RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 RYR3Q15413 4870 aa-0.5□□□□□ -2.49
HMGB1P33-201ENST00000563485 IGIPA6NJ69 53 aa-0.5□□□□□ -2.49
HMGB1P33-201ENST00000563485 CCDC180Q9P1Z9 1646 aa-0.5□□□□□ -2.49
HMGB1P33-201ENST00000563485 DNAH17Q9UFH2 4485 aa-0.51□□□□□ -2.49
HMGB1P33-201ENST00000563485 LRBAP50851 2863 aa-0.51□□□□□ -2.49
HMGB1P33-201ENST00000563485 NMES1Q9C002 83 aa-0.51□□□□□ -2.49
HMGB1P33-201ENST00000563485 TMEM167BQ9NRX6 74 aa-0.51□□□□□ -2.49
HMGB1P33-201ENST00000563485 MAST1Q9Y2H9 1570 aa-0.51□□□□□ -2.49
HMGB1P33-201ENST00000563485 LAMA2P24043 3122 aaKnown RBP-0.51□□□□□ -2.49
HMGB1P33-201ENST00000563485 ABCA10Q8WWZ4 1543 aa-0.52□□□□□ -2.49
HMGB1P33-201ENST00000563485 A8MTW9 85 aa-0.52□□□□□ -2.49
HMGB1P33-201ENST00000563485 SMR3BP02814 79 aaPredicted RBP-0.52□□□□□ -2.49
HMGB1P33-201ENST00000563485 CLPSL2Q6UWE3 100 aa-0.52□□□□□ -2.49
HMGB1P33-201ENST00000563485 DNAH10Q8IVF4 4471 aa-0.53□□□□□ -2.49
HMGB1P33-201ENST00000563485 M0QZ58 72 aa-0.53□□□□□ -2.49
HMGB1P33-201ENST00000563485 M0R1W7 72 aa-0.53□□□□□ -2.49
HMGB1P33-201ENST00000563485 SFTA3P0C7M3 94 aa-0.53□□□□□ -2.49
HMGB1P33-201ENST00000563485 DEFB1P60022 68 aa-0.53□□□□□ -2.49
HMGB1P33-201ENST00000563485 SPTAN1Q13813 2472 aaKnown RBP-0.53□□□□□ -2.49
HMGB1P33-201ENST00000563485 ALS2Q96Q42 1657 aa-0.53□□□□□ -2.49
HMGB1P33-201ENST00000563485 ADGRG4Q8IZF6 3080 aa-0.53□□□□□ -2.5
HMGB1P33-201ENST00000563485 CHD7Q9P2D1 2997 aa-0.54□□□□□ -2.5
HMGB1P33-201ENST00000563485 DOPEY1Q5JWR5 2465 aa-0.54□□□□□ -2.5
HMGB1P33-201ENST00000563485 EEA1Q15075 1411 aa-0.55□□□□□ -2.5
HMGB1P33-201ENST00000563485 COL6A5A8TX70 2615 aa-0.55□□□□□ -2.5
HMGB1P33-201ENST00000563485 SRCAPQ6ZRS2 3230 aa-0.55□□□□□ -2.5
HMGB1P33-201ENST00000563485 M0QY20 66 aa-0.55□□□□□ -2.5
HMGB1P33-201ENST00000563485 TRRAPQ9Y4A5 3859 aa-0.55□□□□□ -2.5
HMGB1P33-201ENST00000563485 H0YGX0 51 aa-0.56□□□□□ -2.5
HMGB1P33-201ENST00000563485 LINC00308Q8TCZ7 52 aa-0.56□□□□□ -2.5
HMGB1P33-201ENST00000563485 NIPBLQ6KC79 2804 aaeCLIP-0.56□□□□□ -2.5
HMGB1P33-201ENST00000563485 MYO9AB2RTY4 2548 aa-0.57□□□□□ -2.5
HMGB1P33-201ENST00000563485 MGAQ8IWI9 3026 aa-0.57□□□□□ -2.5
HMGB1P33-201ENST00000563485 SMIM31A0A1B0GVY4 71 aa-0.57□□□□□ -2.5
HMGB1P33-201ENST00000563485 CSMD1Q96PZ7 3565 aa-0.57□□□□□ -2.5
HMGB1P33-201ENST00000563485 KIF21BO75037 1637 aa-0.57□□□□□ -2.5
HMGB1P33-201ENST00000563485 MT1EP04732 61 aa-0.58□□□□□ -2.5
HMGB1P33-201ENST00000563485 S100ZQ8WXG8 99 aa-0.58□□□□□ -2.5
HMGB1P33-201ENST00000563485 RYR2Q92736 4967 aa-0.59□□□□□ -2.5
HMGB1P33-201ENST00000563485 MT1XP80297 61 aa-0.59□□□□□ -2.5
HMGB1P33-201ENST00000563485 SMIM5Q71RC9 77 aa-0.59□□□□□ -2.5
HMGB1P33-201ENST00000563485 ABRACLQ9P1F3 81 aa-0.59□□□□□ -2.5
HMGB1P33-201ENST00000563485 UGGT1Q9NYU2 1555 aa-0.59□□□□□ -2.5
HMGB1P33-201ENST00000563485 KIAA1109Q2LD37 5005 aa-0.59□□□□□ -2.5
HMGB1P33-201ENST00000563485 CPS1P31327 1500 aa-0.59□□□□□ -2.5
HMGB1P33-201ENST00000563485 FAM208AQ9UK61 1670 aaKnown RBP-0.59□□□□□ -2.5
HMGB1P33-201ENST00000563485 A0A1B0GUL6 1792 aa-0.6□□□□□ -2.5
HMGB1P33-201ENST00000563485 SMIM27A0A1W2PRY6 76 aa-0.6□□□□□ -2.51
HMGB1P33-201ENST00000563485 PREX2Q70Z35 1606 aa-0.6□□□□□ -2.51
HMGB1P33-201ENST00000563485 DNAH5Q8TE73 4624 aa-0.61□□□□□ -2.51
HMGB1P33-201ENST00000563485 AGLP35573 1532 aa-0.61□□□□□ -2.51
HMGB1P33-201ENST00000563485 ADCY10Q96PN6 1610 aa-0.61□□□□□ -2.51
HMGB1P33-201ENST00000563485 CFAP46Q8IYW2 2715 aa-0.61□□□□□ -2.51
HMGB1P33-201ENST00000563485 PRXQ9BXM0 1461 aa-0.61□□□□□ -2.51
HMGB1P33-201ENST00000563485 ERICH3Q5RHP9 1530 aa-0.62□□□□□ -2.51
HMGB1P33-201ENST00000563485 MT1LQ93083 61 aa-0.62□□□□□ -2.51
HMGB1P33-201ENST00000563485 KAAG1Q9UBP8 84 aa-0.62□□□□□ -2.51
HMGB1P33-201ENST00000563485 CEP295Q9C0D2 2601 aa-0.62□□□□□ -2.51
HMGB1P33-201ENST00000563485 LMO7Q8WWI1 1683 aa-0.62□□□□□ -2.51
HMGB1P33-201ENST00000563485 EFCAB6Q5THR3 1501 aa-0.63□□□□□ -2.51
HMGB1P33-201ENST00000563485 ABCA5Q8WWZ7 1642 aa-0.63□□□□□ -2.51
HMGB1P33-201ENST00000563485 EYSQ5T1H1 3165 aa-0.63□□□□□ -2.51
HMGB1P33-201ENST00000563485 DEFB131AP59861 70 aa-0.64□□□□□ -2.51
HMGB1P33-201ENST00000563485 LINC01546A6NGU7 62 aa-0.65□□□□□ -2.51
HMGB1P33-201ENST00000563485 SYCP2Q9BX26 1530 aa-0.65□□□□□ -2.51
HMGB1P33-201ENST00000563485 PLNP26678 52 aa-0.66□□□□□ -2.52
HMGB1P33-201ENST00000563485 ITPR2Q14571 2701 aa-0.66□□□□□ -2.52
HMGB1P33-201ENST00000563485 WFDC10BQ8IUB3 73 aa-0.67□□□□□ -2.52
HMGB1P33-201ENST00000563485 SMG1Q96Q15 3661 aaKnown RBP-0.67□□□□□ -2.52
HMGB1P33-201ENST00000563485 ZFHX4Q86UP3 3567 aa-0.67□□□□□ -2.52
HMGB1P33-201ENST00000563485 CSMD2Q7Z408 3487 aa-0.68□□□□□ -2.52
HMGB1P33-201ENST00000563485 DMXL2Q8TDJ6 3036 aa-0.68□□□□□ -2.52
HMGB1P33-201ENST00000563485 ABCC8Q09428 1581 aa-0.68□□□□□ -2.52
HMGB1P33-201ENST00000563485 NRXN3Q9Y4C0 1643 aa-0.68□□□□□ -2.52
HMGB1P33-201ENST00000563485 SPART-AS1P0CW21 52 aa-0.69□□□□□ -2.52
HMGB1P33-201ENST00000563485 CMC2Q9NRP2 79 aa-0.69□□□□□ -2.52
HMGB1P33-201ENST00000563485 FANCD2Q9BXW9 1451 aa-0.69□□□□□ -2.52
HMGB1P33-201ENST00000563485 MT1HL1P0DM35 61 aa-0.7□□□□□ -2.52
HMGB1P33-201ENST00000563485 TRPM2O94759 1503 aa-0.7□□□□□ -2.52
HMGB1P33-201ENST00000563485 CRYBG3Q68DQ2 2970 aa-0.7□□□□□ -2.52
HMGB1P33-201ENST00000563485 CFAP54Q96N23 3096 aa-0.7□□□□□ -2.52
HMGB1P33-201ENST00000563485 SMIM2Q9BVW6 85 aa-0.72□□□□□ -2.52
HMGB1P33-201ENST00000563485 MROH2AA6NES4 1674 aa-0.72□□□□□ -2.53
HMGB1P33-201ENST00000563485 PRUNE2Q8WUY3 3088 aa-0.73□□□□□ -2.53
HMGB1P33-201ENST00000563485 VPS13CQ709C8 3753 aa-0.74□□□□□ -2.53
HMGB1P33-201ENST00000563485 IQGAP1P46940 1657 aa-0.75□□□□□ -2.53
HMGB1P33-201ENST00000563485 POLR2KP53803 58 aaKnown RBP-0.75□□□□□ -2.53
HMGB1P33-201ENST00000563485 TLN1Q9Y490 2541 aaKnown RBP-0.75□□□□□ -2.53
HMGB1P33-201ENST00000563485 ABCA13Q86UQ4 5058 aa-0.76□□□□□ -2.53
HMGB1P33-201ENST00000563485 TFF3Q07654 80 aa-0.76□□□□□ -2.53
HMGB1P33-201ENST00000563485 MT1MQ8N339 61 aa-0.76□□□□□ -2.53
HMGB1P33-201ENST00000563485 DDX60Q8IY21 1712 aaKnown RBP-0.76□□□□□ -2.53
HMGB1P33-201ENST00000563485 FRYLO94915 3013 aa-0.78□□□□□ -2.53
HMGB1P33-201ENST00000563485 CLTCL1P53675 1640 aa-0.78□□□□□ -2.53
HMGB1P33-201ENST00000563485 NFAT5O94916 1531 aa-0.78□□□□□ -2.53
HMGB1P33-201ENST00000563485 MT2AP02795 61 aa-0.78□□□□□ -2.53
HMGB1P33-201ENST00000563485 ATMQ13315 3056 aa-0.79□□□□□ -2.54
HMGB1P33-201ENST00000563485 LEAP2Q969E1 77 aa-0.79□□□□□ -2.54
HMGB1P33-201ENST00000563485 FREM2Q5SZK8 3169 aa-0.8□□□□□ -2.54
HMGB1P33-201ENST00000563485 MT1GP13640 62 aa-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms