RNA–Protein interactions for RNA: ENST00000567053.1

AC055876.1-202, humanhuman

BASIC

Gene AC055876.1, Length 138 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.1-202ENST00000567053 HIVEP1P15822 2718 aa1.71□□□□□ -2.14
AC055876.1-202ENST00000567053 RPL37P61927 97 aaKnown RBP1.7□□□□□ -2.14
AC055876.1-202ENST00000567053 PDZD2O15018 2839 aa1.69□□□□□ -2.14
AC055876.1-202ENST00000567053 VWFP04275 2813 aa1.69□□□□□ -2.14
AC055876.1-202ENST00000567053 Q6ZSA8 131 aa1.69□□□□□ -2.14
AC055876.1-202ENST00000567053 FASNP49327 2511 aaKnown RBP1.68□□□□□ -2.14
AC055876.1-202ENST00000567053 HELZ2Q9BYK8 2649 aaKnown RBP1.68□□□□□ -2.14
AC055876.1-202ENST00000567053 H0YAA0 97 aa1.68□□□□□ -2.14
AC055876.1-202ENST00000567053 CRIPTQ9P021 101 aa1.68□□□□□ -2.14
AC055876.1-202ENST00000567053 TENM2Q9NT68 2774 aa1.68□□□□□ -2.14
AC055876.1-202ENST00000567053 ITPR2Q14571 2701 aa1.68□□□□□ -2.14
AC055876.1-202ENST00000567053 MAST4O15021 2626 aa1.67□□□□□ -2.14
AC055876.1-202ENST00000567053 CSMD2Q7Z408 3487 aa1.67□□□□□ -2.14
AC055876.1-202ENST00000567053 ANK3Q12955 4377 aaKnown RBP1.66□□□□□ -2.14
AC055876.1-202ENST00000567053 ALMS1Q8TCU4 4167 aa1.66□□□□□ -2.14
AC055876.1-202ENST00000567053 BAHCC1Q9P281 2608 aa1.65□□□□□ -2.15
AC055876.1-202ENST00000567053 HECTD1Q9ULT8 2610 aa1.65□□□□□ -2.15
AC055876.1-202ENST00000567053 FLNBO75369 2602 aaKnown RBP1.64□□□□□ -2.15
AC055876.1-202ENST00000567053 ZNF469Q96JG9 3925 aaPredicted RBP1.64□□□□□ -2.15
AC055876.1-202ENST00000567053 M0QZ58 72 aa1.64□□□□□ -2.15
AC055876.1-202ENST00000567053 TENM3Q9P273 2699 aa1.64□□□□□ -2.15
AC055876.1-202ENST00000567053 TENM4Q6N022 2769 aa1.63□□□□□ -2.15
AC055876.1-202ENST00000567053 TENM1Q9UKZ4 2725 aa1.63□□□□□ -2.15
AC055876.1-202ENST00000567053 NBEAL1Q6ZS30 2694 aa1.63□□□□□ -2.15
AC055876.1-202ENST00000567053 DNAH1Q9P2D7 4330 aa1.62□□□□□ -2.15
AC055876.1-202ENST00000567053 STAB2Q8WWQ8 2551 aa1.61□□□□□ -2.15
AC055876.1-202ENST00000567053 PKD1L1Q8TDX9 2849 aa1.61□□□□□ -2.15
AC055876.1-202ENST00000567053 NOTCH1P46531 2555 aa1.6□□□□□ -2.15
AC055876.1-202ENST00000567053 S4R3F8 94 aa1.6□□□□□ -2.15
AC055876.1-202ENST00000567053 OTOGQ6ZRI0 2925 aa1.6□□□□□ -2.15
AC055876.1-202ENST00000567053 DNAH3Q8TD57 4116 aa1.59□□□□□ -2.15
AC055876.1-202ENST00000567053 SRRM2Q9UQ35 2752 aaKnown RBP1.59□□□□□ -2.15
AC055876.1-202ENST00000567053 STAB1Q9NY15 2570 aa1.59□□□□□ -2.15
AC055876.1-202ENST00000567053 TRRAPQ9Y4A5 3859 aa1.59□□□□□ -2.16
AC055876.1-202ENST00000567053 COL6A5A8TX70 2615 aa1.58□□□□□ -2.16
AC055876.1-202ENST00000567053 CUBNO60494 3623 aa1.58□□□□□ -2.16
AC055876.1-202ENST00000567053 MGAM2Q2M2H8 2515 aa1.58□□□□□ -2.16
AC055876.1-202ENST00000567053 TGP01266 2768 aa1.57□□□□□ -2.16
AC055876.1-202ENST00000567053 DYNC2H1Q8NCM8 4307 aaKnown RBP1.56□□□□□ -2.16
AC055876.1-202ENST00000567053 HUWE1Q7Z6Z7 4374 aaKnown RBP1.56□□□□□ -2.16
AC055876.1-202ENST00000567053 ANK2Q01484 3957 aa1.55□□□□□ -2.16
AC055876.1-202ENST00000567053 C9orf92A6NGG3 77 aa1.55□□□□□ -2.16
AC055876.1-202ENST00000567053 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
AC055876.1-202ENST00000567053 A0A0D9SG42 100 aa1.53□□□□□ -2.16
AC055876.1-202ENST00000567053 PLAC4Q8WY50 150 aa1.53□□□□□ -2.16
AC055876.1-202ENST00000567053 VPS13DQ5THJ4 4388 aa1.52□□□□□ -2.17
AC055876.1-202ENST00000567053 MEGF8Q7Z7M0 2845 aa1.52□□□□□ -2.17
AC055876.1-202ENST00000567053 KRTAP12-1P59990 96 aa1.52□□□□□ -2.17
AC055876.1-202ENST00000567053 KRTAP13-4Q3LI77 160 aa1.52□□□□□ -2.17
AC055876.1-202ENST00000567053 DNAH10Q8IVF4 4471 aa1.52□□□□□ -2.17
AC055876.1-202ENST00000567053 LYSTQ99698 3801 aa1.52□□□□□ -2.17
AC055876.1-202ENST00000567053 FBN1P35555 2871 aaKnown RBP1.51□□□□□ -2.17
AC055876.1-202ENST00000567053 HECTD4Q9Y4D8 3996 aa1.51□□□□□ -2.17
AC055876.1-202ENST00000567053 DNAH8Q96JB1 4490 aa1.5□□□□□ -2.17
AC055876.1-202ENST00000567053 DNAH9Q9NYC9 4486 aa1.5□□□□□ -2.17
AC055876.1-202ENST00000567053 DMBT1Q9UGM3 2413 aaPredicted RBP1.5□□□□□ -2.17
AC055876.1-202ENST00000567053 DNAH17Q9UFH2 4485 aa1.5□□□□□ -2.17
AC055876.1-202ENST00000567053 KRTAP21-3Q3LHN1 58 aa1.5□□□□□ -2.17
AC055876.1-202ENST00000567053 DNAH6Q9C0G6 4158 aa1.5□□□□□ -2.17
AC055876.1-202ENST00000567053 CMYA5Q8N3K9 4069 aa1.5□□□□□ -2.17
AC055876.1-202ENST00000567053 FLG2Q5D862 2391 aaPredicted RBP1.5□□□□□ -2.17
AC055876.1-202ENST00000567053 COL7A1Q02388 2944 aa1.49□□□□□ -2.17
AC055876.1-202ENST00000567053 KRTAP12-3P60328 96 aa1.49□□□□□ -2.17
AC055876.1-202ENST00000567053 KRTAP6-3Q3LI67 103 aa1.49□□□□□ -2.17
AC055876.1-202ENST00000567053 PRKDCP78527 4128 aaKnown RBP1.48□□□□□ -2.17
AC055876.1-202ENST00000567053 DNAH7Q8WXX0 4024 aa1.48□□□□□ -2.17
AC055876.1-202ENST00000567053 PLECQ15149 4684 aaKnown RBP1.48□□□□□ -2.17
AC055876.1-202ENST00000567053 FRAS1Q86XX4 4008 aa1.47□□□□□ -2.17
AC055876.1-202ENST00000567053 INE1O15225 51 aa1.47□□□□□ -2.17
AC055876.1-202ENST00000567053 KRTAP12-4P60329 112 aa1.47□□□□□ -2.17
AC055876.1-202ENST00000567053 KRTAP10-4P60372 401 aaPredicted RBP1.47□□□□□ -2.17
AC055876.1-202ENST00000567053 C10orf95Q9H7T3 257 aa1.47□□□□□ -2.17
AC055876.1-202ENST00000567053 DNAH2Q9P225 4427 aa1.47□□□□□ -2.17
AC055876.1-202ENST00000567053 CSMD3Q7Z407 3707 aa1.45□□□□□ -2.18
AC055876.1-202ENST00000567053 FBN3Q75N90 2809 aa1.45□□□□□ -2.18
AC055876.1-202ENST00000567053 TNP1P09430 55 aa1.45□□□□□ -2.18
AC055876.1-202ENST00000567053 DNAH11Q96DT5 4516 aa1.45□□□□□ -2.18
AC055876.1-202ENST00000567053 SMR3BP02814 79 aaPredicted RBP1.44□□□□□ -2.18
AC055876.1-202ENST00000567053 VPS13BQ7Z7G8 4022 aa1.43□□□□□ -2.18
AC055876.1-202ENST00000567053 STARD9Q9P2P6 4700 aa1.43□□□□□ -2.18
AC055876.1-202ENST00000567053 SACSQ9NZJ4 4579 aa1.42□□□□□ -2.18
AC055876.1-202ENST00000567053 Q5VSD8 79 aa1.42□□□□□ -2.18
AC055876.1-202ENST00000567053 DNAH5Q8TE73 4624 aa1.42□□□□□ -2.18
AC055876.1-202ENST00000567053 KMT2AQ03164 3969 aa1.41□□□□□ -2.18
AC055876.1-202ENST00000567053 PKHD1L1Q86WI1 4243 aa1.41□□□□□ -2.18
AC055876.1-202ENST00000567053 LRP1BQ9NZR2 4599 aa1.4□□□□□ -2.19
AC055876.1-202ENST00000567053 PKHD1P08F94 4074 aa1.38□□□□□ -2.19
AC055876.1-202ENST00000567053 PKD1P98161 4303 aa1.37□□□□□ -2.19
AC055876.1-202ENST00000567053 APOBP04114 4563 aaKnown RBP1.36□□□□□ -2.19
AC055876.1-202ENST00000567053 FAT2Q9NYQ8 4349 aa1.35□□□□□ -2.19
AC055876.1-202ENST00000567053 MT1HL1P0DM35 61 aa1.35□□□□□ -2.19
AC055876.1-202ENST00000567053 CRCT1Q9UGL9 99 aa1.35□□□□□ -2.19
AC055876.1-202ENST00000567053 TNXBP22105 4242 aa1.34□□□□□ -2.2
AC055876.1-202ENST00000567053 LRP1Q07954 4544 aaKnown RBP1.32□□□□□ -2.2
AC055876.1-202ENST00000567053 FAT3Q8TDW7 4589 aa1.32□□□□□ -2.2
AC055876.1-202ENST00000567053 DYNC1H1Q14204 4646 aaKnown RBP1.31□□□□□ -2.2
AC055876.1-202ENST00000567053 FAT1Q14517 4588 aa1.3□□□□□ -2.2
AC055876.1-202ENST00000567053 KRTAP4-1Q9BYQ7 146 aa1.3□□□□□ -2.2
AC055876.1-202ENST00000567053 HSPG2P98160 4391 aa1.29□□□□□ -2.2
AC055876.1-202ENST00000567053 SPRR2GQ9BYE4 73 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms