RNA–Protein interactions for RNA: ENST00000581448.5

PLEKHM1-207, Transcript of pleckstrin homology and RUN domain containing M1, humanhuman

TSL 1 (best)

Gene PLEKHM1, Length 3,292 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHM1-207ENST00000581448 NISCHQ9Y2I1 1504 aa25.5■■□□□ 1.67
PLEKHM1-207ENST00000581448 SHROOM4Q9ULL8 1493 aa22.59■■□□□ 1.21
PLEKHM1-207ENST00000581448 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
PLEKHM1-207ENST00000581448 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
PLEKHM1-207ENST00000581448 PCGF6Q9BYE7 350 aa21.99■■□□□ 1.11
PLEKHM1-207ENST00000581448 PPARGC1BQ86YN6 1023 aaKnown RBP21.95■■□□□ 1.1
PLEKHM1-207ENST00000581448 HRCP23327 699 aa21.91■■□□□ 1.1
PLEKHM1-207ENST00000581448 CCDC180Q9P1Z9 1646 aa21.63■■□□□ 1.05
PLEKHM1-207ENST00000581448 MYO15BQ96JP2 1530 aa21.57■■□□□ 1.04
PLEKHM1-207ENST00000581448 CHIC1Q5VXU3 224 aa21.57■■□□□ 1.04
PLEKHM1-207ENST00000581448 ZCCHC6Q5VYS8 1495 aaKnown RBP21.43■■□□□ 1.02
PLEKHM1-207ENST00000581448 LOC105371045A0A1W2PR82 267 aa21.43■■□□□ 1.02
PLEKHM1-207ENST00000581448 EHMT2Q96KQ7 1210 aa21.21■□□□□ 0.99
PLEKHM1-207ENST00000581448 FAM9AQ8IZU1 332 aaPredicted RBP20.95■□□□□ 0.94
PLEKHM1-207ENST00000581448 ABCC9O60706 1549 aa20.94■□□□□ 0.94
PLEKHM1-207ENST00000581448 TRIM26Q12899 539 aaPredicted RBP20.93■□□□□ 0.94
PLEKHM1-207ENST00000581448 SCAF1Q9H7N4 1312 aaKnown RBP20.79■□□□□ 0.92
PLEKHM1-207ENST00000581448 DCAF1Q9Y4B6 1507 aa20.69■□□□□ 0.9
PLEKHM1-207ENST00000581448 SCRIBQ14160 1630 aa20.64■□□□□ 0.9
PLEKHM1-207ENST00000581448 PELP1Q8IZL8 1130 aaKnown RBP20.6■□□□□ 0.89
PLEKHM1-207ENST00000581448 TTBK1Q5TCY1 1321 aaPredicted RBP20.58■□□□□ 0.88
PLEKHM1-207ENST00000581448 TRIM41Q8WV44 630 aa20.54■□□□□ 0.88
PLEKHM1-207ENST00000581448 ZEB1P37275 1124 aaPredicted RBP20.53■□□□□ 0.88
PLEKHM1-207ENST00000581448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.46■□□□□ 0.87
PLEKHM1-207ENST00000581448 NEUROD1Q13562 356 aa20.36■□□□□ 0.85
PLEKHM1-207ENST00000581448 CCER1Q8TC90 406 aaPredicted RBP20.36■□□□□ 0.85
PLEKHM1-207ENST00000581448 GTF3C3Q9Y5Q9 886 aa20.29■□□□□ 0.84
PLEKHM1-207ENST00000581448 ACIN1Q9UKV3 1341 aaKnown RBP20.24■□□□□ 0.83
PLEKHM1-207ENST00000581448 YTHDC1Q96MU7 727 aaKnown RBP20.24■□□□□ 0.83
PLEKHM1-207ENST00000581448 NACADO15069 1562 aa20.2■□□□□ 0.82
PLEKHM1-207ENST00000581448 DIEXFQ68CQ4 756 aaKnown RBP20.14■□□□□ 0.82
PLEKHM1-207ENST00000581448 RSF1Q96T23 1441 aaPredicted RBP20.13■□□□□ 0.81
PLEKHM1-207ENST00000581448 CECR2Q9BXF3 1484 aa20.12■□□□□ 0.81
PLEKHM1-207ENST00000581448 PABPN1Q86U42 306 aaKnown RBP eCLIP20.11■□□□□ 0.81
PLEKHM1-207ENST00000581448 CENPBP07199 599 aaPredicted RBP20.07■□□□□ 0.8
PLEKHM1-207ENST00000581448 RB1CC1Q8TDY2 1594 aa20.04■□□□□ 0.8
PLEKHM1-207ENST00000581448 MROH2BQ7Z745 1585 aa19.93■□□□□ 0.78
PLEKHM1-207ENST00000581448 WIZO95785 1651 aa19.82■□□□□ 0.76
PLEKHM1-207ENST00000581448 HNRNPUL2Q1KMD3 747 aaKnown RBP19.73■□□□□ 0.75
PLEKHM1-207ENST00000581448 RANGAP1P46060 587 aaPredicted RBP19.71■□□□□ 0.75
PLEKHM1-207ENST00000581448 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
PLEKHM1-207ENST00000581448 MIER1Q8N108 512 aa19.69■□□□□ 0.74
PLEKHM1-207ENST00000581448 UBTFP17480 764 aaKnown RBP19.67■□□□□ 0.74
PLEKHM1-207ENST00000581448 ZNF316A6NFI3 1004 aaPredicted RBP19.67■□□□□ 0.74
PLEKHM1-207ENST00000581448 BAZ1AQ9NRL2 1556 aaPredicted RBP19.6■□□□□ 0.73
PLEKHM1-207ENST00000581448 MYT1Q01538 1121 aa19.6■□□□□ 0.73
PLEKHM1-207ENST00000581448 SMARCA4P51532 1647 aa19.5■□□□□ 0.71
PLEKHM1-207ENST00000581448 BICRAQ9NZM4 1560 aa19.49■□□□□ 0.71
PLEKHM1-207ENST00000581448 CCDC88BA6NC98 1476 aa19.39■□□□□ 0.69
PLEKHM1-207ENST00000581448 CEP162Q5TB80 1403 aa19.36■□□□□ 0.69
PLEKHM1-207ENST00000581448 ABCC8Q09428 1581 aa19.35■□□□□ 0.69
PLEKHM1-207ENST00000581448 TOP2AP11388 1531 aaKnown RBP19.34■□□□□ 0.69
PLEKHM1-207ENST00000581448 BCANQ96GW7 911 aa19.3■□□□□ 0.68
PLEKHM1-207ENST00000581448 SOGA1O94964 1423 aa19.3■□□□□ 0.68
PLEKHM1-207ENST00000581448 APLP2Q06481 763 aa19.27■□□□□ 0.68
PLEKHM1-207ENST00000581448 SMARCA2P51531 1590 aa19.27■□□□□ 0.68
PLEKHM1-207ENST00000581448 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
PLEKHM1-207ENST00000581448 RUSC2Q8N2Y8 1516 aa19.2■□□□□ 0.66
PLEKHM1-207ENST00000581448 SUPT16HQ9Y5B9 1047 aaKnown RBP19.19■□□□□ 0.66
PLEKHM1-207ENST00000581448 ITGAEP38570 1179 aa19.18■□□□□ 0.66
PLEKHM1-207ENST00000581448 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
PLEKHM1-207ENST00000581448 ATAD2BQ9ULI0 1458 aa19.15■□□□□ 0.66
PLEKHM1-207ENST00000581448 KCNH8Q96L42 1107 aa19.09■□□□□ 0.65
PLEKHM1-207ENST00000581448 EIF4G1Q04637 1599 aaKnown RBP19.09■□□□□ 0.65
PLEKHM1-207ENST00000581448 TNIKQ9UKE5 1360 aa19.08■□□□□ 0.64
PLEKHM1-207ENST00000581448 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
PLEKHM1-207ENST00000581448 TSHZ2Q9NRE2 1034 aa19.04■□□□□ 0.64
PLEKHM1-207ENST00000581448 FKBP8Q14318 412 aa18.94■□□□□ 0.62
PLEKHM1-207ENST00000581448 ANP32EQ9BTT0 268 aa18.94■□□□□ 0.62
PLEKHM1-207ENST00000581448 HIRIP3Q9BW71 556 aaPredicted RBP18.93■□□□□ 0.62
PLEKHM1-207ENST00000581448 PEG3Q9GZU2 1588 aa18.93■□□□□ 0.62
PLEKHM1-207ENST00000581448 CLIP1P30622 1438 aa18.91■□□□□ 0.62
PLEKHM1-207ENST00000581448 GOLGA3Q08378 1498 aa18.88■□□□□ 0.61
PLEKHM1-207ENST00000581448 BCL11AQ9H165 835 aa18.87■□□□□ 0.61
PLEKHM1-207ENST00000581448 DDX10Q13206 875 aaKnown RBP18.85■□□□□ 0.61
PLEKHM1-207ENST00000581448 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
PLEKHM1-207ENST00000581448 TRIM52Q96A61 297 aa18.84■□□□□ 0.61
PLEKHM1-207ENST00000581448 KANK4Q5T7N3 995 aaPredicted RBP18.82■□□□□ 0.6
PLEKHM1-207ENST00000581448 DHX57Q6P158 1386 aaKnown RBP18.75■□□□□ 0.59
PLEKHM1-207ENST00000581448 NCAPD3P42695 1498 aa18.74■□□□□ 0.59
PLEKHM1-207ENST00000581448 NEFLP07196 543 aa18.74■□□□□ 0.59
PLEKHM1-207ENST00000581448 ATP1B4Q9UN42 357 aaPredicted RBP18.73■□□□□ 0.59
PLEKHM1-207ENST00000581448 IRX6P78412 446 aaPredicted RBP18.72■□□□□ 0.59
PLEKHM1-207ENST00000581448 VPS8Q8N3P4 1428 aa18.71■□□□□ 0.58
PLEKHM1-207ENST00000581448 EEA1Q15075 1411 aa18.69■□□□□ 0.58
PLEKHM1-207ENST00000581448 RAPGEF2Q9Y4G8 1499 aa18.68■□□□□ 0.58
PLEKHM1-207ENST00000581448 SIN3AQ96ST3 1273 aa18.68■□□□□ 0.58
PLEKHM1-207ENST00000581448 RBM19Q9Y4C8 960 aaKnown RBP18.67■□□□□ 0.58
PLEKHM1-207ENST00000581448 CEP164Q9UPV0 1460 aa18.66■□□□□ 0.58
PLEKHM1-207ENST00000581448 HMGXB3Q12766 1538 aa18.63■□□□□ 0.57
PLEKHM1-207ENST00000581448 CLSPNQ9HAW4 1339 aa18.63■□□□□ 0.57
PLEKHM1-207ENST00000581448 DNAJC5BQ9UF47 199 aa18.63■□□□□ 0.57
PLEKHM1-207ENST00000581448 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
PLEKHM1-207ENST00000581448 FAM50AQ14320 339 aaKnown RBP18.61■□□□□ 0.57
PLEKHM1-207ENST00000581448 ERICH6Q7L0X2 663 aa18.57■□□□□ 0.56
PLEKHM1-207ENST00000581448 CUX1P39880 1505 aa18.54■□□□□ 0.56
PLEKHM1-207ENST00000581448 CFTRP13569 1480 aa18.53■□□□□ 0.56
PLEKHM1-207ENST00000581448 P3H3Q8IVL6 736 aa18.53■□□□□ 0.56
PLEKHM1-207ENST00000581448 TOP2BQ02880 1626 aa18.52■□□□□ 0.56
PLEKHM1-207ENST00000581448 CNGB1Q14028 1251 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 202.9 ms