RNA–Protein interactions for RNA: ENST00000567053.1

AC055876.1-202, humanhuman

BASIC

Gene AC055876.1, Length 138 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.1-202ENST00000567053 AEBP2Q6ZN18 517 aaPredicted RBP20.32■□□□□ 0.84
AC055876.1-202ENST00000567053 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
AC055876.1-202ENST00000567053 PHF23Q9BUL5 403 aaPredicted RBP17.22■□□□□ 0.35
AC055876.1-202ENST00000567053 SENP3Q9H4L4 574 aaPredicted RBP17.2■□□□□ 0.34
AC055876.1-202ENST00000567053 FOXD1Q16676 465 aa16.06■□□□□ 0.16
AC055876.1-202ENST00000567053 PLPPR3Q6T4P5 718 aa15.75■□□□□ 0.11
AC055876.1-202ENST00000567053 PPP6R1Q9UPN7 881 aa15.3■□□□□ 0.04
AC055876.1-202ENST00000567053 ADRA2BP18089 450 aa15.28■□□□□ 0.04
AC055876.1-202ENST00000567053 PIAS4Q8N2W9 510 aaPredicted RBP15.08■□□□□ 0
AC055876.1-202ENST00000567053 MSH5O43196 834 aa14.82□□□□□ -0.04
AC055876.1-202ENST00000567053 POTEDQ86YR6 584 aa14□□□□□ -0.17
AC055876.1-202ENST00000567053 MAPK8IP2Q13387 824 aaPredicted RBP13.96□□□□□ -0.17
AC055876.1-202ENST00000567053 PPP4R3CPQ6ZMV5 832 aa13.89□□□□□ -0.19
AC055876.1-202ENST00000567053 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
AC055876.1-202ENST00000567053 DMRT2Q9Y5R5 561 aa13.7□□□□□ -0.22
AC055876.1-202ENST00000567053 CNKSR2Q8WXI2 1034 aa13.51□□□□□ -0.25
AC055876.1-202ENST00000567053 NCBP3Q53F19 620 aaKnown RBP13.4□□□□□ -0.26
AC055876.1-202ENST00000567053 KCNA4P22459 653 aa13.33□□□□□ -0.28
AC055876.1-202ENST00000567053 HOXD11P31277 338 aaPredicted RBP13.3□□□□□ -0.28
AC055876.1-202ENST00000567053 RNF216Q9NWF9 866 aaPredicted RBP13.29□□□□□ -0.28
AC055876.1-202ENST00000567053 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
AC055876.1-202ENST00000567053 DCAF8L1A6NGE4 600 aa13.22□□□□□ -0.29
AC055876.1-202ENST00000567053 DNAJC5BQ9UF47 199 aa12.76□□□□□ -0.37
AC055876.1-202ENST00000567053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.74□□□□□ -0.37
AC055876.1-202ENST00000567053 RNF39Q9H2S5 420 aa12.71□□□□□ -0.37
AC055876.1-202ENST00000567053 SLC4A1APQ9BWU0 796 aaKnown RBP12.63□□□□□ -0.39
AC055876.1-202ENST00000567053 SLC4A2P04920 1241 aa12.6□□□□□ -0.39
AC055876.1-202ENST00000567053 CACNB1Q02641 598 aaPredicted RBP12.59□□□□□ -0.39
AC055876.1-202ENST00000567053 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
AC055876.1-202ENST00000567053 U3KPZ7 1027 aaPredicted RBP12.51□□□□□ -0.41
AC055876.1-202ENST00000567053 ZBTB22O15209 634 aa12.29□□□□□ -0.44
AC055876.1-202ENST00000567053 FOXD4L1Q9NU39 408 aa12.28□□□□□ -0.44
AC055876.1-202ENST00000567053 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
AC055876.1-202ENST00000567053 MYCNP04198 464 aaPredicted RBP12.22□□□□□ -0.45
AC055876.1-202ENST00000567053 CAPN15O75808 1086 aa12.21□□□□□ -0.45
AC055876.1-202ENST00000567053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.16□□□□□ -0.46
AC055876.1-202ENST00000567053 HNRNPUL2Q1KMD3 747 aaKnown RBP12.16□□□□□ -0.46
AC055876.1-202ENST00000567053 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
AC055876.1-202ENST00000567053 TRHP20396 242 aaPredicted RBP12.11□□□□□ -0.47
AC055876.1-202ENST00000567053 APLP2Q06481 763 aa12.08□□□□□ -0.48
AC055876.1-202ENST00000567053 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
AC055876.1-202ENST00000567053 DSG3P32926 999 aa12.03□□□□□ -0.48
AC055876.1-202ENST00000567053 ABCB7O75027 752 aa12.01□□□□□ -0.49
AC055876.1-202ENST00000567053 ATF5Q9Y2D1 282 aaPredicted RBP12.01□□□□□ -0.49
AC055876.1-202ENST00000567053 ZNF219Q9P2Y4 722 aaPredicted RBP12□□□□□ -0.49
AC055876.1-202ENST00000567053 CSRNP3Q8WYN3 585 aa11.98□□□□□ -0.49
AC055876.1-202ENST00000567053 POLA2Q14181 598 aa11.84□□□□□ -0.51
AC055876.1-202ENST00000567053 ATXN8OSP0DMR3 200 aa11.81□□□□□ -0.52
AC055876.1-202ENST00000567053 ZBTB12Q9Y330 459 aaPredicted RBP11.52□□□□□ -0.57
AC055876.1-202ENST00000567053 OSCARQ8IYS5 282 aa11.47□□□□□ -0.57
AC055876.1-202ENST00000567053 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
AC055876.1-202ENST00000567053 FBLN2P98095 1184 aa11.43□□□□□ -0.58
AC055876.1-202ENST00000567053 RBM42Q9BTD8 480 aaKnown RBP11.41□□□□□ -0.58
AC055876.1-202ENST00000567053 SPDYE2BA6NHP3 402 aa11.23□□□□□ -0.61
AC055876.1-202ENST00000567053 SPDYE6P0CI01 402 aa11.23□□□□□ -0.61
AC055876.1-202ENST00000567053 SPDYE2Q495Y8 402 aa11.23□□□□□ -0.61
AC055876.1-202ENST00000567053 AKT1S1Q96B36 256 aa11.23□□□□□ -0.61
AC055876.1-202ENST00000567053 ZNF692Q9BU19 519 aaPredicted RBP11.19□□□□□ -0.62
AC055876.1-202ENST00000567053 REM2Q8IYK8 340 aaPredicted RBP11.18□□□□□ -0.62
AC055876.1-202ENST00000567053 SSUH2Q9Y2M2 353 aa11.12□□□□□ -0.63
AC055876.1-202ENST00000567053 CHRDL2Q6WN34 429 aa11.09□□□□□ -0.63
AC055876.1-202ENST00000567053 PITPNM1O00562 1244 aa11.07□□□□□ -0.64
AC055876.1-202ENST00000567053 SPDYE4A6NLX3 237 aa11.05□□□□□ -0.64
AC055876.1-202ENST00000567053 PABPN1Q86U42 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
AC055876.1-202ENST00000567053 POTEHQ6S545 545 aa11.02□□□□□ -0.65
AC055876.1-202ENST00000567053 CLEC11AQ9Y240 323 aa11□□□□□ -0.65
AC055876.1-202ENST00000567053 SPDYE1Q8NFV5 336 aaPredicted RBP10.96□□□□□ -0.65
AC055876.1-202ENST00000567053 PIP4P2Q8N4L2 257 aa10.92□□□□□ -0.66
AC055876.1-202ENST00000567053 FXR2P51116 673 aaKnown RBP eCLIP10.87□□□□□ -0.67
AC055876.1-202ENST00000567053 FKBP8Q14318 412 aa10.86□□□□□ -0.67
AC055876.1-202ENST00000567053 PRR29P0C7W0 189 aa10.82□□□□□ -0.68
AC055876.1-202ENST00000567053 PRKAR2AP13861 404 aaKnown RBP10.79□□□□□ -0.68
AC055876.1-202ENST00000567053 CHADLQ6NUI6 762 aa10.78□□□□□ -0.68
AC055876.1-202ENST00000567053 PROM2Q8N271 834 aa10.77□□□□□ -0.69
AC055876.1-202ENST00000567053 STAG3Q9UJ98 1225 aa10.73□□□□□ -0.69
AC055876.1-202ENST00000567053 HAX1O00165 279 aa10.64□□□□□ -0.71
AC055876.1-202ENST00000567053 CREBZFQ9NS37 354 aa10.64□□□□□ -0.71
AC055876.1-202ENST00000567053 FARP1Q9Y4F1 1045 aaPredicted RBP10.59□□□□□ -0.71
AC055876.1-202ENST00000567053 EVX2Q03828 476 aa10.57□□□□□ -0.72
AC055876.1-202ENST00000567053 MIER1Q8N108 512 aa10.52□□□□□ -0.73
AC055876.1-202ENST00000567053 C19orf67A6NJJ6 358 aa10.51□□□□□ -0.73
AC055876.1-202ENST00000567053 MNX1P50219 401 aaPredicted RBP10.49□□□□□ -0.73
AC055876.1-202ENST00000567053 PLCD3Q8N3E9 789 aa10.48□□□□□ -0.73
AC055876.1-202ENST00000567053 SP7Q8TDD2 431 aaPredicted RBP10.47□□□□□ -0.73
AC055876.1-202ENST00000567053 CD44P16070 742 aaKnown RBP10.46□□□□□ -0.73
AC055876.1-202ENST00000567053 FBXO3Q9UK99 471 aa10.45□□□□□ -0.74
AC055876.1-202ENST00000567053 PLEKHG5O94827 1062 aa10.41□□□□□ -0.74
AC055876.1-202ENST00000567053 NPM1P06748 294 aaKnown RBP eCLIP10.4□□□□□ -0.74
AC055876.1-202ENST00000567053 VASPP50552 380 aaPredicted RBP10.37□□□□□ -0.75
AC055876.1-202ENST00000567053 ZRANB1Q9UGI0 708 aa10.37□□□□□ -0.75
AC055876.1-202ENST00000567053 TSPYL2Q9H2G4 693 aaPredicted RBP10.32□□□□□ -0.76
AC055876.1-202ENST00000567053 GABBR2O75899 941 aa10.3□□□□□ -0.76
AC055876.1-202ENST00000567053 PAK3O75914 559 aaPredicted RBP10.3□□□□□ -0.76
AC055876.1-202ENST00000567053 RASEFQ8IZ41 740 aa10.3□□□□□ -0.76
AC055876.1-202ENST00000567053 PHF12Q96QT6 1004 aa10.29□□□□□ -0.76
AC055876.1-202ENST00000567053 KLHL34Q8N239 644 aa10.28□□□□□ -0.76
AC055876.1-202ENST00000567053 ZBTB47Q9UFB7 747 aaPredicted RBP10.28□□□□□ -0.76
AC055876.1-202ENST00000567053 ZNF579Q8NAF0 562 aaKnown RBP10.27□□□□□ -0.77
AC055876.1-202ENST00000567053 NUBP1P53384 320 aa10.25□□□□□ -0.77
AC055876.1-202ENST00000567053 IFNLR1Q8IU57 520 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms