RNA–Protein interactions for RNA: ENST00000581448.5

PLEKHM1-207, Transcript of pleckstrin homology and RUN domain containing M1, humanhuman

TSL 1 (best)

Gene PLEKHM1, Length 3,292 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHM1-207ENST00000581448 C20orf166-AS1Q96NR2 134 aa6.87□□□□□ -1.31
PLEKHM1-207ENST00000581448 KRTAP13-4Q3LI77 160 aa6.86□□□□□ -1.31
PLEKHM1-207ENST00000581448 APOBP04114 4563 aaKnown RBP6.86□□□□□ -1.31
PLEKHM1-207ENST00000581448 A0A1B0GVY2 172 aa6.86□□□□□ -1.31
PLEKHM1-207ENST00000581448 RPL37P61927 97 aaKnown RBP6.84□□□□□ -1.31
PLEKHM1-207ENST00000581448 RYR3Q15413 4870 aa6.83□□□□□ -1.32
PLEKHM1-207ENST00000581448 LRP1Q07954 4544 aaKnown RBP6.82□□□□□ -1.32
PLEKHM1-207ENST00000581448 TPRXLQ17RH7 258 aa6.82□□□□□ -1.32
PLEKHM1-207ENST00000581448 J3QL48 77 aa6.81□□□□□ -1.32
PLEKHM1-207ENST00000581448 NDUFAF8A1L188 74 aa6.77□□□□□ -1.33
PLEKHM1-207ENST00000581448 KIAA1109Q2LD37 5005 aa6.76□□□□□ -1.33
PLEKHM1-207ENST00000581448 KRTAP10-6P60371 365 aaPredicted RBP6.75□□□□□ -1.33
PLEKHM1-207ENST00000581448 KRTAP10-8P60410 259 aa6.74□□□□□ -1.33
PLEKHM1-207ENST00000581448 KRTAP10-4P60372 401 aaPredicted RBP6.72□□□□□ -1.33
PLEKHM1-207ENST00000581448 HSPG2P98160 4391 aa6.72□□□□□ -1.33
PLEKHM1-207ENST00000581448 Q5VSD8 79 aa6.71□□□□□ -1.33
PLEKHM1-207ENST00000581448 S4R3F8 94 aa6.7□□□□□ -1.34
PLEKHM1-207ENST00000581448 RPS29P62273 56 aaKnown RBP6.7□□□□□ -1.34
PLEKHM1-207ENST00000581448 KRTAP3-3Q9BYR6 98 aa6.7□□□□□ -1.34
PLEKHM1-207ENST00000581448 KRTAP12-2P59991 146 aa6.68□□□□□ -1.34
PLEKHM1-207ENST00000581448 A0A0A0MQY5 61 aa6.65□□□□□ -1.34
PLEKHM1-207ENST00000581448 KRTAP3-2Q9BYR7 98 aa6.65□□□□□ -1.34
PLEKHM1-207ENST00000581448 PKHD1L1Q86WI1 4243 aa6.65□□□□□ -1.35
PLEKHM1-207ENST00000581448 KRTAP17-1Q9BYP8 105 aa6.65□□□□□ -1.35
PLEKHM1-207ENST00000581448 FAT3Q8TDW7 4589 aa6.62□□□□□ -1.35
PLEKHM1-207ENST00000581448 EPPK1P58107 5090 aaKnown RBP6.62□□□□□ -1.35
PLEKHM1-207ENST00000581448 LPAP08519 4548 aa6.58□□□□□ -1.36
PLEKHM1-207ENST00000581448 RYR1P21817 5038 aa6.57□□□□□ -1.36
PLEKHM1-207ENST00000581448 XP32Q5T750 250 aa6.54□□□□□ -1.36
PLEKHM1-207ENST00000581448 KRTAP12-1P59990 96 aa6.51□□□□□ -1.37
PLEKHM1-207ENST00000581448 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
PLEKHM1-207ENST00000581448 TNXBP22105 4242 aa6.48□□□□□ -1.37
PLEKHM1-207ENST00000581448 LRP2P98164 4655 aa6.46□□□□□ -1.38
PLEKHM1-207ENST00000581448 KRTAP4-5Q9BYR2 181 aa6.45□□□□□ -1.38
PLEKHM1-207ENST00000581448 M0QZ58 72 aa6.42□□□□□ -1.38
PLEKHM1-207ENST00000581448 MT1HL1P0DM35 61 aa6.38□□□□□ -1.39
PLEKHM1-207ENST00000581448 ABCA13Q86UQ4 5058 aa6.38□□□□□ -1.39
PLEKHM1-207ENST00000581448 R4GN34 69 aa6.36□□□□□ -1.39
PLEKHM1-207ENST00000581448 HERC2O95714 4834 aa6.25□□□□□ -1.41
PLEKHM1-207ENST00000581448 LORP23490 312 aaPredicted RBP6.24□□□□□ -1.41
PLEKHM1-207ENST00000581448 PLAC4Q8WY50 150 aa6.23□□□□□ -1.41
PLEKHM1-207ENST00000581448 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
PLEKHM1-207ENST00000581448 MUC2Q02817 5179 aa6.11□□□□□ -1.43
PLEKHM1-207ENST00000581448 LUZP6Q538Z0 58 aa6.1□□□□□ -1.43
PLEKHM1-207ENST00000581448 HERC1Q15751 4861 aa6.08□□□□□ -1.44
PLEKHM1-207ENST00000581448 PCLOQ9Y6V0 5065 aa6.03□□□□□ -1.44
PLEKHM1-207ENST00000581448 BIRC6Q9NR09 4857 aa6.02□□□□□ -1.45
PLEKHM1-207ENST00000581448 KRTAP4-1Q9BYQ7 146 aa5.96□□□□□ -1.46
PLEKHM1-207ENST00000581448 SEC61BP60468 96 aaKnown RBP5.95□□□□□ -1.46
PLEKHM1-207ENST00000581448 FAT4Q6V0I7 4981 aa5.84□□□□□ -1.48
PLEKHM1-207ENST00000581448 MUC17Q685J3 4493 aa5.84□□□□□ -1.48
PLEKHM1-207ENST00000581448 RNF213Q63HN8 5207 aa5.83□□□□□ -1.48
PLEKHM1-207ENST00000581448 PP632Q6XCG6 107 aa5.78□□□□□ -1.48
PLEKHM1-207ENST00000581448 TNP1P09430 55 aa5.77□□□□□ -1.49
PLEKHM1-207ENST00000581448 HMCN2Q8NDA2 5059 aa5.75□□□□□ -1.49
PLEKHM1-207ENST00000581448 UBR4Q5T4S7 5183 aa5.74□□□□□ -1.49
PLEKHM1-207ENST00000581448 KRTAP19-2Q3LHN2 52 aa5.63□□□□□ -1.51
PLEKHM1-207ENST00000581448 M0R2T5 61 aa5.61□□□□□ -1.51
PLEKHM1-207ENST00000581448 FLGP20930 4061 aaPredicted RBP5.56□□□□□ -1.52
PLEKHM1-207ENST00000581448 LCE3AQ5TA76 89 aa5.49□□□□□ -1.53
PLEKHM1-207ENST00000581448 LCE2CQ5TA81 110 aa5.45□□□□□ -1.54
PLEKHM1-207ENST00000581448 SPRR5A0A1B0GTR4 108 aa5.4□□□□□ -1.55
PLEKHM1-207ENST00000581448 LCE2DQ5TA82 110 aaPredicted RBP5.4□□□□□ -1.55
PLEKHM1-207ENST00000581448 KRTAP10-10P60014 251 aa5.37□□□□□ -1.55
PLEKHM1-207ENST00000581448 MT1HP80294 61 aa5.37□□□□□ -1.55
PLEKHM1-207ENST00000581448 KRTAP19-1Q8IUB9 90 aa5.33□□□□□ -1.56
PLEKHM1-207ENST00000581448 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
PLEKHM1-207ENST00000581448 MT1FP04733 61 aa5.26□□□□□ -1.57
PLEKHM1-207ENST00000581448 SPRR2GQ9BYE4 73 aa5.24□□□□□ -1.57
PLEKHM1-207ENST00000581448 MT2AP02795 61 aa5.24□□□□□ -1.57
PLEKHM1-207ENST00000581448 PRO2289Q9P1D8 64 aa5.19□□□□□ -1.58
PLEKHM1-207ENST00000581448 KRTAP9-8Q9BYQ0 159 aa5.18□□□□□ -1.58
PLEKHM1-207ENST00000581448 KMT2DO14686 5537 aa5.17□□□□□ -1.58
PLEKHM1-207ENST00000581448 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
PLEKHM1-207ENST00000581448 USH2AO75445 5202 aa5.14□□□□□ -1.59
PLEKHM1-207ENST00000581448 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
PLEKHM1-207ENST00000581448 LCE2AQ5TA79 106 aaPredicted RBP5.09□□□□□ -1.59
PLEKHM1-207ENST00000581448 KRTAP8-1Q8IUC2 63 aa5.09□□□□□ -1.59
PLEKHM1-207ENST00000581448 KRTAP10-7P60409 375 aaPredicted RBP5.08□□□□□ -1.6
PLEKHM1-207ENST00000581448 KRTAP10-5P60370 271 aa5.06□□□□□ -1.6
PLEKHM1-207ENST00000581448 FSIP2Q5CZC0 6907 aa5.05□□□□□ -1.6
PLEKHM1-207ENST00000581448 MT1XP80297 61 aa5.05□□□□□ -1.6
PLEKHM1-207ENST00000581448 LCE2BO14633 110 aa5.03□□□□□ -1.6
PLEKHM1-207ENST00000581448 INE1O15225 51 aa5.03□□□□□ -1.6
PLEKHM1-207ENST00000581448 MT1BP07438 61 aa5□□□□□ -1.61
PLEKHM1-207ENST00000581448 KRTAP9-3Q9BYQ3 159 aa4.95□□□□□ -1.62
PLEKHM1-207ENST00000581448 KRTAP19-8Q3LI54 63 aa4.91□□□□□ -1.62
PLEKHM1-207ENST00000581448 KRTAP19-5Q3LI72 72 aa4.9□□□□□ -1.62
PLEKHM1-207ENST00000581448 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
PLEKHM1-207ENST00000581448 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.63
PLEKHM1-207ENST00000581448 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
PLEKHM1-207ENST00000581448 LCE3CQ5T5A8 94 aa4.8□□□□□ -1.64
PLEKHM1-207ENST00000581448 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
PLEKHM1-207ENST00000581448 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
PLEKHM1-207ENST00000581448 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
PLEKHM1-207ENST00000581448 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
PLEKHM1-207ENST00000581448 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
PLEKHM1-207ENST00000581448 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
PLEKHM1-207ENST00000581448 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
PLEKHM1-207ENST00000581448 SYNE1Q8NF91 8797 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms