RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 SPTSSBQ8NFR3 76 aa5.87□□□□□ -1.47
SPG11-217ENST00000559511 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
SPG11-217ENST00000559511 ATP11AUNQ6ZP68 121 aa5.85□□□□□ -1.47
SPG11-217ENST00000559511 KRTAP4-5Q9BYR2 181 aa5.85□□□□□ -1.47
SPG11-217ENST00000559511 PCLOQ9Y6V0 5065 aa5.83□□□□□ -1.48
SPG11-217ENST00000559511 ABCA13Q86UQ4 5058 aa5.81□□□□□ -1.48
SPG11-217ENST00000559511 XP32Q5T750 250 aa5.79□□□□□ -1.48
SPG11-217ENST00000559511 A0A0A0MQY5 61 aa5.78□□□□□ -1.48
SPG11-217ENST00000559511 RPL37P61927 97 aaKnown RBP5.78□□□□□ -1.48
SPG11-217ENST00000559511 A6NN06 94 aa5.77□□□□□ -1.49
SPG11-217ENST00000559511 COX6B2Q6YFQ2 88 aa5.77□□□□□ -1.49
SPG11-217ENST00000559511 UQCR11O14957 56 aa5.75□□□□□ -1.49
SPG11-217ENST00000559511 SPATA8Q6RVD6 105 aa5.75□□□□□ -1.49
SPG11-217ENST00000559511 MIR22HGQ0VDD5 57 aa5.74□□□□□ -1.49
SPG11-217ENST00000559511 LPAP08519 4548 aa5.7□□□□□ -1.5
SPG11-217ENST00000559511 LINC01554Q52M75 96 aa5.69□□□□□ -1.5
SPG11-217ENST00000559511 LRP2P98164 4655 aa5.68□□□□□ -1.5
SPG11-217ENST00000559511 TPRXLQ17RH7 258 aa5.68□□□□□ -1.5
SPG11-217ENST00000559511 H0YAA0 97 aa5.63□□□□□ -1.51
SPG11-217ENST00000559511 J3QL48 77 aa5.62□□□□□ -1.51
SPG11-217ENST00000559511 A0A1B0GU33 70 aa5.61□□□□□ -1.51
SPG11-217ENST00000559511 H1FX-AS1Q4G0G2 97 aa5.6□□□□□ -1.51
SPG11-217ENST00000559511 HERC1Q15751 4861 aa5.58□□□□□ -1.52
SPG11-217ENST00000559511 S4R3F8 94 aa5.58□□□□□ -1.52
SPG11-217ENST00000559511 KRTAP10-6P60371 365 aaPredicted RBP5.53□□□□□ -1.52
SPG11-217ENST00000559511 ADM2Q7Z4H4 148 aa5.52□□□□□ -1.53
SPG11-217ENST00000559511 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
SPG11-217ENST00000559511 MUC17Q685J3 4493 aa5.48□□□□□ -1.53
SPG11-217ENST00000559511 SEC61BP60468 96 aaKnown RBP5.47□□□□□ -1.53
SPG11-217ENST00000559511 KRTAP13-4Q3LI77 160 aa5.45□□□□□ -1.54
SPG11-217ENST00000559511 P0C880 135 aa5.45□□□□□ -1.54
SPG11-217ENST00000559511 KRTAP4-1Q9BYQ7 146 aa5.42□□□□□ -1.54
SPG11-217ENST00000559511 CSAG1Q6PB30 78 aa5.39□□□□□ -1.55
SPG11-217ENST00000559511 A0A0D9SG42 100 aa5.37□□□□□ -1.55
SPG11-217ENST00000559511 HMCN2Q8NDA2 5059 aa5.36□□□□□ -1.55
SPG11-217ENST00000559511 K7ERS5 55 aa5.35□□□□□ -1.55
SPG11-217ENST00000559511 KRTAP19-2Q3LHN2 52 aa5.29□□□□□ -1.56
SPG11-217ENST00000559511 LCE2BO14633 110 aa5.29□□□□□ -1.56
SPG11-217ENST00000559511 ROMO1P60602 79 aa5.28□□□□□ -1.56
SPG11-217ENST00000559511 UBR4Q5T4S7 5183 aa5.28□□□□□ -1.56
SPG11-217ENST00000559511 MUC2Q02817 5179 aa5.27□□□□□ -1.57
SPG11-217ENST00000559511 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
SPG11-217ENST00000559511 M0QZ58 72 aa5.24□□□□□ -1.57
SPG11-217ENST00000559511 KRTAP12-1P59990 96 aa5.23□□□□□ -1.57
SPG11-217ENST00000559511 KRTAP25-1Q3LHN0 102 aa5.22□□□□□ -1.57
SPG11-217ENST00000559511 CRIPTQ9P021 101 aa5.21□□□□□ -1.57
SPG11-217ENST00000559511 FLGP20930 4061 aaPredicted RBP5.2□□□□□ -1.58
SPG11-217ENST00000559511 SPINT4Q6UDR6 99 aa5.2□□□□□ -1.58
SPG11-217ENST00000559511 LORP23490 312 aaPredicted RBP5.17□□□□□ -1.58
SPG11-217ENST00000559511 R4GN34 69 aa5.15□□□□□ -1.58
SPG11-217ENST00000559511 RNF213Q63HN8 5207 aa5.13□□□□□ -1.59
SPG11-217ENST00000559511 LCE2CQ5TA81 110 aa5.09□□□□□ -1.59
SPG11-217ENST00000559511 LCE2AQ5TA79 106 aaPredicted RBP5.09□□□□□ -1.59
SPG11-217ENST00000559511 C10orf95Q9H7T3 257 aa5.06□□□□□ -1.6
SPG11-217ENST00000559511 FAT4Q6V0I7 4981 aa5.02□□□□□ -1.61
SPG11-217ENST00000559511 LUZP6Q538Z0 58 aa5.02□□□□□ -1.61
SPG11-217ENST00000559511 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
SPG11-217ENST00000559511 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
SPG11-217ENST00000559511 MT1HP80294 61 aa4.96□□□□□ -1.62
SPG11-217ENST00000559511 M0R2T5 61 aa4.91□□□□□ -1.62
SPG11-217ENST00000559511 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
SPG11-217ENST00000559511 CAMK2N1Q7Z7J9 78 aa4.87□□□□□ -1.63
SPG11-217ENST00000559511 MT2AP02795 61 aa4.81□□□□□ -1.64
SPG11-217ENST00000559511 KRTAP9-8Q9BYQ0 159 aa4.81□□□□□ -1.64
SPG11-217ENST00000559511 SPRR2GQ9BYE4 73 aa4.8□□□□□ -1.64
SPG11-217ENST00000559511 MT1FP04733 61 aa4.79□□□□□ -1.64
SPG11-217ENST00000559511 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
SPG11-217ENST00000559511 KRTAP19-1Q8IUB9 90 aa4.79□□□□□ -1.64
SPG11-217ENST00000559511 KRTAP10-10P60014 251 aa4.76□□□□□ -1.65
SPG11-217ENST00000559511 PLAC4Q8WY50 150 aa4.69□□□□□ -1.66
SPG11-217ENST00000559511 PP632Q6XCG6 107 aa4.68□□□□□ -1.66
SPG11-217ENST00000559511 TNP1P09430 55 aa4.67□□□□□ -1.66
SPG11-217ENST00000559511 KRTAP19-8Q3LI54 63 aa4.63□□□□□ -1.67
SPG11-217ENST00000559511 KRTAP9-3Q9BYQ3 159 aa4.63□□□□□ -1.67
SPG11-217ENST00000559511 MT1BP07438 61 aa4.58□□□□□ -1.68
SPG11-217ENST00000559511 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
SPG11-217ENST00000559511 KRTAP9-2Q9BYQ4 174 aa4.54□□□□□ -1.68
SPG11-217ENST00000559511 KRTAP4-8Q9BYQ9 185 aa4.52□□□□□ -1.69
SPG11-217ENST00000559511 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
SPG11-217ENST00000559511 MT1XP80297 61 aa4.5□□□□□ -1.69
SPG11-217ENST00000559511 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
SPG11-217ENST00000559511 FSIP2Q5CZC0 6907 aa4.46□□□□□ -1.7
SPG11-217ENST00000559511 KRTAP9-6A0A140TA67 174 aa4.37□□□□□ -1.71
SPG11-217ENST00000559511 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.37□□□□□ -1.71
SPG11-217ENST00000559511 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
SPG11-217ENST00000559511 PRO2289Q9P1D8 64 aa4.36□□□□□ -1.71
SPG11-217ENST00000559511 KRTAP8-1Q8IUC2 63 aa4.35□□□□□ -1.71
SPG11-217ENST00000559511 USH2AO75445 5202 aa4.35□□□□□ -1.71
SPG11-217ENST00000559511 KRTAP10-12P60413 245 aa4.34□□□□□ -1.71
SPG11-217ENST00000559511 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
SPG11-217ENST00000559511 LCE3BQ5TA77 95 aa4.31□□□□□ -1.72
SPG11-217ENST00000559511 CRCT1Q9UGL9 99 aa4.28□□□□□ -1.72
SPG11-217ENST00000559511 KRTAP12-3P60328 96 aa4.25□□□□□ -1.73
SPG11-217ENST00000559511 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
SPG11-217ENST00000559511 KMT2DO14686 5537 aa4.21□□□□□ -1.74
SPG11-217ENST00000559511 SSPOA2VEC9 5147 aa4.21□□□□□ -1.74
SPG11-217ENST00000559511 KRTAP4-8A0A0G2JLE6 195 aa4.18□□□□□ -1.74
SPG11-217ENST00000559511 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
SPG11-217ENST00000559511 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
SPG11-217ENST00000559511 KRTAP19-5Q3LI72 72 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms