RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
SKA2-207ENST00000583380 ANK2Q01484 3957 aa4.55□□□□□ -1.68
SKA2-207ENST00000583380 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
SKA2-207ENST00000583380 NOTCH1P46531 2555 aa4.53□□□□□ -1.68
SKA2-207ENST00000583380 DYNC2H1Q8NCM8 4307 aaKnown RBP4.53□□□□□ -1.68
SKA2-207ENST00000583380 NSD1Q96L73 2696 aaPredicted RBP4.53□□□□□ -1.68
SKA2-207ENST00000583380 TENM1Q9UKZ4 2725 aa4.52□□□□□ -1.69
SKA2-207ENST00000583380 USP24Q9UPU5 2620 aa4.51□□□□□ -1.69
SKA2-207ENST00000583380 COL7A1Q02388 2944 aa4.51□□□□□ -1.69
SKA2-207ENST00000583380 DNAH10Q8IVF4 4471 aa4.51□□□□□ -1.69
SKA2-207ENST00000583380 KRTAP19-4Q3LI73 84 aa4.5□□□□□ -1.69
SKA2-207ENST00000583380 LYSTQ99698 3801 aa4.5□□□□□ -1.69
SKA2-207ENST00000583380 CUBNO60494 3623 aa4.49□□□□□ -1.69
SKA2-207ENST00000583380 R4GN34 69 aa4.49□□□□□ -1.69
SKA2-207ENST00000583380 DMBT1Q9UGM3 2413 aaPredicted RBP4.48□□□□□ -1.69
SKA2-207ENST00000583380 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
SKA2-207ENST00000583380 Q5VSD8 79 aa4.47□□□□□ -1.69
SKA2-207ENST00000583380 DNAH17Q9UFH2 4485 aa4.46□□□□□ -1.69
SKA2-207ENST00000583380 ZNF469Q96JG9 3925 aaPredicted RBP4.46□□□□□ -1.69
SKA2-207ENST00000583380 PRKDCP78527 4128 aaKnown RBP4.46□□□□□ -1.7
SKA2-207ENST00000583380 KRTAP10-1P60331 282 aa4.45□□□□□ -1.7
SKA2-207ENST00000583380 KRTAP10-8P60410 259 aa4.45□□□□□ -1.7
SKA2-207ENST00000583380 LCE5AQ5TCM9 118 aa4.44□□□□□ -1.7
SKA2-207ENST00000583380 HUWE1Q7Z6Z7 4374 aaKnown RBP4.44□□□□□ -1.7
SKA2-207ENST00000583380 DNAH7Q8WXX0 4024 aa4.44□□□□□ -1.7
SKA2-207ENST00000583380 DNAH6Q9C0G6 4158 aa4.44□□□□□ -1.7
SKA2-207ENST00000583380 HECTD4Q9Y4D8 3996 aa4.43□□□□□ -1.7
SKA2-207ENST00000583380 KRTAP10-2P60368 255 aa4.42□□□□□ -1.7
SKA2-207ENST00000583380 DNAH9Q9NYC9 4486 aa4.42□□□□□ -1.7
SKA2-207ENST00000583380 MGAM2Q2M2H8 2515 aa4.4□□□□□ -1.7
SKA2-207ENST00000583380 CMYA5Q8N3K9 4069 aa4.4□□□□□ -1.71
SKA2-207ENST00000583380 STAB1Q9NY15 2570 aa4.39□□□□□ -1.71
SKA2-207ENST00000583380 CSMD3Q7Z407 3707 aa4.38□□□□□ -1.71
SKA2-207ENST00000583380 TNP1P09430 55 aa4.38□□□□□ -1.71
SKA2-207ENST00000583380 KRTAP17-1Q9BYP8 105 aa4.36□□□□□ -1.71
SKA2-207ENST00000583380 DNAH2Q9P225 4427 aa4.34□□□□□ -1.71
SKA2-207ENST00000583380 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
SKA2-207ENST00000583380 KRTAP9-3Q9BYQ3 159 aa4.32□□□□□ -1.72
SKA2-207ENST00000583380 DNAH11Q96DT5 4516 aa4.32□□□□□ -1.72
SKA2-207ENST00000583380 FBN3Q75N90 2809 aa4.31□□□□□ -1.72
SKA2-207ENST00000583380 SACSQ9NZJ4 4579 aa4.25□□□□□ -1.73
SKA2-207ENST00000583380 PLECQ15149 4684 aaKnown RBP4.18□□□□□ -1.74
SKA2-207ENST00000583380 KRTAP9-8Q9BYQ0 159 aa4.18□□□□□ -1.74
SKA2-207ENST00000583380 PKHD1L1Q86WI1 4243 aa4.15□□□□□ -1.75
SKA2-207ENST00000583380 KMT2AQ03164 3969 aa4.13□□□□□ -1.75
SKA2-207ENST00000583380 KRTAP10-4P60372 401 aaPredicted RBP4.13□□□□□ -1.75
SKA2-207ENST00000583380 VPS13BQ7Z7G8 4022 aa4.11□□□□□ -1.75
SKA2-207ENST00000583380 LRP1BQ9NZR2 4599 aa4.08□□□□□ -1.76
SKA2-207ENST00000583380 DNAH5Q8TE73 4624 aa4.06□□□□□ -1.76
SKA2-207ENST00000583380 PKHD1P08F94 4074 aa4.05□□□□□ -1.76
SKA2-207ENST00000583380 SMR3BP02814 79 aaPredicted RBP4.01□□□□□ -1.77
SKA2-207ENST00000583380 LRP1Q07954 4544 aaKnown RBP4.01□□□□□ -1.77
SKA2-207ENST00000583380 A0A1B0GVY2 172 aa3.99□□□□□ -1.77
SKA2-207ENST00000583380 MYCBP2O75592 4640 aa3.98□□□□□ -1.77
SKA2-207ENST00000583380 STARD9Q9P2P6 4700 aa3.96□□□□□ -1.78
SKA2-207ENST00000583380 PKD1P98161 4303 aa3.95□□□□□ -1.78
SKA2-207ENST00000583380 TNXBP22105 4242 aa3.95□□□□□ -1.78
SKA2-207ENST00000583380 APOBP04114 4563 aaKnown RBP3.94□□□□□ -1.78
SKA2-207ENST00000583380 DYNC1H1Q14204 4646 aaKnown RBP3.93□□□□□ -1.78
SKA2-207ENST00000583380 FAT2Q9NYQ8 4349 aa3.92□□□□□ -1.78
SKA2-207ENST00000583380 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.79
SKA2-207ENST00000583380 HSPG2P98160 4391 aa3.86□□□□□ -1.79
SKA2-207ENST00000583380 FAT3Q8TDW7 4589 aa3.85□□□□□ -1.79
SKA2-207ENST00000583380 KRTAP10-10P60014 251 aa3.81□□□□□ -1.8
SKA2-207ENST00000583380 FAT1Q14517 4588 aa3.8□□□□□ -1.8
SKA2-207ENST00000583380 FLGP20930 4061 aaPredicted RBP3.79□□□□□ -1.8
SKA2-207ENST00000583380 LCE3AQ5TA76 89 aa3.74□□□□□ -1.81
SKA2-207ENST00000583380 MT1HL1P0DM35 61 aa3.72□□□□□ -1.81
SKA2-207ENST00000583380 SPRR2GQ9BYE4 73 aa3.72□□□□□ -1.81
SKA2-207ENST00000583380 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
SKA2-207ENST00000583380 KRTAP10-12P60413 245 aa3.67□□□□□ -1.82
SKA2-207ENST00000583380 DNHD1Q96M86 4753 aa3.58□□□□□ -1.84
SKA2-207ENST00000583380 KRTAP19-2Q3LHN2 52 aa3.58□□□□□ -1.84
SKA2-207ENST00000583380 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
SKA2-207ENST00000583380 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
SKA2-207ENST00000583380 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
SKA2-207ENST00000583380 KRTAP2-1Q9BYU5 128 aa3.55□□□□□ -1.84
SKA2-207ENST00000583380 M0R2T5 61 aa3.54□□□□□ -1.84
SKA2-207ENST00000583380 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
SKA2-207ENST00000583380 HERC1Q15751 4861 aa3.49□□□□□ -1.85
SKA2-207ENST00000583380 KRTAP19-8Q3LI54 63 aa3.46□□□□□ -1.86
SKA2-207ENST00000583380 KRTAP21-3Q3LHN1 58 aa3.42□□□□□ -1.86
SKA2-207ENST00000583380 KRTAP4-1Q9BYQ7 146 aa3.41□□□□□ -1.86
SKA2-207ENST00000583380 HYDINQ4G0P3 5121 aa3.4□□□□□ -1.86
SKA2-207ENST00000583380 LRP2P98164 4655 aa3.38□□□□□ -1.87
SKA2-207ENST00000583380 MUC17Q685J3 4493 aa3.38□□□□□ -1.87
SKA2-207ENST00000583380 KRTAP10-7P60409 375 aaPredicted RBP3.33□□□□□ -1.88
SKA2-207ENST00000583380 LPAP08519 4548 aa3.33□□□□□ -1.88
SKA2-207ENST00000583380 MT1XP80297 61 aa3.31□□□□□ -1.88
SKA2-207ENST00000583380 RYR2Q92736 4967 aa3.29□□□□□ -1.88
SKA2-207ENST00000583380 KMT2CQ8NEZ4 4911 aaKnown RBP3.26□□□□□ -1.89
SKA2-207ENST00000583380 KRTAP19-5Q3LI72 72 aa3.24□□□□□ -1.89
SKA2-207ENST00000583380 RYR1P21817 5038 aa3.19□□□□□ -1.9
SKA2-207ENST00000583380 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
SKA2-207ENST00000583380 MT1BP07438 61 aa3.18□□□□□ -1.9
SKA2-207ENST00000583380 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
SKA2-207ENST00000583380 MT2AP02795 61 aa3.15□□□□□ -1.91
SKA2-207ENST00000583380 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
SKA2-207ENST00000583380 MT1FP04733 61 aa3.11□□□□□ -1.91
SKA2-207ENST00000583380 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms