RNA–Protein interactions for RNA: ENST00000576924.5

SRRM2-230, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 3,314 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-230ENST00000576924 KIAA1109Q2LD37 5005 aa8.78□□□□□ -1
SRRM2-230ENST00000576924 KRTAP10-8P60410 259 aa8.75□□□□□ -1.01
SRRM2-230ENST00000576924 KRTAP10-4P60372 401 aaPredicted RBP8.74□□□□□ -1.01
SRRM2-230ENST00000576924 S4R3F8 94 aa8.74□□□□□ -1.01
SRRM2-230ENST00000576924 XP32Q5T750 250 aa8.7□□□□□ -1.02
SRRM2-230ENST00000576924 RPL37P61927 97 aaKnown RBP8.65□□□□□ -1.03
SRRM2-230ENST00000576924 P0C880 135 aa8.64□□□□□ -1.03
SRRM2-230ENST00000576924 RYR1P21817 5038 aa8.63□□□□□ -1.03
SRRM2-230ENST00000576924 RYR3Q15413 4870 aa8.61□□□□□ -1.03
SRRM2-230ENST00000576924 RYR2Q92736 4967 aa8.59□□□□□ -1.03
SRRM2-230ENST00000576924 C10orf95Q9H7T3 257 aa8.58□□□□□ -1.04
SRRM2-230ENST00000576924 HSPG2P98160 4391 aa8.57□□□□□ -1.04
SRRM2-230ENST00000576924 KRTAP13-4Q3LI77 160 aa8.55□□□□□ -1.04
SRRM2-230ENST00000576924 KRTAP21-3Q3LHN1 58 aa8.53□□□□□ -1.04
SRRM2-230ENST00000576924 J3QL48 77 aa8.53□□□□□ -1.04
SRRM2-230ENST00000576924 KRTAP17-1Q9BYP8 105 aa8.53□□□□□ -1.04
SRRM2-230ENST00000576924 KRTAP25-1Q3LHN0 102 aa8.52□□□□□ -1.04
SRRM2-230ENST00000576924 LRP2P98164 4655 aa8.51□□□□□ -1.05
SRRM2-230ENST00000576924 ROMO1P60602 79 aa8.48□□□□□ -1.05
SRRM2-230ENST00000576924 H3BS24 57 aa8.46□□□□□ -1.06
SRRM2-230ENST00000576924 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
SRRM2-230ENST00000576924 PKHD1L1Q86WI1 4243 aa8.45□□□□□ -1.06
SRRM2-230ENST00000576924 KRTAP10-6P60371 365 aaPredicted RBP8.44□□□□□ -1.06
SRRM2-230ENST00000576924 KRTAP4-5Q9BYR2 181 aa8.41□□□□□ -1.06
SRRM2-230ENST00000576924 LPAP08519 4548 aa8.4□□□□□ -1.06
SRRM2-230ENST00000576924 M0QZ58 72 aa8.4□□□□□ -1.07
SRRM2-230ENST00000576924 MT1HL1P0DM35 61 aa8.36□□□□□ -1.07
SRRM2-230ENST00000576924 R4GN34 69 aa8.36□□□□□ -1.07
SRRM2-230ENST00000576924 KRTAP12-2P59991 146 aa8.33□□□□□ -1.08
SRRM2-230ENST00000576924 KRTAP3-2Q9BYR7 98 aa8.32□□□□□ -1.08
SRRM2-230ENST00000576924 EPPK1P58107 5090 aaKnown RBP8.29□□□□□ -1.08
SRRM2-230ENST00000576924 ABCA13Q86UQ4 5058 aa8.23□□□□□ -1.09
SRRM2-230ENST00000576924 TPRXLQ17RH7 258 aa8.23□□□□□ -1.09
SRRM2-230ENST00000576924 TNXBP22105 4242 aa8.21□□□□□ -1.09
SRRM2-230ENST00000576924 SEC61BP60468 96 aaKnown RBP8.15□□□□□ -1.1
SRRM2-230ENST00000576924 KRTAP12-1P59990 96 aa8.14□□□□□ -1.11
SRRM2-230ENST00000576924 MUC2Q02817 5179 aa8.13□□□□□ -1.11
SRRM2-230ENST00000576924 CAMK2N1Q7Z7J9 78 aa8.13□□□□□ -1.11
SRRM2-230ENST00000576924 LORP23490 312 aaPredicted RBP8.04□□□□□ -1.12
SRRM2-230ENST00000576924 NDUFAF8A1L188 74 aa8.03□□□□□ -1.12
SRRM2-230ENST00000576924 HERC2O95714 4834 aa7.98□□□□□ -1.13
SRRM2-230ENST00000576924 KRTAP4-1Q9BYQ7 146 aa7.95□□□□□ -1.14
SRRM2-230ENST00000576924 M0R2T5 61 aa7.95□□□□□ -1.14
SRRM2-230ENST00000576924 HERC1Q15751 4861 aa7.76□□□□□ -1.17
SRRM2-230ENST00000576924 FAT4Q6V0I7 4981 aa7.74□□□□□ -1.17
SRRM2-230ENST00000576924 RNF213Q63HN8 5207 aa7.72□□□□□ -1.17
SRRM2-230ENST00000576924 PLAC4Q8WY50 150 aa7.62□□□□□ -1.19
SRRM2-230ENST00000576924 KRTAP15-1Q3LI76 137 aa7.57□□□□□ -1.2
SRRM2-230ENST00000576924 LUZP6Q538Z0 58 aa7.54□□□□□ -1.2
SRRM2-230ENST00000576924 PCLOQ9Y6V0 5065 aa7.49□□□□□ -1.21
SRRM2-230ENST00000576924 TNP1P09430 55 aa7.47□□□□□ -1.21
SRRM2-230ENST00000576924 MUC17Q685J3 4493 aa7.47□□□□□ -1.21
SRRM2-230ENST00000576924 KRTAP10-10P60014 251 aa7.45□□□□□ -1.22
SRRM2-230ENST00000576924 UBR4Q5T4S7 5183 aa7.44□□□□□ -1.22
SRRM2-230ENST00000576924 BIRC6Q9NR09 4857 aa7.33□□□□□ -1.24
SRRM2-230ENST00000576924 HMCN2Q8NDA2 5059 aa7.27□□□□□ -1.24
SRRM2-230ENST00000576924 KRTAP19-2Q3LHN2 52 aa7.27□□□□□ -1.25
SRRM2-230ENST00000576924 PP632Q6XCG6 107 aa7.23□□□□□ -1.25
SRRM2-230ENST00000576924 FLGP20930 4061 aaPredicted RBP7.2□□□□□ -1.26
SRRM2-230ENST00000576924 A0A0A0MQY5 61 aa7.07□□□□□ -1.28
SRRM2-230ENST00000576924 MT1HP80294 61 aa7.05□□□□□ -1.28
SRRM2-230ENST00000576924 LCE2CQ5TA81 110 aa7.04□□□□□ -1.28
SRRM2-230ENST00000576924 LCE3AQ5TA76 89 aa7.03□□□□□ -1.28
SRRM2-230ENST00000576924 MT1FP04733 61 aa7.02□□□□□ -1.28
SRRM2-230ENST00000576924 KRTAP19-1Q8IUB9 90 aa7□□□□□ -1.29
SRRM2-230ENST00000576924 MT2AP02795 61 aa6.97□□□□□ -1.29
SRRM2-230ENST00000576924 FSIP2Q5CZC0 6907 aa6.94□□□□□ -1.3
SRRM2-230ENST00000576924 USH2AO75445 5202 aa6.94□□□□□ -1.3
SRRM2-230ENST00000576924 SPRR2GQ9BYE4 73 aa6.87□□□□□ -1.31
SRRM2-230ENST00000576924 KMT2DO14686 5537 aa6.78□□□□□ -1.32
SRRM2-230ENST00000576924 KRTAP9-8Q9BYQ0 159 aa6.76□□□□□ -1.33
SRRM2-230ENST00000576924 KRTAP10-12P60413 245 aa6.72□□□□□ -1.33
SRRM2-230ENST00000576924 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
SRRM2-230ENST00000576924 KRTAP10-7P60409 375 aaPredicted RBP6.65□□□□□ -1.34
SRRM2-230ENST00000576924 MT1BP07438 61 aa6.63□□□□□ -1.35
SRRM2-230ENST00000576924 MT1XP80297 61 aa6.6□□□□□ -1.35
SRRM2-230ENST00000576924 KRTAP10-5P60370 271 aa6.59□□□□□ -1.35
SRRM2-230ENST00000576924 PRO2289Q9P1D8 64 aa6.59□□□□□ -1.35
SRRM2-230ENST00000576924 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
SRRM2-230ENST00000576924 KRTAP19-8Q3LI54 63 aa6.47□□□□□ -1.37
SRRM2-230ENST00000576924 KRTAP4-8A0A0G2JLE6 195 aa6.46□□□□□ -1.38
SRRM2-230ENST00000576924 KRTAP4-8Q9BYQ9 185 aa6.46□□□□□ -1.38
SRRM2-230ENST00000576924 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
SRRM2-230ENST00000576924 KRTAP8-1Q8IUC2 63 aa6.44□□□□□ -1.38
SRRM2-230ENST00000576924 KRTAP19-5Q3LI72 72 aa6.4□□□□□ -1.39
SRRM2-230ENST00000576924 SPRR5A0A1B0GTR4 108 aa6.37□□□□□ -1.39
SRRM2-230ENST00000576924 LCE2BO14633 110 aa6.37□□□□□ -1.39
SRRM2-230ENST00000576924 DSTQ03001 7570 aaKnown RBP6.28□□□□□ -1.4
SRRM2-230ENST00000576924 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
SRRM2-230ENST00000576924 CRCT1Q9UGL9 99 aa6.22□□□□□ -1.41
SRRM2-230ENST00000576924 OBSCNQ5VST9 7968 aa6.19□□□□□ -1.42
SRRM2-230ENST00000576924 LCE3CQ5T5A8 94 aa6.11□□□□□ -1.43
SRRM2-230ENST00000576924 FCGBPQ9Y6R7 5405 aaPredicted RBP6.1□□□□□ -1.43
SRRM2-230ENST00000576924 SYNE1Q8NF91 8797 aaKnown RBP6.09□□□□□ -1.43
SRRM2-230ENST00000576924 MUC12Q9UKN1 5478 aa6.03□□□□□ -1.44
SRRM2-230ENST00000576924 SSPOA2VEC9 5147 aa5.97□□□□□ -1.45
SRRM2-230ENST00000576924 LCE2AQ5TA79 106 aaPredicted RBP5.93□□□□□ -1.46
SRRM2-230ENST00000576924 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
SRRM2-230ENST00000576924 INE1O15225 51 aa5.87□□□□□ -1.47
SRRM2-230ENST00000576924 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 290.3 ms