RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-231ENST00000564288 KRTAP10-12P60413 245 aa1.79□□□□□ -2.12
MACF1-231ENST00000564288 VPS13CQ709C8 3753 aa1.79□□□□□ -2.12
MACF1-231ENST00000564288 DNAH1Q9P2D7 4330 aa1.79□□□□□ -2.12
MACF1-231ENST00000564288 HECTD4Q9Y4D8 3996 aa1.78□□□□□ -2.12
MACF1-231ENST00000564288 FRAS1Q86XX4 4008 aa1.78□□□□□ -2.12
MACF1-231ENST00000564288 DNAH7Q8WXX0 4024 aa1.78□□□□□ -2.12
MACF1-231ENST00000564288 KRTAP8-1Q8IUC2 63 aa1.77□□□□□ -2.13
MACF1-231ENST00000564288 CSMD1Q96PZ7 3565 aa1.76□□□□□ -2.13
MACF1-231ENST00000564288 DNAH2Q9P225 4427 aa1.76□□□□□ -2.13
MACF1-231ENST00000564288 MT1HL1P0DM35 61 aa1.76□□□□□ -2.13
MACF1-231ENST00000564288 DNAH3Q8TD57 4116 aa1.75□□□□□ -2.13
MACF1-231ENST00000564288 FLGP20930 4061 aaPredicted RBP1.74□□□□□ -2.13
MACF1-231ENST00000564288 HUWE1Q7Z6Z7 4374 aaKnown RBP1.73□□□□□ -2.13
MACF1-231ENST00000564288 VPS13BQ7Z7G8 4022 aa1.73□□□□□ -2.13
MACF1-231ENST00000564288 LORP23490 312 aaPredicted RBP1.71□□□□□ -2.14
MACF1-231ENST00000564288 LCE3AQ5TA76 89 aa1.7□□□□□ -2.14
MACF1-231ENST00000564288 DNAH6Q9C0G6 4158 aa1.7□□□□□ -2.14
MACF1-231ENST00000564288 ANK3Q12955 4377 aaKnown RBP1.69□□□□□ -2.14
MACF1-231ENST00000564288 LYSTQ99698 3801 aa1.68□□□□□ -2.14
MACF1-231ENST00000564288 VPS13DQ5THJ4 4388 aa1.68□□□□□ -2.14
MACF1-231ENST00000564288 LCE3CQ5T5A8 94 aa1.67□□□□□ -2.14
MACF1-231ENST00000564288 MT3P25713 68 aa1.66□□□□□ -2.14
MACF1-231ENST00000564288 DNAH8Q96JB1 4490 aa1.66□□□□□ -2.14
MACF1-231ENST00000564288 RYR1P21817 5038 aa1.65□□□□□ -2.14
MACF1-231ENST00000564288 DNAH5Q8TE73 4624 aa1.65□□□□□ -2.15
MACF1-231ENST00000564288 KRTAP19-8Q3LI54 63 aa1.64□□□□□ -2.15
MACF1-231ENST00000564288 DNAH17Q9UFH2 4485 aa1.63□□□□□ -2.15
MACF1-231ENST00000564288 CSMD3Q7Z407 3707 aa1.63□□□□□ -2.15
MACF1-231ENST00000564288 FAT1Q14517 4588 aa1.61□□□□□ -2.15
MACF1-231ENST00000564288 PRKDCP78527 4128 aaKnown RBP1.6□□□□□ -2.15
MACF1-231ENST00000564288 KRTAP12-4P60329 112 aa1.6□□□□□ -2.15
MACF1-231ENST00000564288 DYNC2H1Q8NCM8 4307 aaKnown RBP1.6□□□□□ -2.15
MACF1-231ENST00000564288 LRP1Q07954 4544 aaKnown RBP1.6□□□□□ -2.15
MACF1-231ENST00000564288 PLECQ15149 4684 aaKnown RBP1.6□□□□□ -2.15
MACF1-231ENST00000564288 APOBP04114 4563 aaKnown RBP1.59□□□□□ -2.15
MACF1-231ENST00000564288 DYNC1H1Q14204 4646 aaKnown RBP1.59□□□□□ -2.16
MACF1-231ENST00000564288 KRTAP10-5P60370 271 aa1.58□□□□□ -2.16
MACF1-231ENST00000564288 LRP1BQ9NZR2 4599 aa1.58□□□□□ -2.16
MACF1-231ENST00000564288 DNAH9Q9NYC9 4486 aa1.58□□□□□ -2.16
MACF1-231ENST00000564288 KMT2AQ03164 3969 aa1.57□□□□□ -2.16
MACF1-231ENST00000564288 PKD1P98161 4303 aa1.55□□□□□ -2.16
MACF1-231ENST00000564288 SACSQ9NZJ4 4579 aa1.55□□□□□ -2.16
MACF1-231ENST00000564288 PKHD1P08F94 4074 aa1.54□□□□□ -2.16
MACF1-231ENST00000564288 FAT2Q9NYQ8 4349 aa1.53□□□□□ -2.17
MACF1-231ENST00000564288 MYCBP2O75592 4640 aa1.52□□□□□ -2.17
MACF1-231ENST00000564288 KRTAP19-5Q3LI72 72 aa1.52□□□□□ -2.17
MACF1-231ENST00000564288 HSPG2P98160 4391 aa1.51□□□□□ -2.17
MACF1-231ENST00000564288 KRTAP19-1Q8IUB9 90 aa1.51□□□□□ -2.17
MACF1-231ENST00000564288 STARD9Q9P2P6 4700 aa1.5□□□□□ -2.17
MACF1-231ENST00000564288 MUC17Q685J3 4493 aa1.49□□□□□ -2.17
MACF1-231ENST00000564288 KRTAP2-3P0C7H8 128 aa1.49□□□□□ -2.17
MACF1-231ENST00000564288 KRTAP2-4Q9BYR9 128 aa1.49□□□□□ -2.17
MACF1-231ENST00000564288 KRTAP2-1Q9BYU5 128 aa1.49□□□□□ -2.17
MACF1-231ENST00000564288 MT2AP02795 61 aa1.48□□□□□ -2.17
MACF1-231ENST00000564288 KRTAP4-1Q9BYQ7 146 aa1.48□□□□□ -2.17
MACF1-231ENST00000564288 MT1HP80294 61 aa1.47□□□□□ -2.17
MACF1-231ENST00000564288 MT1LQ93083 61 aa1.46□□□□□ -2.18
MACF1-231ENST00000564288 MT1GP13640 62 aa1.46□□□□□ -2.18
MACF1-231ENST00000564288 MT1FP04733 61 aa1.46□□□□□ -2.18
MACF1-231ENST00000564288 FAT3Q8TDW7 4589 aa1.46□□□□□ -2.18
MACF1-231ENST00000564288 MT1EP04732 61 aa1.45□□□□□ -2.18
MACF1-231ENST00000564288 LCE3EQ5T5B0 92 aa1.45□□□□□ -2.18
MACF1-231ENST00000564288 CRCT1Q9UGL9 99 aa1.44□□□□□ -2.18
MACF1-231ENST00000564288 MT1XP80297 61 aa1.44□□□□□ -2.18
MACF1-231ENST00000564288 RYR2Q92736 4967 aa1.44□□□□□ -2.18
MACF1-231ENST00000564288 PKHD1L1Q86WI1 4243 aa1.43□□□□□ -2.18
MACF1-231ENST00000564288 LCE3DQ9BYE3 92 aa1.43□□□□□ -2.18
MACF1-231ENST00000564288 MT1AP04731 61 aa1.42□□□□□ -2.18
MACF1-231ENST00000564288 KRTAP10-7P60409 375 aaPredicted RBP1.42□□□□□ -2.18
MACF1-231ENST00000564288 SPRR2AP35326 72 aa1.4□□□□□ -2.18
MACF1-231ENST00000564288 TNXBP22105 4242 aa1.4□□□□□ -2.19
MACF1-231ENST00000564288 KRTAP9-8Q9BYQ0 159 aa1.39□□□□□ -2.19
MACF1-231ENST00000564288 RYR3Q15413 4870 aa1.38□□□□□ -2.19
MACF1-231ENST00000564288 DNHD1Q96M86 4753 aa1.37□□□□□ -2.19
MACF1-231ENST00000564288 KRTAP19-2Q3LHN2 52 aa1.37□□□□□ -2.19
MACF1-231ENST00000564288 MT1BP07438 61 aa1.37□□□□□ -2.19
MACF1-231ENST00000564288 LRP2P98164 4655 aa1.36□□□□□ -2.19
MACF1-231ENST00000564288 SPRR2BP35325 72 aa1.36□□□□□ -2.19
MACF1-231ENST00000564288 KRTAP9-3Q9BYQ3 159 aa1.36□□□□□ -2.19
MACF1-231ENST00000564288 KRTAP4-5Q9BYR2 181 aa1.36□□□□□ -2.19
MACF1-231ENST00000564288 KIAA1109Q2LD37 5005 aa1.35□□□□□ -2.19
MACF1-231ENST00000564288 KRTAP19-3Q7Z4W3 81 aa1.35□□□□□ -2.19
MACF1-231ENST00000564288 MT1MQ8N339 61 aa1.34□□□□□ -2.19
MACF1-231ENST00000564288 HERC2O95714 4834 aa1.34□□□□□ -2.2
MACF1-231ENST00000564288 PCLOQ9Y6V0 5065 aa1.34□□□□□ -2.2
MACF1-231ENST00000564288 LCE2CQ5TA81 110 aa1.34□□□□□ -2.2
MACF1-231ENST00000564288 SPRR2FQ96RM1 72 aa1.32□□□□□ -2.2
MACF1-231ENST00000564288 BIRC6Q9NR09 4857 aa1.31□□□□□ -2.2
MACF1-231ENST00000564288 KRTAP19-6Q3LI70 58 aa1.31□□□□□ -2.2
MACF1-231ENST00000564288 LCE1AQ5T7P2 110 aa1.31□□□□□ -2.2
MACF1-231ENST00000564288 HYDINQ4G0P3 5121 aa1.29□□□□□ -2.2
MACF1-231ENST00000564288 HERC1Q15751 4861 aa1.29□□□□□ -2.2
MACF1-231ENST00000564288 PRM1P04553 51 aa1.28□□□□□ -2.2
MACF1-231ENST00000564288 KRTAP4-8A0A0G2JLE6 195 aa1.26□□□□□ -2.21
MACF1-231ENST00000564288 KRTAP4-8Q9BYQ9 185 aa1.26□□□□□ -2.21
MACF1-231ENST00000564288 KMT2CQ8NEZ4 4911 aaKnown RBP1.26□□□□□ -2.21
MACF1-231ENST00000564288 SPRR2DP22532 72 aa1.25□□□□□ -2.21
MACF1-231ENST00000564288 LCE2BO14633 110 aa1.25□□□□□ -2.21
MACF1-231ENST00000564288 LCE3BQ5TA77 95 aa1.24□□□□□ -2.21
MACF1-231ENST00000564288 EPPK1P58107 5090 aaKnown RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 223.6 ms