5.88□□□□□ -1.47
SYNM-204ENST00000594047 TNXBP22105 4242 aa5.87□□□□□ -1.47
SYNM-204ENST00000594047 LCE3EQ5T5B0 92 aa5.86□□□□□ -1.47
SYNM-204ENST00000594047 HERC2O95714 4834 aa5.86□□□□□ -1.47
SYNM-204ENST00000594047 KRTAP19-4Q3LI73 84 aa5.84□□□□□ -1.47
SYNM-204ENST00000594047 RYR2Q92736 4967 aa5.83□□□□□ -1.48
SYNM-204ENST00000594047 KRTAP9-6A0A140TA67 174 aa5.82□□□□□ -1.48
SYNM-204ENST00000594047 MT1LQ93083 61 aa5.81□□□□□ -1.48
SYNM-204ENST00000594047 MT1EP04732 61 aa5.77□□□□□ -1.49
SYNM-204ENST00000594047 PCLOQ9Y6V0 5065 aa5.75□□□□□ -1.49
SYNM-204ENST00000594047 BIRC6Q9NR09 4857 aa5.74□□□□□ -1.49
SYNM-204ENST00000594047 HERC1Q15751 4861 aa5.7□□□□□ -1.5
SYNM-204ENST00000594047 KRTAP19-6Q3LI70 58 aa5.68□□□□□ -1.5
SYNM-204ENST00000594047 FSIP2Q5CZC0 6907 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms