RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 LINC00304Q8N9R0 145 aa3.44□□□□□ -1.86
PRKCA-205ENST00000583775 DYNC1H1Q14204 4646 aaKnown RBP3.44□□□□□ -1.86
PRKCA-205ENST00000583775 NDUFS5O43920 106 aa3.42□□□□□ -1.86
PRKCA-205ENST00000583775 FP248Q71RG6 208 aaPredicted RBP3.42□□□□□ -1.86
PRKCA-205ENST00000583775 SMR3BP02814 79 aaPredicted RBP3.41□□□□□ -1.86
PRKCA-205ENST00000583775 Q5W150 140 aa3.41□□□□□ -1.86
PRKCA-205ENST00000583775 APOBP04114 4563 aaKnown RBP3.4□□□□□ -1.87
PRKCA-205ENST00000583775 PKHD1L1Q86WI1 4243 aa3.39□□□□□ -1.87
PRKCA-205ENST00000583775 Q1T7F1 81 aa3.39□□□□□ -1.87
PRKCA-205ENST00000583775 KMT2CQ8NEZ4 4911 aaKnown RBP3.37□□□□□ -1.87
PRKCA-205ENST00000583775 KRTAP10-8P60410 259 aa3.37□□□□□ -1.87
PRKCA-205ENST00000583775 V9GYY9 64 aa3.37□□□□□ -1.87
PRKCA-205ENST00000583775 C4orf26Q17RF5 130 aa3.36□□□□□ -1.87
PRKCA-205ENST00000583775 PCOTHQ58A44 107 aa3.36□□□□□ -1.87
PRKCA-205ENST00000583775 C20orf166-AS1Q96NR2 134 aa3.36□□□□□ -1.87
PRKCA-205ENST00000583775 FLG2Q5D862 2391 aaPredicted RBP3.36□□□□□ -1.87
PRKCA-205ENST00000583775 A8MUU9 505 aa3.35□□□□□ -1.87
PRKCA-205ENST00000583775 PRR4Q16378 134 aa3.35□□□□□ -1.87
PRKCA-205ENST00000583775 COA5Q86WW8 74 aa3.35□□□□□ -1.87
PRKCA-205ENST00000583775 DMAC1Q96GE9 116 aa3.34□□□□□ -1.87
PRKCA-205ENST00000583775 HRES1P13985 223 aa3.33□□□□□ -1.88
PRKCA-205ENST00000583775 ACYP2P14621 99 aa3.33□□□□□ -1.88
PRKCA-205ENST00000583775 Q5VSD8 79 aa3.33□□□□□ -1.88
PRKCA-205ENST00000583775 FAT1Q14517 4588 aa3.32□□□□□ -1.88
PRKCA-205ENST00000583775 C7orf65Q6ZTY9 151 aa3.31□□□□□ -1.88
PRKCA-205ENST00000583775 RYR1P21817 5038 aa3.29□□□□□ -1.88
PRKCA-205ENST00000583775 A8MUN3 132 aa3.29□□□□□ -1.88
PRKCA-205ENST00000583775 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
PRKCA-205ENST00000583775 LINC01558Q9Y6Z2 57 aa3.29□□□□□ -1.88
PRKCA-205ENST00000583775 HSPG2P98160 4391 aa3.28□□□□□ -1.88
PRKCA-205ENST00000583775 MT1HL1P0DM35 61 aa3.27□□□□□ -1.89
PRKCA-205ENST00000583775 RYR3Q15413 4870 aa3.27□□□□□ -1.89
PRKCA-205ENST00000583775 RETNLBQ9BQ08 111 aa3.26□□□□□ -1.89
PRKCA-205ENST00000583775 PRO0628Q9UI54 55 aa3.26□□□□□ -1.89
PRKCA-205ENST00000583775 C9orf92A6NGG3 77 aa3.25□□□□□ -1.89
PRKCA-205ENST00000583775 Q5VV11 94 aa3.25□□□□□ -1.89
PRKCA-205ENST00000583775 TNXBP22105 4242 aa3.24□□□□□ -1.89
PRKCA-205ENST00000583775 FAT3Q8TDW7 4589 aa3.24□□□□□ -1.89
PRKCA-205ENST00000583775 PSPHP1O15172 72 aa3.23□□□□□ -1.89
PRKCA-205ENST00000583775 DMBT1Q9UGM3 2413 aaPredicted RBP3.23□□□□□ -1.89
PRKCA-205ENST00000583775 CHKB-CPT1BH3BT56 60 aa3.22□□□□□ -1.89
PRKCA-205ENST00000583775 SPINK7P58062 85 aa3.22□□□□□ -1.89
PRKCA-205ENST00000583775 RPL37P61927 97 aaKnown RBP3.22□□□□□ -1.89
PRKCA-205ENST00000583775 PRR15LQ9BU68 103 aa3.22□□□□□ -1.89
PRKCA-205ENST00000583775 KIAA1109Q2LD37 5005 aa3.22□□□□□ -1.89
PRKCA-205ENST00000583775 LRP1Q07954 4544 aaKnown RBP3.21□□□□□ -1.9
PRKCA-205ENST00000583775 ATP11AUNQ6ZP68 121 aa3.2□□□□□ -1.9
PRKCA-205ENST00000583775 SPTSSBQ8NFR3 76 aa3.2□□□□□ -1.9
PRKCA-205ENST00000583775 BRK1Q8WUW1 75 aa3.2□□□□□ -1.9
PRKCA-205ENST00000583775 TPRXLQ17RH7 258 aa3.19□□□□□ -1.9
PRKCA-205ENST00000583775 COX6B2Q6YFQ2 88 aa3.19□□□□□ -1.9
PRKCA-205ENST00000583775 CDC42SE1Q9NRR8 79 aa3.16□□□□□ -1.9
PRKCA-205ENST00000583775 A0A1B0GU69 56 aa3.15□□□□□ -1.91
PRKCA-205ENST00000583775 A6NED7 52 aa3.15□□□□□ -1.91
PRKCA-205ENST00000583775 EPPK1P58107 5090 aaKnown RBP3.14□□□□□ -1.91
PRKCA-205ENST00000583775 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
PRKCA-205ENST00000583775 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
PRKCA-205ENST00000583775 LCA10Q71F78 164 aa3.14□□□□□ -1.91
PRKCA-205ENST00000583775 MYCBP2O75592 4640 aa3.13□□□□□ -1.91
PRKCA-205ENST00000583775 SPATA8Q6RVD6 105 aa3.12□□□□□ -1.91
PRKCA-205ENST00000583775 UQCR11O14957 56 aa3.11□□□□□ -1.91
PRKCA-205ENST00000583775 SEC61GP60059 68 aa3.11□□□□□ -1.91
PRKCA-205ENST00000583775 A8MU10 97 aa3.08□□□□□ -1.92
PRKCA-205ENST00000583775 H1FX-AS1Q4G0G2 97 aa3.07□□□□□ -1.92
PRKCA-205ENST00000583775 MIR22HGQ0VDD5 57 aa3.06□□□□□ -1.92
PRKCA-205ENST00000583775 A6NN06 94 aa3.05□□□□□ -1.92
PRKCA-205ENST00000583775 PMAIP1Q13794 54 aa3.05□□□□□ -1.92
PRKCA-205ENST00000583775 RBM12B-AS1Q9P1G2 102 aa3.05□□□□□ -1.92
PRKCA-205ENST00000583775 S4R3F8 94 aa3.05□□□□□ -1.92
PRKCA-205ENST00000583775 HERC2O95714 4834 aa3.04□□□□□ -1.92
PRKCA-205ENST00000583775 A0A1B0GU33 70 aa3.03□□□□□ -1.92
PRKCA-205ENST00000583775 BIRC6Q9NR09 4857 aa3.03□□□□□ -1.92
PRKCA-205ENST00000583775 LRP2P98164 4655 aa3.02□□□□□ -1.93
PRKCA-205ENST00000583775 ABCA13Q86UQ4 5058 aa3.01□□□□□ -1.93
PRKCA-205ENST00000583775 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
PRKCA-205ENST00000583775 H0YAA0 97 aa3□□□□□ -1.93
PRKCA-205ENST00000583775 KTN1-AS1Q86SY8 53 aa2.99□□□□□ -1.93
PRKCA-205ENST00000583775 CSAG1Q6PB30 78 aa2.98□□□□□ -1.93
PRKCA-205ENST00000583775 KRTAP19-2Q3LHN2 52 aa2.96□□□□□ -1.94
PRKCA-205ENST00000583775 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
PRKCA-205ENST00000583775 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
PRKCA-205ENST00000583775 KRTAP4-1Q9BYQ7 146 aa2.95□□□□□ -1.94
PRKCA-205ENST00000583775 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
PRKCA-205ENST00000583775 LPAP08519 4548 aa2.94□□□□□ -1.94
PRKCA-205ENST00000583775 MUC17Q685J3 4493 aa2.93□□□□□ -1.94
PRKCA-205ENST00000583775 M0QZ58 72 aa2.92□□□□□ -1.94
PRKCA-205ENST00000583775 P0C880 135 aa2.92□□□□□ -1.94
PRKCA-205ENST00000583775 K7ERS5 55 aa2.91□□□□□ -1.94
PRKCA-205ENST00000583775 KRTAP13-4Q3LI77 160 aa2.91□□□□□ -1.94
PRKCA-205ENST00000583775 ADM2Q7Z4H4 148 aa2.91□□□□□ -1.94
PRKCA-205ENST00000583775 PCLOQ9Y6V0 5065 aa2.89□□□□□ -1.95
PRKCA-205ENST00000583775 HMCN2Q8NDA2 5059 aa2.85□□□□□ -1.95
PRKCA-205ENST00000583775 HERC1Q15751 4861 aa2.84□□□□□ -1.96
PRKCA-205ENST00000583775 KRTAP12-1P59990 96 aa2.83□□□□□ -1.96
PRKCA-205ENST00000583775 FLGP20930 4061 aaPredicted RBP2.83□□□□□ -1.96
PRKCA-205ENST00000583775 ROMO1P60602 79 aa2.82□□□□□ -1.96
PRKCA-205ENST00000583775 CRIPTQ9P021 101 aa2.82□□□□□ -1.96
PRKCA-205ENST00000583775 A0A0D9SG42 100 aa2.81□□□□□ -1.96
PRKCA-205ENST00000583775 R4GN34 69 aa2.81□□□□□ -1.96
PRKCA-205ENST00000583775 KRTAP25-1Q3LHN0 102 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms