RNA–Protein interactions for RNA: ENST00000563290.5

SCAPER-207, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAPER, Length 5,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-207ENST00000563290 MEGF8Q7Z7M0 2845 aa3.15□□□□□ -1.9
SCAPER-207ENST00000563290 M0QZ58 72 aa3.15□□□□□ -1.9
SCAPER-207ENST00000563290 DNAH2Q9P225 4427 aa3.15□□□□□ -1.91
SCAPER-207ENST00000563290 DNAH11Q96DT5 4516 aa3.12□□□□□ -1.91
SCAPER-207ENST00000563290 KRTAP3-1Q9BYR8 98 aa3.12□□□□□ -1.91
SCAPER-207ENST00000563290 KRTAP15-1Q3LI76 137 aa3.11□□□□□ -1.91
SCAPER-207ENST00000563290 STARD9Q9P2P6 4700 aa3.08□□□□□ -1.92
SCAPER-207ENST00000563290 DNAH5Q8TE73 4624 aa3.08□□□□□ -1.92
SCAPER-207ENST00000563290 LCE2DQ5TA82 110 aaPredicted RBP3.03□□□□□ -1.92
SCAPER-207ENST00000563290 KRTAP13-4Q3LI77 160 aa3.02□□□□□ -1.93
SCAPER-207ENST00000563290 KRTAP10-4P60372 401 aaPredicted RBP3.02□□□□□ -1.93
SCAPER-207ENST00000563290 KRTAP3-3Q9BYR6 98 aa3.02□□□□□ -1.93
SCAPER-207ENST00000563290 KRTAP3-2Q9BYR7 98 aa3.02□□□□□ -1.93
SCAPER-207ENST00000563290 KRTAP10-6P60371 365 aaPredicted RBP3.02□□□□□ -1.93
SCAPER-207ENST00000563290 PKD1P98161 4303 aa3.01□□□□□ -1.93
SCAPER-207ENST00000563290 PRO2289Q9P1D8 64 aa3.01□□□□□ -1.93
SCAPER-207ENST00000563290 SACSQ9NZJ4 4579 aa3.01□□□□□ -1.93
SCAPER-207ENST00000563290 VPS13BQ7Z7G8 4022 aa3.01□□□□□ -1.93
SCAPER-207ENST00000563290 LRP1BQ9NZR2 4599 aa3.01□□□□□ -1.93
SCAPER-207ENST00000563290 MT1HL1P0DM35 61 aa3□□□□□ -1.93
SCAPER-207ENST00000563290 PKHD1L1Q86WI1 4243 aa2.99□□□□□ -1.93
SCAPER-207ENST00000563290 KRTAP12-2P59991 146 aa2.95□□□□□ -1.94
SCAPER-207ENST00000563290 FAT2Q9NYQ8 4349 aa2.95□□□□□ -1.94
SCAPER-207ENST00000563290 DNHD1Q96M86 4753 aa2.94□□□□□ -1.94
SCAPER-207ENST00000563290 KRTAP4-5Q9BYR2 181 aa2.94□□□□□ -1.94
SCAPER-207ENST00000563290 PKHD1P08F94 4074 aa2.93□□□□□ -1.94
SCAPER-207ENST00000563290 KRTAP10-10P60014 251 aa2.92□□□□□ -1.94
SCAPER-207ENST00000563290 KRTAP12-1P59990 96 aa2.91□□□□□ -1.94
SCAPER-207ENST00000563290 TNP1P09430 55 aa2.9□□□□□ -1.95
SCAPER-207ENST00000563290 APOBP04114 4563 aaKnown RBP2.89□□□□□ -1.95
SCAPER-207ENST00000563290 INE1O15225 51 aa2.88□□□□□ -1.95
SCAPER-207ENST00000563290 MYCBP2O75592 4640 aa2.87□□□□□ -1.95
SCAPER-207ENST00000563290 TNXBP22105 4242 aa2.87□□□□□ -1.95
SCAPER-207ENST00000563290 LRP1Q07954 4544 aaKnown RBP2.84□□□□□ -1.95
SCAPER-207ENST00000563290 HYDINQ4G0P3 5121 aa2.84□□□□□ -1.96
SCAPER-207ENST00000563290 HSPG2P98160 4391 aa2.82□□□□□ -1.96
SCAPER-207ENST00000563290 FAT3Q8TDW7 4589 aa2.81□□□□□ -1.96
SCAPER-207ENST00000563290 DYNC1H1Q14204 4646 aaKnown RBP2.8□□□□□ -1.96
SCAPER-207ENST00000563290 FAT1Q14517 4588 aa2.77□□□□□ -1.97
SCAPER-207ENST00000563290 RYR1P21817 5038 aa2.69□□□□□ -1.98
SCAPER-207ENST00000563290 LPAP08519 4548 aa2.67□□□□□ -1.98
SCAPER-207ENST00000563290 KRTAP17-1Q9BYP8 105 aa2.66□□□□□ -1.98
SCAPER-207ENST00000563290 KRTAP4-1Q9BYQ7 146 aa2.66□□□□□ -1.98
SCAPER-207ENST00000563290 KIAA1109Q2LD37 5005 aa2.66□□□□□ -1.98
SCAPER-207ENST00000563290 RYR2Q92736 4967 aa2.64□□□□□ -1.99
SCAPER-207ENST00000563290 RYR3Q15413 4870 aa2.64□□□□□ -1.99
SCAPER-207ENST00000563290 SPRR5A0A1B0GTR4 108 aa2.63□□□□□ -1.99
SCAPER-207ENST00000563290 LORP23490 312 aaPredicted RBP2.63□□□□□ -1.99
SCAPER-207ENST00000563290 MT1HP80294 61 aa2.57□□□□□ -2
SCAPER-207ENST00000563290 KMT2CQ8NEZ4 4911 aaKnown RBP2.57□□□□□ -2
SCAPER-207ENST00000563290 BIRC6Q9NR09 4857 aa2.55□□□□□ -2
SCAPER-207ENST00000563290 MUC17Q685J3 4493 aa2.54□□□□□ -2
SCAPER-207ENST00000563290 LRP2P98164 4655 aa2.53□□□□□ -2
SCAPER-207ENST00000563290 LCE2CQ5TA81 110 aa2.52□□□□□ -2.01
SCAPER-207ENST00000563290 LCE2BO14633 110 aa2.52□□□□□ -2.01
SCAPER-207ENST00000563290 MT2AP02795 61 aa2.51□□□□□ -2.01
SCAPER-207ENST00000563290 HERC2O95714 4834 aa2.51□□□□□ -2.01
SCAPER-207ENST00000563290 FLGP20930 4061 aaPredicted RBP2.51□□□□□ -2.01
SCAPER-207ENST00000563290 KRTAP10-12P60413 245 aa2.51□□□□□ -2.01
SCAPER-207ENST00000563290 SPRR2GQ9BYE4 73 aa2.48□□□□□ -2.01
SCAPER-207ENST00000563290 MT1FP04733 61 aa2.47□□□□□ -2.01
SCAPER-207ENST00000563290 KRTAP19-2Q3LHN2 52 aa2.44□□□□□ -2.02
SCAPER-207ENST00000563290 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
SCAPER-207ENST00000563290 LCE3AQ5TA76 89 aa2.43□□□□□ -2.02
SCAPER-207ENST00000563290 HERC1Q15751 4861 aa2.4□□□□□ -2.02
SCAPER-207ENST00000563290 EPPK1P58107 5090 aaKnown RBP2.38□□□□□ -2.03
SCAPER-207ENST00000563290 ABCA13Q86UQ4 5058 aa2.37□□□□□ -2.03
SCAPER-207ENST00000563290 KRTAP19-1Q8IUB9 90 aa2.37□□□□□ -2.03
SCAPER-207ENST00000563290 KRTAP19-8Q3LI54 63 aa2.37□□□□□ -2.03
SCAPER-207ENST00000563290 KRTAP8-1Q8IUC2 63 aa2.36□□□□□ -2.03
SCAPER-207ENST00000563290 KRTAP9-8Q9BYQ0 159 aa2.35□□□□□ -2.03
SCAPER-207ENST00000563290 PCLOQ9Y6V0 5065 aa2.35□□□□□ -2.03
SCAPER-207ENST00000563290 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.03
SCAPER-207ENST00000563290 LCE2AQ5TA79 106 aaPredicted RBP2.3□□□□□ -2.04
SCAPER-207ENST00000563290 KRTAP19-4Q3LI73 84 aa2.3□□□□□ -2.04
SCAPER-207ENST00000563290 KRTAP9-3Q9BYQ3 159 aa2.29□□□□□ -2.04
SCAPER-207ENST00000563290 MT1BP07438 61 aa2.29□□□□□ -2.04
SCAPER-207ENST00000563290 SYNE1Q8NF91 8797 aaKnown RBP2.28□□□□□ -2.05
SCAPER-207ENST00000563290 CRCT1Q9UGL9 99 aa2.27□□□□□ -2.05
SCAPER-207ENST00000563290 KRTAP10-5P60370 271 aa2.27□□□□□ -2.05
SCAPER-207ENST00000563290 MT1XP80297 61 aa2.26□□□□□ -2.05
SCAPER-207ENST00000563290 KRTAP10-7P60409 375 aaPredicted RBP2.25□□□□□ -2.05
SCAPER-207ENST00000563290 KRTAP19-5Q3LI72 72 aa2.24□□□□□ -2.05
SCAPER-207ENST00000563290 MT3P25713 68 aa2.24□□□□□ -2.05
SCAPER-207ENST00000563290 SPRR2FQ96RM1 72 aa2.22□□□□□ -2.05
SCAPER-207ENST00000563290 KRTAP9-6A0A140TA67 174 aa2.2□□□□□ -2.06
SCAPER-207ENST00000563290 MUC2Q02817 5179 aa2.19□□□□□ -2.06
SCAPER-207ENST00000563290 RNF213Q63HN8 5207 aa2.18□□□□□ -2.06
SCAPER-207ENST00000563290 LCE3CQ5T5A8 94 aa2.17□□□□□ -2.06
SCAPER-207ENST00000563290 HMCN2Q8NDA2 5059 aa2.16□□□□□ -2.06
SCAPER-207ENST00000563290 FAT4Q6V0I7 4981 aa2.16□□□□□ -2.06
SCAPER-207ENST00000563290 KRTAP4-8A0A0G2JLE6 195 aa2.12□□□□□ -2.07
SCAPER-207ENST00000563290 KRTAP4-8Q9BYQ9 185 aa2.12□□□□□ -2.07
SCAPER-207ENST00000563290 KRTAP9-2Q9BYQ4 174 aa2.12□□□□□ -2.07
SCAPER-207ENST00000563290 UBR4Q5T4S7 5183 aa2.12□□□□□ -2.07
SCAPER-207ENST00000563290 KRTAP2-3P0C7H8 128 aa2.1□□□□□ -2.07
SCAPER-207ENST00000563290 KRTAP2-4Q9BYR9 128 aa2.1□□□□□ -2.07
SCAPER-207ENST00000563290 KRTAP2-1Q9BYU5 128 aa2.1□□□□□ -2.07
SCAPER-207ENST00000563290 KRTAP19-6Q3LI70 58 aa2.1□□□□□ -2.07
SCAPER-207ENST00000563290 SPRR2EP22531 72 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms