RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 KRTAP3-1Q9BYR8 98 aa9.4□□□□□ -0.9
CMTM3-214ENST00000567572 H3BS24 57 aa9.39□□□□□ -0.91
CMTM3-214ENST00000567572 COX6B2Q6YFQ2 88 aa9.37□□□□□ -0.91
CMTM3-214ENST00000567572 BIRC6Q9NR09 4857 aa9.3□□□□□ -0.92
CMTM3-214ENST00000567572 LINC01554Q52M75 96 aa9.29□□□□□ -0.92
CMTM3-214ENST00000567572 XP32Q5T750 250 aa9.28□□□□□ -0.92
CMTM3-214ENST00000567572 RPL37P61927 97 aaKnown RBP9.27□□□□□ -0.93
CMTM3-214ENST00000567572 A0A1B0GU33 70 aa9.23□□□□□ -0.93
CMTM3-214ENST00000567572 ABCA13Q86UQ4 5058 aa9.23□□□□□ -0.93
CMTM3-214ENST00000567572 HERC2O95714 4834 aa9.21□□□□□ -0.93
CMTM3-214ENST00000567572 H1FX-AS1Q4G0G2 97 aa9.21□□□□□ -0.93
CMTM3-214ENST00000567572 H0YAA0 97 aa9.21□□□□□ -0.94
CMTM3-214ENST00000567572 TPRXLQ17RH7 258 aa9.18□□□□□ -0.94
CMTM3-214ENST00000567572 PRAC1Q96KF2 57 aa9.15□□□□□ -0.94
CMTM3-214ENST00000567572 J3QL48 77 aa9.08□□□□□ -0.96
CMTM3-214ENST00000567572 ADM2Q7Z4H4 148 aa9.07□□□□□ -0.96
CMTM3-214ENST00000567572 KRTAP3-3Q9BYR6 98 aa9.03□□□□□ -0.96
CMTM3-214ENST00000567572 S4R3F8 94 aa9.01□□□□□ -0.97
CMTM3-214ENST00000567572 K7ERS5 55 aa9.01□□□□□ -0.97
CMTM3-214ENST00000567572 LRP2P98164 4655 aa9□□□□□ -0.97
CMTM3-214ENST00000567572 LPAP08519 4548 aa9□□□□□ -0.97
CMTM3-214ENST00000567572 KRTAP10-6P60371 365 aaPredicted RBP8.95□□□□□ -0.98
CMTM3-214ENST00000567572 CSAG1Q6PB30 78 aa8.91□□□□□ -0.98
CMTM3-214ENST00000567572 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
CMTM3-214ENST00000567572 SEC61BP60468 96 aaKnown RBP8.82□□□□□ -1
CMTM3-214ENST00000567572 PCLOQ9Y6V0 5065 aa8.82□□□□□ -1
CMTM3-214ENST00000567572 KRTAP25-1Q3LHN0 102 aa8.78□□□□□ -1
CMTM3-214ENST00000567572 KRTAP13-4Q3LI77 160 aa8.77□□□□□ -1.01
CMTM3-214ENST00000567572 P0C880 135 aa8.72□□□□□ -1.01
CMTM3-214ENST00000567572 ROMO1P60602 79 aa8.72□□□□□ -1.01
CMTM3-214ENST00000567572 HERC1Q15751 4861 aa8.69□□□□□ -1.02
CMTM3-214ENST00000567572 KRTAP4-1Q9BYQ7 146 aa8.68□□□□□ -1.02
CMTM3-214ENST00000567572 MUC17Q685J3 4493 aa8.68□□□□□ -1.02
CMTM3-214ENST00000567572 A0A0D9SG42 100 aa8.66□□□□□ -1.02
CMTM3-214ENST00000567572 M0QZ58 72 aa8.64□□□□□ -1.03
CMTM3-214ENST00000567572 HMCN2Q8NDA2 5059 aa8.63□□□□□ -1.03
CMTM3-214ENST00000567572 KRTAP19-2Q3LHN2 52 aa8.51□□□□□ -1.05
CMTM3-214ENST00000567572 KRTAP12-1P59990 96 aa8.5□□□□□ -1.05
CMTM3-214ENST00000567572 KRTAP12-2P59991 146 aa8.5□□□□□ -1.05
CMTM3-214ENST00000567572 CRIPTQ9P021 101 aa8.42□□□□□ -1.06
CMTM3-214ENST00000567572 SPINT4Q6UDR6 99 aa8.42□□□□□ -1.06
CMTM3-214ENST00000567572 MUC2Q02817 5179 aa8.38□□□□□ -1.07
CMTM3-214ENST00000567572 R4GN34 69 aa8.35□□□□□ -1.07
CMTM3-214ENST00000567572 FLGP20930 4061 aaPredicted RBP8.26□□□□□ -1.09
CMTM3-214ENST00000567572 C10orf95Q9H7T3 257 aa8.22□□□□□ -1.09
CMTM3-214ENST00000567572 LCE2CQ5TA81 110 aa8.21□□□□□ -1.1
CMTM3-214ENST00000567572 UBR4Q5T4S7 5183 aa8.18□□□□□ -1.1
CMTM3-214ENST00000567572 RNF213Q63HN8 5207 aa8.15□□□□□ -1.1
CMTM3-214ENST00000567572 A0A0A0MQY5 61 aa8.13□□□□□ -1.11
CMTM3-214ENST00000567572 LORP23490 312 aaPredicted RBP8.11□□□□□ -1.11
CMTM3-214ENST00000567572 KRTAP15-1Q3LI76 137 aa8.05□□□□□ -1.12
CMTM3-214ENST00000567572 FAT4Q6V0I7 4981 aa8.04□□□□□ -1.12
CMTM3-214ENST00000567572 NDUFAF8A1L188 74 aa8.01□□□□□ -1.13
CMTM3-214ENST00000567572 MT1HP80294 61 aa8.01□□□□□ -1.13
CMTM3-214ENST00000567572 M0R2T5 61 aa7.9□□□□□ -1.14
CMTM3-214ENST00000567572 CAMK2N1Q7Z7J9 78 aa7.9□□□□□ -1.14
CMTM3-214ENST00000567572 PP632Q6XCG6 107 aa7.88□□□□□ -1.15
CMTM3-214ENST00000567572 MT2AP02795 61 aa7.75□□□□□ -1.17
CMTM3-214ENST00000567572 KRTAP9-8Q9BYQ0 159 aa7.75□□□□□ -1.17
CMTM3-214ENST00000567572 MT1FP04733 61 aa7.72□□□□□ -1.17
CMTM3-214ENST00000567572 SPRR2GQ9BYE4 73 aa7.71□□□□□ -1.18
CMTM3-214ENST00000567572 KRTAP23-1A1A580 65 aa7.7□□□□□ -1.18
CMTM3-214ENST00000567572 LUZP6Q538Z0 58 aa7.68□□□□□ -1.18
CMTM3-214ENST00000567572 KRTAP19-1Q8IUB9 90 aa7.68□□□□□ -1.18
CMTM3-214ENST00000567572 PLAC4Q8WY50 150 aa7.67□□□□□ -1.18
CMTM3-214ENST00000567572 KRTAP10-10P60014 251 aa7.66□□□□□ -1.18
CMTM3-214ENST00000567572 TNP1P09430 55 aa7.65□□□□□ -1.18
CMTM3-214ENST00000567572 LCE2AQ5TA79 106 aaPredicted RBP7.53□□□□□ -1.2
CMTM3-214ENST00000567572 KRTAP19-8Q3LI54 63 aa7.46□□□□□ -1.21
CMTM3-214ENST00000567572 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.22
CMTM3-214ENST00000567572 MT1BP07438 61 aa7.36□□□□□ -1.23
CMTM3-214ENST00000567572 SPRR5A0A1B0GTR4 108 aa7.26□□□□□ -1.25
CMTM3-214ENST00000567572 LCE2BO14633 110 aa7.22□□□□□ -1.25
CMTM3-214ENST00000567572 MT1XP80297 61 aa7.18□□□□□ -1.26
CMTM3-214ENST00000567572 KRTAP10-5P60370 271 aa7.17□□□□□ -1.26
CMTM3-214ENST00000567572 LCE3AQ5TA76 89 aa7.16□□□□□ -1.26
CMTM3-214ENST00000567572 KRTAP8-1Q8IUC2 63 aa7.11□□□□□ -1.27
CMTM3-214ENST00000567572 PRO2289Q9P1D8 64 aa7.01□□□□□ -1.29
CMTM3-214ENST00000567572 KRTAP10-12P60413 245 aa6.99□□□□□ -1.29
CMTM3-214ENST00000567572 USH2AO75445 5202 aa6.95□□□□□ -1.3
CMTM3-214ENST00000567572 KRTAP10-7P60409 375 aaPredicted RBP6.9□□□□□ -1.3
CMTM3-214ENST00000567572 KRTAP12-3P60328 96 aa6.88□□□□□ -1.31
CMTM3-214ENST00000567572 SSPOA2VEC9 5147 aa6.77□□□□□ -1.33
CMTM3-214ENST00000567572 LCE2DQ5TA82 110 aaPredicted RBP6.72□□□□□ -1.33
CMTM3-214ENST00000567572 KRTAP19-6Q3LI70 58 aa6.7□□□□□ -1.34
CMTM3-214ENST00000567572 KRTAP9-2Q9BYQ4 174 aa6.66□□□□□ -1.34
CMTM3-214ENST00000567572 INE1O15225 51 aa6.62□□□□□ -1.35
CMTM3-214ENST00000567572 KRTAP4-8A0A0G2JLE6 195 aa6.57□□□□□ -1.36
CMTM3-214ENST00000567572 KRTAP4-8Q9BYQ9 185 aa6.57□□□□□ -1.36
CMTM3-214ENST00000567572 FSIP2Q5CZC0 6907 aa6.57□□□□□ -1.36
CMTM3-214ENST00000567572 KRTAP19-5Q3LI72 72 aa6.56□□□□□ -1.36
CMTM3-214ENST00000567572 KMT2DO14686 5537 aa6.51□□□□□ -1.37
CMTM3-214ENST00000567572 LCE3CQ5T5A8 94 aa6.48□□□□□ -1.37
CMTM3-214ENST00000567572 KRTAP19-4Q3LI73 84 aa6.46□□□□□ -1.38
CMTM3-214ENST00000567572 KRTAP19-7Q3SYF9 63 aa6.4□□□□□ -1.38
CMTM3-214ENST00000567572 KRTAP9-6A0A140TA67 174 aa6.39□□□□□ -1.39
CMTM3-214ENST00000567572 FCGBPQ9Y6R7 5405 aaPredicted RBP6.37□□□□□ -1.39
CMTM3-214ENST00000567572 CRCT1Q9UGL9 99 aa6.35□□□□□ -1.39
CMTM3-214ENST00000567572 MT1EP04732 61 aa6.27□□□□□ -1.41
CMTM3-214ENST00000567572 MT1LQ93083 61 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms