RNA–Protein interactions for RNA: ENST00000572221.5

EDC4-204, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-204ENST00000572221 ALMS1Q8TCU4 4167 aa8.7□□□□□ -1.02
EDC4-204ENST00000572221 LORP23490 312 aaPredicted RBP8.7□□□□□ -1.02
EDC4-204ENST00000572221 ZNF469Q96JG9 3925 aaPredicted RBP8.55□□□□□ -1.04
EDC4-204ENST00000572221 KRTAP8-1Q8IUC2 63 aa8.51□□□□□ -1.05
EDC4-204ENST00000572221 DNAH5Q8TE73 4624 aa8.48□□□□□ -1.05
EDC4-204ENST00000572221 KRTAP4-1Q9BYQ7 146 aa8.38□□□□□ -1.07
EDC4-204ENST00000572221 DNAH9Q9NYC9 4486 aa8.38□□□□□ -1.07
EDC4-204ENST00000572221 PLECQ15149 4684 aaKnown RBP8.38□□□□□ -1.07
EDC4-204ENST00000572221 MT1HP80294 61 aa8.36□□□□□ -1.07
EDC4-204ENST00000572221 DNAH10Q8IVF4 4471 aa8.3□□□□□ -1.08
EDC4-204ENST00000572221 DNAH11Q96DT5 4516 aa8.29□□□□□ -1.08
EDC4-204ENST00000572221 AKAP9Q99996 3911 aa8.28□□□□□ -1.08
EDC4-204ENST00000572221 SPRR2GQ9BYE4 73 aa8.28□□□□□ -1.08
EDC4-204ENST00000572221 MT2AP02795 61 aa8.27□□□□□ -1.09
EDC4-204ENST00000572221 DNAH1Q9P2D7 4330 aa8.25□□□□□ -1.09
EDC4-204ENST00000572221 KRTAP10-5P60370 271 aa8.23□□□□□ -1.09
EDC4-204ENST00000572221 DNAH2Q9P225 4427 aa8.18□□□□□ -1.1
EDC4-204ENST00000572221 FAT1Q14517 4588 aa8.09□□□□□ -1.11
EDC4-204ENST00000572221 MT1FP04733 61 aa8.06□□□□□ -1.12
EDC4-204ENST00000572221 DNHD1Q96M86 4753 aa8.04□□□□□ -1.12
EDC4-204ENST00000572221 DNAH17Q9UFH2 4485 aa8.01□□□□□ -1.13
EDC4-204ENST00000572221 DYNC1H1Q14204 4646 aaKnown RBP8.01□□□□□ -1.13
EDC4-204ENST00000572221 VPS13DQ5THJ4 4388 aa7.99□□□□□ -1.13
EDC4-204ENST00000572221 CSMD3Q7Z407 3707 aa7.97□□□□□ -1.13
EDC4-204ENST00000572221 KRTAP19-4Q3LI73 84 aa7.95□□□□□ -1.14
EDC4-204ENST00000572221 RYR1P21817 5038 aa7.91□□□□□ -1.14
EDC4-204ENST00000572221 LRP1BQ9NZR2 4599 aa7.89□□□□□ -1.15
EDC4-204ENST00000572221 KRTAP10-7P60409 375 aaPredicted RBP7.87□□□□□ -1.15
EDC4-204ENST00000572221 SPRR2FQ96RM1 72 aa7.87□□□□□ -1.15
EDC4-204ENST00000572221 KRTAP19-5Q3LI72 72 aa7.87□□□□□ -1.15
EDC4-204ENST00000572221 SACSQ9NZJ4 4579 aa7.83□□□□□ -1.16
EDC4-204ENST00000572221 LCE3CQ5T5A8 94 aa7.79□□□□□ -1.16
EDC4-204ENST00000572221 DNAH8Q96JB1 4490 aa7.76□□□□□ -1.17
EDC4-204ENST00000572221 FAT2Q9NYQ8 4349 aa7.76□□□□□ -1.17
EDC4-204ENST00000572221 DYNC2H1Q8NCM8 4307 aaKnown RBP7.73□□□□□ -1.17
EDC4-204ENST00000572221 KRTAP19-8Q3LI54 63 aa7.71□□□□□ -1.18
EDC4-204ENST00000572221 STARD9Q9P2P6 4700 aa7.63□□□□□ -1.19
EDC4-204ENST00000572221 KRTAP19-1Q8IUB9 90 aa7.62□□□□□ -1.19
EDC4-204ENST00000572221 APOBP04114 4563 aaKnown RBP7.61□□□□□ -1.19
EDC4-204ENST00000572221 DNAH3Q8TD57 4116 aa7.53□□□□□ -1.2
EDC4-204ENST00000572221 RYR3Q15413 4870 aa7.5□□□□□ -1.21
EDC4-204ENST00000572221 ANK2Q01484 3957 aa7.5□□□□□ -1.21
EDC4-204ENST00000572221 LRP1Q07954 4544 aaKnown RBP7.46□□□□□ -1.22
EDC4-204ENST00000572221 MT1XP80297 61 aa7.41□□□□□ -1.22
EDC4-204ENST00000572221 KRTAP17-1Q9BYP8 105 aa7.41□□□□□ -1.22
EDC4-204ENST00000572221 KIAA1109Q2LD37 5005 aa7.41□□□□□ -1.22
EDC4-204ENST00000572221 SPRR2EP22531 72 aa7.37□□□□□ -1.23
EDC4-204ENST00000572221 SPRR2BP35325 72 aa7.37□□□□□ -1.23
EDC4-204ENST00000572221 SPRR2AP35326 72 aa7.37□□□□□ -1.23
EDC4-204ENST00000572221 PRKDCP78527 4128 aaKnown RBP7.37□□□□□ -1.23
EDC4-204ENST00000572221 FAT3Q8TDW7 4589 aa7.36□□□□□ -1.23
EDC4-204ENST00000572221 MT1BP07438 61 aa7.36□□□□□ -1.23
EDC4-204ENST00000572221 RYR2Q92736 4967 aa7.33□□□□□ -1.24
EDC4-204ENST00000572221 KRTAP9-8Q9BYQ0 159 aa7.32□□□□□ -1.24
EDC4-204ENST00000572221 VPS13BQ7Z7G8 4022 aa7.32□□□□□ -1.24
EDC4-204ENST00000572221 CMYA5Q8N3K9 4069 aa7.31□□□□□ -1.24
EDC4-204ENST00000572221 HERC1Q15751 4861 aa7.26□□□□□ -1.25
EDC4-204ENST00000572221 MYCBP2O75592 4640 aa7.24□□□□□ -1.25
EDC4-204ENST00000572221 LYSTQ99698 3801 aa7.24□□□□□ -1.25
EDC4-204ENST00000572221 KMT2AQ03164 3969 aa7.23□□□□□ -1.25
EDC4-204ENST00000572221 MT1GP13640 62 aa7.19□□□□□ -1.26
EDC4-204ENST00000572221 KRTAP9-3Q9BYQ3 159 aa7.18□□□□□ -1.26
EDC4-204ENST00000572221 LCE2CQ5TA81 110 aa7.17□□□□□ -1.26
EDC4-204ENST00000572221 DNAH6Q9C0G6 4158 aa7.16□□□□□ -1.26
EDC4-204ENST00000572221 LCE2BO14633 110 aa7.15□□□□□ -1.26
EDC4-204ENST00000572221 SPRR2DP22532 72 aa7.14□□□□□ -1.27
EDC4-204ENST00000572221 LCE3BQ5TA77 95 aa7.14□□□□□ -1.27
EDC4-204ENST00000572221 HSPG2P98160 4391 aa7.1□□□□□ -1.27
EDC4-204ENST00000572221 DNAH7Q8WXX0 4024 aa7.1□□□□□ -1.27
EDC4-204ENST00000572221 KRTAP12-4P60329 112 aa7.1□□□□□ -1.27
EDC4-204ENST00000572221 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
EDC4-204ENST00000572221 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
EDC4-204ENST00000572221 FRAS1Q86XX4 4008 aa7.04□□□□□ -1.28
EDC4-204ENST00000572221 SPRR5A0A1B0GTR4 108 aa7.04□□□□□ -1.28
EDC4-204ENST00000572221 HERC2O95714 4834 aa7.02□□□□□ -1.29
EDC4-204ENST00000572221 PKD1P98161 4303 aa7□□□□□ -1.29
EDC4-204ENST00000572221 HECTD4Q9Y4D8 3996 aa6.99□□□□□ -1.29
EDC4-204ENST00000572221 BIRC6Q9NR09 4857 aa6.97□□□□□ -1.29
EDC4-204ENST00000572221 PCLOQ9Y6V0 5065 aa6.92□□□□□ -1.3
EDC4-204ENST00000572221 KRTAP19-3Q7Z4W3 81 aa6.87□□□□□ -1.31
EDC4-204ENST00000572221 LCE3DQ9BYE3 92 aa6.84□□□□□ -1.31
EDC4-204ENST00000572221 HYDINQ4G0P3 5121 aa6.82□□□□□ -1.32
EDC4-204ENST00000572221 KRTAP19-2Q3LHN2 52 aa6.8□□□□□ -1.32
EDC4-204ENST00000572221 LRP2P98164 4655 aa6.79□□□□□ -1.32
EDC4-204ENST00000572221 MT1LQ93083 61 aa6.78□□□□□ -1.32
EDC4-204ENST00000572221 LCE3EQ5T5B0 92 aa6.76□□□□□ -1.33
EDC4-204ENST00000572221 PKHD1L1Q86WI1 4243 aa6.74□□□□□ -1.33
EDC4-204ENST00000572221 MT1EP04732 61 aa6.72□□□□□ -1.33
EDC4-204ENST00000572221 PKHD1P08F94 4074 aa6.71□□□□□ -1.33
EDC4-204ENST00000572221 EPPK1P58107 5090 aaKnown RBP6.65□□□□□ -1.35
EDC4-204ENST00000572221 KRTAP19-6Q3LI70 58 aa6.58□□□□□ -1.36
EDC4-204ENST00000572221 KRTAP4-7Q9BYR0 210 aa6.57□□□□□ -1.36
EDC4-204ENST00000572221 LCE2DQ5TA82 110 aaPredicted RBP6.55□□□□□ -1.36
EDC4-204ENST00000572221 MT1MQ8N339 61 aa6.52□□□□□ -1.37
EDC4-204ENST00000572221 MUC17Q685J3 4493 aa6.51□□□□□ -1.37
EDC4-204ENST00000572221 KMT2CQ8NEZ4 4911 aaKnown RBP6.47□□□□□ -1.37
EDC4-204ENST00000572221 MT3P25713 68 aa6.46□□□□□ -1.38
EDC4-204ENST00000572221 ABCA13Q86UQ4 5058 aa6.4□□□□□ -1.38
EDC4-204ENST00000572221 FLGP20930 4061 aaPredicted RBP6.39□□□□□ -1.39
EDC4-204ENST00000572221 SYNE1Q8NF91 8797 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms