RNA–Protein interactions for RNA: ENST00000559070.5

RNF213-207, Transcript of ring finger protein 213, humanhuman

TSL 1 (best)

Gene RNF213, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-207ENST00000559070 KIAA1109Q2LD37 5005 aa5.26□□□□□ -1.57
RNF213-207ENST00000559070 DYNC1H1Q14204 4646 aaKnown RBP5.26□□□□□ -1.57
RNF213-207ENST00000559070 KRTAP12-2P59991 146 aa5.24□□□□□ -1.57
RNF213-207ENST00000559070 VPS13DQ5THJ4 4388 aa5.22□□□□□ -1.57
RNF213-207ENST00000559070 LRP1BQ9NZR2 4599 aa5.2□□□□□ -1.58
RNF213-207ENST00000559070 KRTAP12-1P59990 96 aa5.19□□□□□ -1.58
RNF213-207ENST00000559070 KRTAP10-6P60371 365 aaPredicted RBP5.19□□□□□ -1.58
RNF213-207ENST00000559070 DNAH10Q8IVF4 4471 aa5.16□□□□□ -1.58
RNF213-207ENST00000559070 ANK2Q01484 3957 aa5.15□□□□□ -1.58
RNF213-207ENST00000559070 KRTAP13-4Q3LI77 160 aa5.15□□□□□ -1.59
RNF213-207ENST00000559070 RYR3Q15413 4870 aa5.14□□□□□ -1.59
RNF213-207ENST00000559070 KRTAP3-3Q9BYR6 98 aa5.12□□□□□ -1.59
RNF213-207ENST00000559070 NDUFAF8A1L188 74 aa5.11□□□□□ -1.59
RNF213-207ENST00000559070 DNAH17Q9UFH2 4485 aa5.1□□□□□ -1.59
RNF213-207ENST00000559070 LYSTQ99698 3801 aa5.09□□□□□ -1.6
RNF213-207ENST00000559070 KMT2AQ03164 3969 aa5.06□□□□□ -1.6
RNF213-207ENST00000559070 KRTAP3-2Q9BYR7 98 aa5.05□□□□□ -1.6
RNF213-207ENST00000559070 SACSQ9NZJ4 4579 aa5.05□□□□□ -1.6
RNF213-207ENST00000559070 DNAH2Q9P225 4427 aa5.05□□□□□ -1.6
RNF213-207ENST00000559070 DNAH8Q96JB1 4490 aa5.01□□□□□ -1.61
RNF213-207ENST00000559070 KRTAP4-1Q9BYQ7 146 aa5.01□□□□□ -1.61
RNF213-207ENST00000559070 MYCBP2O75592 4640 aa5□□□□□ -1.61
RNF213-207ENST00000559070 FAT2Q9NYQ8 4349 aa4.99□□□□□ -1.61
RNF213-207ENST00000559070 HYDINQ4G0P3 5121 aa4.97□□□□□ -1.61
RNF213-207ENST00000559070 VPS13BQ7Z7G8 4022 aa4.96□□□□□ -1.61
RNF213-207ENST00000559070 KRTAP17-1Q9BYP8 105 aa4.96□□□□□ -1.62
RNF213-207ENST00000559070 DYNC2H1Q8NCM8 4307 aaKnown RBP4.95□□□□□ -1.62
RNF213-207ENST00000559070 HERC2O95714 4834 aa4.94□□□□□ -1.62
RNF213-207ENST00000559070 APOBP04114 4563 aaKnown RBP4.94□□□□□ -1.62
RNF213-207ENST00000559070 FAT3Q8TDW7 4589 aa4.91□□□□□ -1.62
RNF213-207ENST00000559070 LORP23490 312 aaPredicted RBP4.91□□□□□ -1.62
RNF213-207ENST00000559070 LRP1Q07954 4544 aaKnown RBP4.89□□□□□ -1.63
RNF213-207ENST00000559070 RYR2Q92736 4967 aa4.89□□□□□ -1.63
RNF213-207ENST00000559070 MT1HP80294 61 aa4.86□□□□□ -1.63
RNF213-207ENST00000559070 DNAH3Q8TD57 4116 aa4.86□□□□□ -1.63
RNF213-207ENST00000559070 KRTAP10-12P60413 245 aa4.84□□□□□ -1.64
RNF213-207ENST00000559070 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
RNF213-207ENST00000559070 BIRC6Q9NR09 4857 aa4.82□□□□□ -1.64
RNF213-207ENST00000559070 KMT2CQ8NEZ4 4911 aaKnown RBP4.8□□□□□ -1.64
RNF213-207ENST00000559070 CMYA5Q8N3K9 4069 aa4.78□□□□□ -1.64
RNF213-207ENST00000559070 MT2AP02795 61 aa4.76□□□□□ -1.65
RNF213-207ENST00000559070 DNAH6Q9C0G6 4158 aa4.75□□□□□ -1.65
RNF213-207ENST00000559070 LRP2P98164 4655 aa4.72□□□□□ -1.65
RNF213-207ENST00000559070 PKHD1P08F94 4074 aa4.71□□□□□ -1.66
RNF213-207ENST00000559070 PCLOQ9Y6V0 5065 aa4.7□□□□□ -1.66
RNF213-207ENST00000559070 DNAH7Q8WXX0 4024 aa4.68□□□□□ -1.66
RNF213-207ENST00000559070 MT1FP04733 61 aa4.68□□□□□ -1.66
RNF213-207ENST00000559070 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
RNF213-207ENST00000559070 CRCT1Q9UGL9 99 aa4.64□□□□□ -1.67
RNF213-207ENST00000559070 LCE3AQ5TA76 89 aa4.63□□□□□ -1.67
RNF213-207ENST00000559070 HSPG2P98160 4391 aa4.62□□□□□ -1.67
RNF213-207ENST00000559070 KRTAP8-1Q8IUC2 63 aa4.62□□□□□ -1.67
RNF213-207ENST00000559070 SPRR2GQ9BYE4 73 aa4.61□□□□□ -1.67
RNF213-207ENST00000559070 HECTD4Q9Y4D8 3996 aa4.61□□□□□ -1.67
RNF213-207ENST00000559070 FRAS1Q86XX4 4008 aa4.58□□□□□ -1.68
RNF213-207ENST00000559070 EPPK1P58107 5090 aaKnown RBP4.58□□□□□ -1.68
RNF213-207ENST00000559070 HERC1Q15751 4861 aa4.55□□□□□ -1.68
RNF213-207ENST00000559070 ABCA13Q86UQ4 5058 aa4.51□□□□□ -1.69
RNF213-207ENST00000559070 KRTAP23-1A1A580 65 aa4.5□□□□□ -1.69
RNF213-207ENST00000559070 PKD1P98161 4303 aa4.46□□□□□ -1.7
RNF213-207ENST00000559070 KRTAP19-1Q8IUB9 90 aa4.43□□□□□ -1.7
RNF213-207ENST00000559070 LCE2CQ5TA81 110 aa4.42□□□□□ -1.7
RNF213-207ENST00000559070 LPAP08519 4548 aa4.4□□□□□ -1.7
RNF213-207ENST00000559070 UBR4Q5T4S7 5183 aa4.39□□□□□ -1.71
RNF213-207ENST00000559070 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
RNF213-207ENST00000559070 KRTAP9-8Q9BYQ0 159 aa4.39□□□□□ -1.71
RNF213-207ENST00000559070 FSIP2Q5CZC0 6907 aa4.36□□□□□ -1.71
RNF213-207ENST00000559070 KRTAP19-8Q3LI54 63 aa4.35□□□□□ -1.71
RNF213-207ENST00000559070 KRTAP19-5Q3LI72 72 aa4.28□□□□□ -1.72
RNF213-207ENST00000559070 PKHD1L1Q86WI1 4243 aa4.27□□□□□ -1.73
RNF213-207ENST00000559070 MT1BP07438 61 aa4.27□□□□□ -1.73
RNF213-207ENST00000559070 KRTAP9-3Q9BYQ3 159 aa4.26□□□□□ -1.73
RNF213-207ENST00000559070 KRTAP19-2Q3LHN2 52 aa4.26□□□□□ -1.73
RNF213-207ENST00000559070 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
RNF213-207ENST00000559070 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
RNF213-207ENST00000559070 RNF213Q63HN8 5207 aa4.22□□□□□ -1.73
RNF213-207ENST00000559070 MT1XP80297 61 aa4.22□□□□□ -1.73
RNF213-207ENST00000559070 FAT4Q6V0I7 4981 aa4.19□□□□□ -1.74
RNF213-207ENST00000559070 TNXBP22105 4242 aa4.18□□□□□ -1.74
RNF213-207ENST00000559070 MUC17Q685J3 4493 aa4.17□□□□□ -1.74
RNF213-207ENST00000559070 LCE2BO14633 110 aa4.14□□□□□ -1.75
RNF213-207ENST00000559070 KRTAP4-8A0A0G2JLE6 195 aa4.12□□□□□ -1.75
RNF213-207ENST00000559070 KRTAP4-8Q9BYQ9 185 aa4.12□□□□□ -1.75
RNF213-207ENST00000559070 SPRR2EP22531 72 aa4.1□□□□□ -1.75
RNF213-207ENST00000559070 SPRR2BP35325 72 aa4.1□□□□□ -1.75
RNF213-207ENST00000559070 SPRR2AP35326 72 aa4.1□□□□□ -1.75
RNF213-207ENST00000559070 HMCN2Q8NDA2 5059 aa4.09□□□□□ -1.75
RNF213-207ENST00000559070 FLGP20930 4061 aaPredicted RBP4.08□□□□□ -1.76
RNF213-207ENST00000559070 LCE3CQ5T5A8 94 aa4.08□□□□□ -1.76
RNF213-207ENST00000559070 MUC2Q02817 5179 aa4.06□□□□□ -1.76
RNF213-207ENST00000559070 LCE2AQ5TA79 106 aaPredicted RBP4.05□□□□□ -1.76
RNF213-207ENST00000559070 INE1O15225 51 aa4.04□□□□□ -1.76
RNF213-207ENST00000559070 KRTAP9-2Q9BYQ4 174 aa4.04□□□□□ -1.76
RNF213-207ENST00000559070 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
RNF213-207ENST00000559070 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
RNF213-207ENST00000559070 SPRR2DP22532 72 aa3.96□□□□□ -1.78
RNF213-207ENST00000559070 MT1GP13640 62 aa3.93□□□□□ -1.78
RNF213-207ENST00000559070 KRTAP19-6Q3LI70 58 aa3.9□□□□□ -1.78
RNF213-207ENST00000559070 LCE2DQ5TA82 110 aaPredicted RBP3.86□□□□□ -1.79
RNF213-207ENST00000559070 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms