RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 XP32Q5T750 250 aa10.84□□□□□ -0.67
SMG8-203ENST00000578922 SPATA8Q6RVD6 105 aa10.83□□□□□ -0.68
SMG8-203ENST00000578922 PCLOQ9Y6V0 5065 aa10.81□□□□□ -0.68
SMG8-203ENST00000578922 UQCR11O14957 56 aa10.79□□□□□ -0.68
SMG8-203ENST00000578922 LPAP08519 4548 aa10.77□□□□□ -0.69
SMG8-203ENST00000578922 RPL37P61927 97 aaKnown RBP10.75□□□□□ -0.69
SMG8-203ENST00000578922 MIR22HGQ0VDD5 57 aa10.74□□□□□ -0.69
SMG8-203ENST00000578922 TPRXLQ17RH7 258 aa10.73□□□□□ -0.69
SMG8-203ENST00000578922 RBM12B-AS1Q9P1G2 102 aa10.7□□□□□ -0.7
SMG8-203ENST00000578922 LRP2P98164 4655 aa10.68□□□□□ -0.7
SMG8-203ENST00000578922 HERC1Q15751 4861 aa10.59□□□□□ -0.71
SMG8-203ENST00000578922 KRTAP3-1Q9BYR8 98 aa10.48□□□□□ -0.73
SMG8-203ENST00000578922 PRAC1Q96KF2 57 aa10.41□□□□□ -0.74
SMG8-203ENST00000578922 HMCN2Q8NDA2 5059 aa10.39□□□□□ -0.75
SMG8-203ENST00000578922 COX6B2Q6YFQ2 88 aa10.38□□□□□ -0.75
SMG8-203ENST00000578922 ADM2Q7Z4H4 148 aa10.38□□□□□ -0.75
SMG8-203ENST00000578922 SEC61BP60468 96 aaKnown RBP10.37□□□□□ -0.75
SMG8-203ENST00000578922 A0A1B0GU33 70 aa10.35□□□□□ -0.75
SMG8-203ENST00000578922 H0YAA0 97 aa10.34□□□□□ -0.75
SMG8-203ENST00000578922 H1FX-AS1Q4G0G2 97 aa10.31□□□□□ -0.76
SMG8-203ENST00000578922 KRTAP4-1Q9BYQ7 146 aa10.25□□□□□ -0.77
SMG8-203ENST00000578922 MUC17Q685J3 4493 aa10.21□□□□□ -0.78
SMG8-203ENST00000578922 LINC01554Q52M75 96 aa10.19□□□□□ -0.78
SMG8-203ENST00000578922 MUC2Q02817 5179 aa10.16□□□□□ -0.78
SMG8-203ENST00000578922 CSAG1Q6PB30 78 aa10.16□□□□□ -0.78
SMG8-203ENST00000578922 K7ERS5 55 aa10.09□□□□□ -0.79
SMG8-203ENST00000578922 S4R3F8 94 aa10.06□□□□□ -0.8
SMG8-203ENST00000578922 KRTAP3-3Q9BYR6 98 aa10.05□□□□□ -0.8
SMG8-203ENST00000578922 UBR4Q5T4S7 5183 aa10.02□□□□□ -0.8
SMG8-203ENST00000578922 KRTAP10-6P60371 365 aaPredicted RBP9.99□□□□□ -0.81
SMG8-203ENST00000578922 KRTAP25-1Q3LHN0 102 aa9.95□□□□□ -0.82
SMG8-203ENST00000578922 KRTAP3-2Q9BYR7 98 aa9.92□□□□□ -0.82
SMG8-203ENST00000578922 KRTAP19-2Q3LHN2 52 aa9.91□□□□□ -0.82
SMG8-203ENST00000578922 RNF213Q63HN8 5207 aa9.91□□□□□ -0.82
SMG8-203ENST00000578922 KRTAP13-4Q3LI77 160 aa9.83□□□□□ -0.84
SMG8-203ENST00000578922 ROMO1P60602 79 aa9.82□□□□□ -0.84
SMG8-203ENST00000578922 H3BS24 57 aa9.76□□□□□ -0.85
SMG8-203ENST00000578922 P0C880 135 aa9.74□□□□□ -0.85
SMG8-203ENST00000578922 A0A0D9SG42 100 aa9.74□□□□□ -0.85
SMG8-203ENST00000578922 FAT4Q6V0I7 4981 aa9.72□□□□□ -0.85
SMG8-203ENST00000578922 FLGP20930 4061 aaPredicted RBP9.71□□□□□ -0.85
SMG8-203ENST00000578922 LCE2CQ5TA81 110 aa9.68□□□□□ -0.86
SMG8-203ENST00000578922 CRIPTQ9P021 101 aa9.62□□□□□ -0.87
SMG8-203ENST00000578922 M0QZ58 72 aa9.58□□□□□ -0.88
SMG8-203ENST00000578922 KRTAP12-2P59991 146 aa9.54□□□□□ -0.88
SMG8-203ENST00000578922 KRTAP12-1P59990 96 aa9.51□□□□□ -0.89
SMG8-203ENST00000578922 MT1HP80294 61 aa9.49□□□□□ -0.89
SMG8-203ENST00000578922 M0R2T5 61 aa9.47□□□□□ -0.89
SMG8-203ENST00000578922 SPINT4Q6UDR6 99 aa9.45□□□□□ -0.9
SMG8-203ENST00000578922 LORP23490 312 aaPredicted RBP9.37□□□□□ -0.91
SMG8-203ENST00000578922 C10orf95Q9H7T3 257 aa9.33□□□□□ -0.92
SMG8-203ENST00000578922 R4GN34 69 aa9.3□□□□□ -0.92
SMG8-203ENST00000578922 MT2AP02795 61 aa9.13□□□□□ -0.95
SMG8-203ENST00000578922 KRTAP9-8Q9BYQ0 159 aa9.13□□□□□ -0.95
SMG8-203ENST00000578922 MT1FP04733 61 aa9.1□□□□□ -0.95
SMG8-203ENST00000578922 KRTAP10-10P60014 251 aa9.09□□□□□ -0.95
SMG8-203ENST00000578922 KRTAP15-1Q3LI76 137 aa9.07□□□□□ -0.96
SMG8-203ENST00000578922 LCE2AQ5TA79 106 aaPredicted RBP9.02□□□□□ -0.97
SMG8-203ENST00000578922 KRTAP19-1Q8IUB9 90 aa8.94□□□□□ -0.98
SMG8-203ENST00000578922 SPRR2GQ9BYE4 73 aa8.92□□□□□ -0.98
SMG8-203ENST00000578922 KRTAP9-3Q9BYQ3 159 aa8.79□□□□□ -1
SMG8-203ENST00000578922 CAMK2N1Q7Z7J9 78 aa8.79□□□□□ -1
SMG8-203ENST00000578922 PP632Q6XCG6 107 aa8.78□□□□□ -1
SMG8-203ENST00000578922 NDUFAF8A1L188 74 aa8.78□□□□□ -1
SMG8-203ENST00000578922 PLAC4Q8WY50 150 aa8.69□□□□□ -1.02
SMG8-203ENST00000578922 KRTAP19-8Q3LI54 63 aa8.65□□□□□ -1.02
SMG8-203ENST00000578922 MT1BP07438 61 aa8.6□□□□□ -1.03
SMG8-203ENST00000578922 LCE2BO14633 110 aa8.58□□□□□ -1.04
SMG8-203ENST00000578922 KRTAP23-1A1A580 65 aa8.54□□□□□ -1.04
SMG8-203ENST00000578922 TNP1P09430 55 aa8.52□□□□□ -1.05
SMG8-203ENST00000578922 USH2AO75445 5202 aa8.47□□□□□ -1.05
SMG8-203ENST00000578922 MT1XP80297 61 aa8.35□□□□□ -1.07
SMG8-203ENST00000578922 KRTAP10-5P60370 271 aa8.34□□□□□ -1.08
SMG8-203ENST00000578922 LUZP6Q538Z0 58 aa8.32□□□□□ -1.08
SMG8-203ENST00000578922 FSIP2Q5CZC0 6907 aa8.2□□□□□ -1.1
SMG8-203ENST00000578922 A0A0A0MQY5 61 aa8.19□□□□□ -1.1
SMG8-203ENST00000578922 PRO2289Q9P1D8 64 aa8.18□□□□□ -1.1
SMG8-203ENST00000578922 SPRR5A0A1B0GTR4 108 aa8.15□□□□□ -1.11
SMG8-203ENST00000578922 SSPOA2VEC9 5147 aa8.15□□□□□ -1.11
SMG8-203ENST00000578922 LCE2DQ5TA82 110 aaPredicted RBP8.11□□□□□ -1.11
SMG8-203ENST00000578922 KRTAP10-7P60409 375 aaPredicted RBP8.07□□□□□ -1.12
SMG8-203ENST00000578922 LCE3AQ5TA76 89 aa7.97□□□□□ -1.13
SMG8-203ENST00000578922 KRTAP19-6Q3LI70 58 aa7.95□□□□□ -1.14
SMG8-203ENST00000578922 KRTAP10-12P60413 245 aa7.94□□□□□ -1.14
SMG8-203ENST00000578922 KRTAP8-1Q8IUC2 63 aa7.88□□□□□ -1.15
SMG8-203ENST00000578922 KMT2DO14686 5537 aa7.88□□□□□ -1.15
SMG8-203ENST00000578922 KRTAP9-2Q9BYQ4 174 aa7.87□□□□□ -1.15
SMG8-203ENST00000578922 FCGBPQ9Y6R7 5405 aaPredicted RBP7.78□□□□□ -1.16
SMG8-203ENST00000578922 KRTAP4-8A0A0G2JLE6 195 aa7.77□□□□□ -1.17
SMG8-203ENST00000578922 KRTAP4-8Q9BYQ9 185 aa7.77□□□□□ -1.17
SMG8-203ENST00000578922 KRTAP12-3P60328 96 aa7.64□□□□□ -1.19
SMG8-203ENST00000578922 KRTAP19-5Q3LI72 72 aa7.59□□□□□ -1.2
SMG8-203ENST00000578922 CRCT1Q9UGL9 99 aa7.59□□□□□ -1.2
SMG8-203ENST00000578922 KRTAP19-7Q3SYF9 63 aa7.44□□□□□ -1.22
SMG8-203ENST00000578922 MACF1Q9UPN3 7388 aaKnown RBP7.41□□□□□ -1.22
SMG8-203ENST00000578922 MT1EP04732 61 aa7.3□□□□□ -1.24
SMG8-203ENST00000578922 SYNE2Q8WXH0 6885 aaKnown RBP7.23□□□□□ -1.25
SMG8-203ENST00000578922 INE1O15225 51 aa7.23□□□□□ -1.25
SMG8-203ENST00000578922 MUC12Q9UKN1 5478 aa7.23□□□□□ -1.25
SMG8-203ENST00000578922 LCE3CQ5T5A8 94 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms