RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 KRTAP4-5Q9BYR2 181 aa6.78□□□□□ -1.32
CACNA1A-202ENST00000573710 MT1HL1P0DM35 61 aa6.59□□□□□ -1.35
CACNA1A-202ENST00000573710 ALMS1Q8TCU4 4167 aa6.57□□□□□ -1.36
CACNA1A-202ENST00000573710 KRTAP3-3Q9BYR6 98 aa6.55□□□□□ -1.36
CACNA1A-202ENST00000573710 SPRR2FQ96RM1 72 aa6.53□□□□□ -1.36
CACNA1A-202ENST00000573710 KRTAP3-2Q9BYR7 98 aa6.51□□□□□ -1.37
CACNA1A-202ENST00000573710 FRAS1Q86XX4 4008 aa6.42□□□□□ -1.38
CACNA1A-202ENST00000573710 KRTAP10-4P60372 401 aaPredicted RBP6.39□□□□□ -1.39
CACNA1A-202ENST00000573710 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
CACNA1A-202ENST00000573710 DNAH2Q9P225 4427 aa6.28□□□□□ -1.4
CACNA1A-202ENST00000573710 KMT2AQ03164 3969 aa6.28□□□□□ -1.4
CACNA1A-202ENST00000573710 ANK2Q01484 3957 aa6.27□□□□□ -1.41
CACNA1A-202ENST00000573710 DNAH1Q9P2D7 4330 aa6.26□□□□□ -1.41
CACNA1A-202ENST00000573710 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
CACNA1A-202ENST00000573710 LYSTQ99698 3801 aa6.25□□□□□ -1.41
CACNA1A-202ENST00000573710 DNAH9Q9NYC9 4486 aa6.24□□□□□ -1.41
CACNA1A-202ENST00000573710 DNAH3Q8TD57 4116 aa6.23□□□□□ -1.41
CACNA1A-202ENST00000573710 SPRR2EP22531 72 aa6.21□□□□□ -1.41
CACNA1A-202ENST00000573710 SPRR2BP35325 72 aa6.21□□□□□ -1.41
CACNA1A-202ENST00000573710 SPRR2AP35326 72 aa6.21□□□□□ -1.41
CACNA1A-202ENST00000573710 DNAH10Q8IVF4 4471 aa6.21□□□□□ -1.42
CACNA1A-202ENST00000573710 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
CACNA1A-202ENST00000573710 CMYA5Q8N3K9 4069 aa6.15□□□□□ -1.42
CACNA1A-202ENST00000573710 VPS13BQ7Z7G8 4022 aa6.14□□□□□ -1.43
CACNA1A-202ENST00000573710 MT1HP80294 61 aa6.06□□□□□ -1.44
CACNA1A-202ENST00000573710 DNAH7Q8WXX0 4024 aa6.03□□□□□ -1.44
CACNA1A-202ENST00000573710 LCE3CQ5T5A8 94 aa5.98□□□□□ -1.45
CACNA1A-202ENST00000573710 SPRR2DP22532 72 aa5.98□□□□□ -1.45
CACNA1A-202ENST00000573710 FAT2Q9NYQ8 4349 aa5.96□□□□□ -1.46
CACNA1A-202ENST00000573710 KRTAP4-1Q9BYQ7 146 aa5.96□□□□□ -1.46
CACNA1A-202ENST00000573710 DNAH8Q96JB1 4490 aa5.89□□□□□ -1.47
CACNA1A-202ENST00000573710 PLECQ15149 4684 aaKnown RBP5.86□□□□□ -1.47
CACNA1A-202ENST00000573710 MT2AP02795 61 aa5.86□□□□□ -1.47
CACNA1A-202ENST00000573710 PRKDCP78527 4128 aaKnown RBP5.85□□□□□ -1.47
CACNA1A-202ENST00000573710 LCE2BO14633 110 aa5.85□□□□□ -1.47
CACNA1A-202ENST00000573710 DNAH11Q96DT5 4516 aa5.85□□□□□ -1.47
CACNA1A-202ENST00000573710 KRTAP12-4P60329 112 aa5.83□□□□□ -1.48
CACNA1A-202ENST00000573710 MT1GP13640 62 aa5.83□□□□□ -1.48
CACNA1A-202ENST00000573710 DNAH6Q9C0G6 4158 aa5.83□□□□□ -1.48
CACNA1A-202ENST00000573710 STARD9Q9P2P6 4700 aa5.78□□□□□ -1.48
CACNA1A-202ENST00000573710 DNAH5Q8TE73 4624 aa5.78□□□□□ -1.48
CACNA1A-202ENST00000573710 MT1FP04733 61 aa5.77□□□□□ -1.49
CACNA1A-202ENST00000573710 HECTD4Q9Y4D8 3996 aa5.77□□□□□ -1.49
CACNA1A-202ENST00000573710 DNAH17Q9UFH2 4485 aa5.77□□□□□ -1.49
CACNA1A-202ENST00000573710 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
CACNA1A-202ENST00000573710 DYNC2H1Q8NCM8 4307 aaKnown RBP5.73□□□□□ -1.49
CACNA1A-202ENST00000573710 VPS13DQ5THJ4 4388 aa5.71□□□□□ -1.5
CACNA1A-202ENST00000573710 SPRR2GQ9BYE4 73 aa5.68□□□□□ -1.5
CACNA1A-202ENST00000573710 LRP1BQ9NZR2 4599 aa5.67□□□□□ -1.5
CACNA1A-202ENST00000573710 LCE3EQ5T5B0 92 aa5.64□□□□□ -1.51
CACNA1A-202ENST00000573710 LCE2CQ5TA81 110 aa5.62□□□□□ -1.51
CACNA1A-202ENST00000573710 LCE3DQ9BYE3 92 aa5.56□□□□□ -1.52
CACNA1A-202ENST00000573710 MT4P47944 62 aa5.55□□□□□ -1.52
CACNA1A-202ENST00000573710 LCE2DQ5TA82 110 aaPredicted RBP5.54□□□□□ -1.52
CACNA1A-202ENST00000573710 FAT1Q14517 4588 aa5.53□□□□□ -1.52
CACNA1A-202ENST00000573710 LCE1BQ5T7P3 118 aa5.48□□□□□ -1.53
CACNA1A-202ENST00000573710 FLGP20930 4061 aaPredicted RBP5.48□□□□□ -1.53
CACNA1A-202ENST00000573710 KRTAP4-8A0A0G2JLE6 195 aa5.41□□□□□ -1.54
CACNA1A-202ENST00000573710 KRTAP4-8Q9BYQ9 185 aa5.41□□□□□ -1.54
CACNA1A-202ENST00000573710 APOBP04114 4563 aaKnown RBP5.39□□□□□ -1.55
CACNA1A-202ENST00000573710 SACSQ9NZJ4 4579 aa5.38□□□□□ -1.55
CACNA1A-202ENST00000573710 LCE1DQ5T752 114 aa5.35□□□□□ -1.55
CACNA1A-202ENST00000573710 PKHD1P08F94 4074 aa5.32□□□□□ -1.56
CACNA1A-202ENST00000573710 LPAP08519 4548 aa5.31□□□□□ -1.56
CACNA1A-202ENST00000573710 PKD1P98161 4303 aa5.3□□□□□ -1.56
CACNA1A-202ENST00000573710 FAT3Q8TDW7 4589 aa5.3□□□□□ -1.56
CACNA1A-202ENST00000573710 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
CACNA1A-202ENST00000573710 PRM1P04553 51 aa5.3□□□□□ -1.56
CACNA1A-202ENST00000573710 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
CACNA1A-202ENST00000573710 DYNC1H1Q14204 4646 aaKnown RBP5.26□□□□□ -1.57
CACNA1A-202ENST00000573710 HSPG2P98160 4391 aa5.2□□□□□ -1.58
CACNA1A-202ENST00000573710 KRTAP17-1Q9BYP8 105 aa5.19□□□□□ -1.58
CACNA1A-202ENST00000573710 MT1XP80297 61 aa5.19□□□□□ -1.58
CACNA1A-202ENST00000573710 PKHD1L1Q86WI1 4243 aa5.19□□□□□ -1.58
CACNA1A-202ENST00000573710 MYCBP2O75592 4640 aa5.19□□□□□ -1.58
CACNA1A-202ENST00000573710 DNHD1Q96M86 4753 aa5.16□□□□□ -1.58
CACNA1A-202ENST00000573710 LCE5AQ5TCM9 118 aa5.15□□□□□ -1.58
CACNA1A-202ENST00000573710 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
CACNA1A-202ENST00000573710 LRP1Q07954 4544 aaKnown RBP5.14□□□□□ -1.59
CACNA1A-202ENST00000573710 TNXBP22105 4242 aa5.09□□□□□ -1.59
CACNA1A-202ENST00000573710 RYR1P21817 5038 aa5.06□□□□□ -1.6
CACNA1A-202ENST00000573710 KRTAP19-8Q3LI54 63 aa5.03□□□□□ -1.6
CACNA1A-202ENST00000573710 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
CACNA1A-202ENST00000573710 LCE1CQ5T751 118 aa5.01□□□□□ -1.61
CACNA1A-202ENST00000573710 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
CACNA1A-202ENST00000573710 LCE1FQ5T754 118 aa5.01□□□□□ -1.61
CACNA1A-202ENST00000573710 LCE1AQ5T7P2 110 aa5.01□□□□□ -1.61
CACNA1A-202ENST00000573710 KRTAP9-8Q9BYQ0 159 aa5□□□□□ -1.61
CACNA1A-202ENST00000573710 MT1BP07438 61 aa4.99□□□□□ -1.61
CACNA1A-202ENST00000573710 KRTAP19-3Q7Z4W3 81 aa4.99□□□□□ -1.61
CACNA1A-202ENST00000573710 MT3P25713 68 aa4.93□□□□□ -1.62
CACNA1A-202ENST00000573710 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
CACNA1A-202ENST00000573710 KRTAP9-3Q9BYQ3 159 aa4.86□□□□□ -1.63
CACNA1A-202ENST00000573710 KRTAP4-3Q9BYR4 195 aa4.85□□□□□ -1.63
CACNA1A-202ENST00000573710 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
CACNA1A-202ENST00000573710 KRTAP9-2Q9BYQ4 174 aa4.81□□□□□ -1.64
CACNA1A-202ENST00000573710 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
CACNA1A-202ENST00000573710 RYR3Q15413 4870 aa4.79□□□□□ -1.64
CACNA1A-202ENST00000573710 MT1LQ93083 61 aa4.79□□□□□ -1.64
CACNA1A-202ENST00000573710 KRTAP19-6Q3LI70 58 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms