RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 C4orf26Q17RF5 130 aa7.2□□□□□ -1.26
TPM1-215ENST00000558868 FSIP2Q5CZC0 6907 aa7.19□□□□□ -1.26
TPM1-215ENST00000558868 CRCT1Q9UGL9 99 aa7.18□□□□□ -1.26
TPM1-215ENST00000558868 CHKB-CPT1BH3BT56 60 aa7.17□□□□□ -1.26
TPM1-215ENST00000558868 COX6B2Q6YFQ2 88 aa7.16□□□□□ -1.26
TPM1-215ENST00000558868 LOC100996750A0A140TA64 210 aa7.15□□□□□ -1.26
TPM1-215ENST00000558868 KRTAP4-6Q9BYQ5 205 aa7.15□□□□□ -1.26
TPM1-215ENST00000558868 V9GYY9 64 aa7.12□□□□□ -1.27
TPM1-215ENST00000558868 Q1T7F1 81 aa7.08□□□□□ -1.28
TPM1-215ENST00000558868 SPTSSBQ8NFR3 76 aa7.07□□□□□ -1.28
TPM1-215ENST00000558868 MPLKIPQ8TAP9 179 aa7.07□□□□□ -1.28
TPM1-215ENST00000558868 KRTAP3-1Q9BYR8 98 aa7.07□□□□□ -1.28
TPM1-215ENST00000558868 RBM12B-AS1Q9P1G2 102 aa7.06□□□□□ -1.28
TPM1-215ENST00000558868 LPAP08519 4548 aa7.04□□□□□ -1.28
TPM1-215ENST00000558868 LINC01558Q9Y6Z2 57 aa7□□□□□ -1.29
TPM1-215ENST00000558868 KRTAP9-7A8MTY7 169 aa6.98□□□□□ -1.29
TPM1-215ENST00000558868 H1FX-AS1Q4G0G2 97 aa6.98□□□□□ -1.29
TPM1-215ENST00000558868 MUC17Q685J3 4493 aa6.95□□□□□ -1.3
TPM1-215ENST00000558868 S4R3F8 94 aa6.94□□□□□ -1.3
TPM1-215ENST00000558868 PRR15LQ9BU68 103 aa6.93□□□□□ -1.3
TPM1-215ENST00000558868 PSPHP1O15172 72 aa6.91□□□□□ -1.3
TPM1-215ENST00000558868 KRTAP4-1Q9BYQ7 146 aa6.9□□□□□ -1.3
TPM1-215ENST00000558868 A0A1B0GU69 56 aa6.88□□□□□ -1.31
TPM1-215ENST00000558868 SEC61GP60059 68 aa6.88□□□□□ -1.31
TPM1-215ENST00000558868 LCA10Q71F78 164 aa6.87□□□□□ -1.31
TPM1-215ENST00000558868 Q5VV11 94 aa6.85□□□□□ -1.31
TPM1-215ENST00000558868 CSAG1Q6PB30 78 aa6.79□□□□□ -1.32
TPM1-215ENST00000558868 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.77□□□□□ -1.33
TPM1-215ENST00000558868 A6NED7 52 aa6.74□□□□□ -1.33
TPM1-215ENST00000558868 KRTAP19-2Q3LHN2 52 aa6.73□□□□□ -1.33
TPM1-215ENST00000558868 UQCR11O14957 56 aa6.69□□□□□ -1.34
TPM1-215ENST00000558868 BRK1Q8WUW1 75 aa6.69□□□□□ -1.34
TPM1-215ENST00000558868 A0A1B0GU33 70 aa6.65□□□□□ -1.34
TPM1-215ENST00000558868 H0YAA0 97 aa6.65□□□□□ -1.34
TPM1-215ENST00000558868 CDC42SE1Q9NRR8 79 aa6.63□□□□□ -1.35
TPM1-215ENST00000558868 MIR22HGQ0VDD5 57 aa6.61□□□□□ -1.35
TPM1-215ENST00000558868 ADM2Q7Z4H4 148 aa6.61□□□□□ -1.35
TPM1-215ENST00000558868 KRTAP10-6P60371 365 aaPredicted RBP6.6□□□□□ -1.35
TPM1-215ENST00000558868 SPATA8Q6RVD6 105 aa6.6□□□□□ -1.35
TPM1-215ENST00000558868 KRTAP4-8Q9BYQ9 185 aa6.6□□□□□ -1.35
TPM1-215ENST00000558868 PRO0628Q9UI54 55 aa6.59□□□□□ -1.35
TPM1-215ENST00000558868 FLGP20930 4061 aaPredicted RBP6.56□□□□□ -1.36
TPM1-215ENST00000558868 P0C880 135 aa6.54□□□□□ -1.36
TPM1-215ENST00000558868 M0QZ58 72 aa6.48□□□□□ -1.37
TPM1-215ENST00000558868 A8MU10 97 aa6.47□□□□□ -1.37
TPM1-215ENST00000558868 M0R2T5 61 aa6.46□□□□□ -1.38
TPM1-215ENST00000558868 MT1HP80294 61 aa6.45□□□□□ -1.38
TPM1-215ENST00000558868 KRTAP13-4Q3LI77 160 aa6.4□□□□□ -1.38
TPM1-215ENST00000558868 R4GN34 69 aa6.4□□□□□ -1.38
TPM1-215ENST00000558868 K7ERS5 55 aa6.38□□□□□ -1.39
TPM1-215ENST00000558868 CRIPTQ9P021 101 aa6.38□□□□□ -1.39
TPM1-215ENST00000558868 KRTAP4-12Q9BQ66 201 aa6.35□□□□□ -1.39
TPM1-215ENST00000558868 PMAIP1Q13794 54 aa6.34□□□□□ -1.39
TPM1-215ENST00000558868 A0A0D9SG42 100 aa6.33□□□□□ -1.4
TPM1-215ENST00000558868 LCE3BQ5TA77 95 aa6.32□□□□□ -1.4
TPM1-215ENST00000558868 SYNE2Q8WXH0 6885 aaKnown RBP6.31□□□□□ -1.4
TPM1-215ENST00000558868 SSPOA2VEC9 5147 aa6.3□□□□□ -1.4
TPM1-215ENST00000558868 A6NN06 94 aa6.27□□□□□ -1.41
TPM1-215ENST00000558868 KRTAP19-1Q8IUB9 90 aa6.27□□□□□ -1.41
TPM1-215ENST00000558868 LINC01554Q52M75 96 aa6.24□□□□□ -1.41
TPM1-215ENST00000558868 MT2AP02795 61 aa6.21□□□□□ -1.42
TPM1-215ENST00000558868 KRTAP12-1P59990 96 aa6.21□□□□□ -1.42
TPM1-215ENST00000558868 SPINT4Q6UDR6 99 aa6.21□□□□□ -1.42
TPM1-215ENST00000558868 KRTAP9-8Q9BYQ0 159 aa6.21□□□□□ -1.42
TPM1-215ENST00000558868 MACF1Q9UPN3 7388 aaKnown RBP6.21□□□□□ -1.42
TPM1-215ENST00000558868 KRTAP10-10P60014 251 aa6.2□□□□□ -1.42
TPM1-215ENST00000558868 FCGBPQ9Y6R7 5405 aaPredicted RBP6.19□□□□□ -1.42
TPM1-215ENST00000558868 KRTAP12-2P59991 146 aa6.17□□□□□ -1.42
TPM1-215ENST00000558868 USH2AO75445 5202 aa6.17□□□□□ -1.42
TPM1-215ENST00000558868 MT1FP04733 61 aa6.16□□□□□ -1.42
TPM1-215ENST00000558868 KRTAP9-9Q9BYP9 154 aa6.16□□□□□ -1.42
TPM1-215ENST00000558868 KRTAP9-4Q9BYQ2 154 aa6.16□□□□□ -1.42
TPM1-215ENST00000558868 SPRR2GQ9BYE4 73 aa6.15□□□□□ -1.42
TPM1-215ENST00000558868 SVIPQ8NHG7 77 aa6.13□□□□□ -1.43
TPM1-215ENST00000558868 KTN1-AS1Q86SY8 53 aa6.1□□□□□ -1.43
TPM1-215ENST00000558868 ROMO1P60602 79 aa6.06□□□□□ -1.44
TPM1-215ENST00000558868 KRTAP4-8A0A0G2JLE6 195 aa6.05□□□□□ -1.44
TPM1-215ENST00000558868 NEBP20929 6669 aa6.04□□□□□ -1.44
TPM1-215ENST00000558868 PLAC4Q8WY50 150 aa6.02□□□□□ -1.45
TPM1-215ENST00000558868 KRTAP20-1Q3LI63 56 aa6.01□□□□□ -1.45
TPM1-215ENST00000558868 CAMK2N1Q7Z7J9 78 aa6.01□□□□□ -1.45
TPM1-215ENST00000558868 KRTAP9-3Q9BYQ3 159 aa6□□□□□ -1.45
TPM1-215ENST00000558868 KRTAP19-8Q3LI54 63 aa5.99□□□□□ -1.45
TPM1-215ENST00000558868 KRTAP6-3Q3LI67 103 aa5.89□□□□□ -1.47
TPM1-215ENST00000558868 LCE1DQ5T752 114 aa5.89□□□□□ -1.47
TPM1-215ENST00000558868 H3BS24 57 aa5.87□□□□□ -1.47
TPM1-215ENST00000558868 PRAC1Q96KF2 57 aa5.86□□□□□ -1.47
TPM1-215ENST00000558868 C10orf95Q9H7T3 257 aa5.86□□□□□ -1.47
TPM1-215ENST00000558868 MT1BP07438 61 aa5.85□□□□□ -1.47
TPM1-215ENST00000558868 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
TPM1-215ENST00000558868 KRTAP25-1Q3LHN0 102 aa5.8□□□□□ -1.48
TPM1-215ENST00000558868 LCE4AQ5TA78 99 aa5.8□□□□□ -1.48
TPM1-215ENST00000558868 MUC12Q9UKN1 5478 aa5.79□□□□□ -1.48
TPM1-215ENST00000558868 TNP1P09430 55 aa5.74□□□□□ -1.49
TPM1-215ENST00000558868 PRO2289Q9P1D8 64 aa5.73□□□□□ -1.49
TPM1-215ENST00000558868 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
TPM1-215ENST00000558868 KRTAP4-9Q9BYQ8 210 aa5.72□□□□□ -1.49
TPM1-215ENST00000558868 GPR98Q8WXG9 6306 aa5.7□□□□□ -1.5
TPM1-215ENST00000558868 MT1XP80297 61 aa5.68□□□□□ -1.5
TPM1-215ENST00000558868 KRTAP10-5P60370 271 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms