RNA–Protein interactions for RNA: ENST00000569796.1

E4F1-209, Transcript of E4F transcription factor 1, humanhuman

TSL 2

Gene E4F1, Length 5,931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-209ENST00000569796 CSMD3Q7Z407 3707 aa7.19□□□□□ -1.26
E4F1-209ENST00000569796 ALMS1Q8TCU4 4167 aa7.17□□□□□ -1.26
E4F1-209ENST00000569796 LORP23490 312 aaPredicted RBP7.15□□□□□ -1.27
E4F1-209ENST00000569796 KRTAP10-5P60370 271 aa7.14□□□□□ -1.27
E4F1-209ENST00000569796 KRTAP8-1Q8IUC2 63 aa7.14□□□□□ -1.27
E4F1-209ENST00000569796 ZNF469Q96JG9 3925 aaPredicted RBP7.08□□□□□ -1.28
E4F1-209ENST00000569796 AKAP9Q99996 3911 aa6.99□□□□□ -1.29
E4F1-209ENST00000569796 DNAH9Q9NYC9 4486 aa6.98□□□□□ -1.29
E4F1-209ENST00000569796 DNAH5Q8TE73 4624 aa6.88□□□□□ -1.31
E4F1-209ENST00000569796 MT1HP80294 61 aa6.79□□□□□ -1.32
E4F1-209ENST00000569796 DNAH1Q9P2D7 4330 aa6.78□□□□□ -1.32
E4F1-209ENST00000569796 KRTAP4-1Q9BYQ7 146 aa6.78□□□□□ -1.32
E4F1-209ENST00000569796 DNHD1Q96M86 4753 aa6.75□□□□□ -1.33
E4F1-209ENST00000569796 PLECQ15149 4684 aaKnown RBP6.73□□□□□ -1.33
E4F1-209ENST00000569796 MT2AP02795 61 aa6.68□□□□□ -1.34
E4F1-209ENST00000569796 DNAH10Q8IVF4 4471 aa6.67□□□□□ -1.34
E4F1-209ENST00000569796 DNAH11Q96DT5 4516 aa6.67□□□□□ -1.34
E4F1-209ENST00000569796 SPRR2FQ96RM1 72 aa6.65□□□□□ -1.34
E4F1-209ENST00000569796 KRTAP10-7P60409 375 aaPredicted RBP6.61□□□□□ -1.35
E4F1-209ENST00000569796 DNAH2Q9P225 4427 aa6.61□□□□□ -1.35
E4F1-209ENST00000569796 SPRR2GQ9BYE4 73 aa6.58□□□□□ -1.36
E4F1-209ENST00000569796 VPS13DQ5THJ4 4388 aa6.56□□□□□ -1.36
E4F1-209ENST00000569796 DYNC1H1Q14204 4646 aaKnown RBP6.54□□□□□ -1.36
E4F1-209ENST00000569796 DNAH17Q9UFH2 4485 aa6.54□□□□□ -1.36
E4F1-209ENST00000569796 MT1FP04733 61 aa6.54□□□□□ -1.36
E4F1-209ENST00000569796 KRTAP19-5Q3LI72 72 aa6.52□□□□□ -1.37
E4F1-209ENST00000569796 LRP1BQ9NZR2 4599 aa6.51□□□□□ -1.37
E4F1-209ENST00000569796 FAT1Q14517 4588 aa6.47□□□□□ -1.37
E4F1-209ENST00000569796 STARD9Q9P2P6 4700 aa6.44□□□□□ -1.38
E4F1-209ENST00000569796 RYR1P21817 5038 aa6.44□□□□□ -1.38
E4F1-209ENST00000569796 LCE3CQ5T5A8 94 aa6.42□□□□□ -1.38
E4F1-209ENST00000569796 FAT2Q9NYQ8 4349 aa6.41□□□□□ -1.38
E4F1-209ENST00000569796 DNAH3Q8TD57 4116 aa6.38□□□□□ -1.39
E4F1-209ENST00000569796 PRKDCP78527 4128 aaKnown RBP6.34□□□□□ -1.39
E4F1-209ENST00000569796 SACSQ9NZJ4 4579 aa6.33□□□□□ -1.4
E4F1-209ENST00000569796 DYNC2H1Q8NCM8 4307 aaKnown RBP6.33□□□□□ -1.4
E4F1-209ENST00000569796 KRTAP19-4Q3LI73 84 aa6.32□□□□□ -1.4
E4F1-209ENST00000569796 KMT2AQ03164 3969 aa6.29□□□□□ -1.4
E4F1-209ENST00000569796 DNAH8Q96JB1 4490 aa6.29□□□□□ -1.4
E4F1-209ENST00000569796 VPS13BQ7Z7G8 4022 aa6.29□□□□□ -1.4
E4F1-209ENST00000569796 SPRR2EP22531 72 aa6.27□□□□□ -1.41
E4F1-209ENST00000569796 SPRR2BP35325 72 aa6.27□□□□□ -1.41
E4F1-209ENST00000569796 SPRR2AP35326 72 aa6.27□□□□□ -1.41
E4F1-209ENST00000569796 CMYA5Q8N3K9 4069 aa6.25□□□□□ -1.41
E4F1-209ENST00000569796 LYSTQ99698 3801 aa6.24□□□□□ -1.41
E4F1-209ENST00000569796 ANK2Q01484 3957 aa6.24□□□□□ -1.41
E4F1-209ENST00000569796 APOBP04114 4563 aaKnown RBP6.19□□□□□ -1.42
E4F1-209ENST00000569796 KRTAP17-1Q9BYP8 105 aa6.14□□□□□ -1.43
E4F1-209ENST00000569796 RYR3Q15413 4870 aa6.12□□□□□ -1.43
E4F1-209ENST00000569796 FRAS1Q86XX4 4008 aa6.11□□□□□ -1.43
E4F1-209ENST00000569796 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
E4F1-209ENST00000569796 SPRR2DP22532 72 aa6.06□□□□□ -1.44
E4F1-209ENST00000569796 KRTAP19-8Q3LI54 63 aa6.06□□□□□ -1.44
E4F1-209ENST00000569796 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
E4F1-209ENST00000569796 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
E4F1-209ENST00000569796 DNAH6Q9C0G6 4158 aa6□□□□□ -1.45
E4F1-209ENST00000569796 KIAA1109Q2LD37 5005 aa6□□□□□ -1.45
E4F1-209ENST00000569796 MYCBP2O75592 4640 aa6□□□□□ -1.45
E4F1-209ENST00000569796 MT1GP13640 62 aa6□□□□□ -1.45
E4F1-209ENST00000569796 LCE2BO14633 110 aa5.98□□□□□ -1.45
E4F1-209ENST00000569796 FAT3Q8TDW7 4589 aa5.97□□□□□ -1.45
E4F1-209ENST00000569796 DNAH7Q8WXX0 4024 aa5.95□□□□□ -1.46
E4F1-209ENST00000569796 HECTD4Q9Y4D8 3996 aa5.95□□□□□ -1.46
E4F1-209ENST00000569796 MT1XP80297 61 aa5.94□□□□□ -1.46
E4F1-209ENST00000569796 LRP1Q07954 4544 aaKnown RBP5.89□□□□□ -1.47
E4F1-209ENST00000569796 RYR2Q92736 4967 aa5.86□□□□□ -1.47
E4F1-209ENST00000569796 MT1BP07438 61 aa5.85□□□□□ -1.47
E4F1-209ENST00000569796 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.48
E4F1-209ENST00000569796 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.48
E4F1-209ENST00000569796 KRTAP9-8Q9BYQ0 159 aa5.79□□□□□ -1.48
E4F1-209ENST00000569796 HERC1Q15751 4861 aa5.78□□□□□ -1.48
E4F1-209ENST00000569796 HERC2O95714 4834 aa5.74□□□□□ -1.49
E4F1-209ENST00000569796 LCE3DQ9BYE3 92 aa5.74□□□□□ -1.49
E4F1-209ENST00000569796 SPRR5A0A1B0GTR4 108 aa5.72□□□□□ -1.49
E4F1-209ENST00000569796 HSPG2P98160 4391 aa5.71□□□□□ -1.49
E4F1-209ENST00000569796 HYDINQ4G0P3 5121 aa5.71□□□□□ -1.49
E4F1-209ENST00000569796 KRTAP9-3Q9BYQ3 159 aa5.68□□□□□ -1.5
E4F1-209ENST00000569796 BIRC6Q9NR09 4857 aa5.68□□□□□ -1.5
E4F1-209ENST00000569796 LPAP08519 4548 aa5.67□□□□□ -1.5
E4F1-209ENST00000569796 LCE3EQ5T5B0 92 aa5.66□□□□□ -1.5
E4F1-209ENST00000569796 LCE2CQ5TA81 110 aa5.64□□□□□ -1.51
E4F1-209ENST00000569796 PKD1P98161 4303 aa5.63□□□□□ -1.51
E4F1-209ENST00000569796 PKHD1P08F94 4074 aa5.61□□□□□ -1.51
E4F1-209ENST00000569796 LRP2P98164 4655 aa5.61□□□□□ -1.51
E4F1-209ENST00000569796 PCLOQ9Y6V0 5065 aa5.57□□□□□ -1.52
E4F1-209ENST00000569796 LCE2DQ5TA82 110 aaPredicted RBP5.56□□□□□ -1.52
E4F1-209ENST00000569796 KRTAP19-3Q7Z4W3 81 aa5.55□□□□□ -1.52
E4F1-209ENST00000569796 PKHD1L1Q86WI1 4243 aa5.55□□□□□ -1.52
E4F1-209ENST00000569796 KRTAP4-7Q9BYR0 210 aa5.5□□□□□ -1.53
E4F1-209ENST00000569796 MT1LQ93083 61 aa5.44□□□□□ -1.54
E4F1-209ENST00000569796 MT4P47944 62 aa5.41□□□□□ -1.54
E4F1-209ENST00000569796 MT1EP04732 61 aa5.39□□□□□ -1.55
E4F1-209ENST00000569796 PRM1P04553 51 aa5.36□□□□□ -1.55
E4F1-209ENST00000569796 TNXBP22105 4242 aa5.36□□□□□ -1.55
E4F1-209ENST00000569796 KRTAP19-2Q3LHN2 52 aa5.34□□□□□ -1.56
E4F1-209ENST00000569796 MT3P25713 68 aa5.32□□□□□ -1.56
E4F1-209ENST00000569796 KMT2CQ8NEZ4 4911 aaKnown RBP5.31□□□□□ -1.56
E4F1-209ENST00000569796 FSIP2Q5CZC0 6907 aa5.31□□□□□ -1.56
E4F1-209ENST00000569796 KRTAP9-2Q9BYQ4 174 aa5.31□□□□□ -1.56
E4F1-209ENST00000569796 MT1MQ8N339 61 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms