RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 KRTAP4-7Q9BYR0 210 aa3.63□□□□□ -1.83
IDH3A-206ENST00000558535 RYR1P21817 5038 aa3.63□□□□□ -1.83
IDH3A-206ENST00000558535 PKD1P98161 4303 aa3.62□□□□□ -1.83
IDH3A-206ENST00000558535 KRTAP9-2Q9BYQ4 174 aa3.62□□□□□ -1.83
IDH3A-206ENST00000558535 RPL37P61927 97 aaKnown RBP3.61□□□□□ -1.83
IDH3A-206ENST00000558535 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.61□□□□□ -1.83
IDH3A-206ENST00000558535 PCLOQ9Y6V0 5065 aa3.61□□□□□ -1.83
IDH3A-206ENST00000558535 KRTAP9-6A0A140TA67 174 aa3.6□□□□□ -1.83
IDH3A-206ENST00000558535 TPRXLQ17RH7 258 aa3.6□□□□□ -1.83
IDH3A-206ENST00000558535 PKHD1P08F94 4074 aa3.6□□□□□ -1.83
IDH3A-206ENST00000558535 KRTAP10-2P60368 255 aa3.6□□□□□ -1.83
IDH3A-206ENST00000558535 KRTAP7-1Q8IUC3 87 aa3.59□□□□□ -1.83
IDH3A-206ENST00000558535 PRLHP81277 87 aa3.58□□□□□ -1.84
IDH3A-206ENST00000558535 LRP1BQ9NZR2 4599 aa3.58□□□□□ -1.84
IDH3A-206ENST00000558535 HSPG2P98160 4391 aa3.58□□□□□ -1.84
IDH3A-206ENST00000558535 C14orf177Q52M58 125 aa3.58□□□□□ -1.84
IDH3A-206ENST00000558535 KRTAP10-1P60331 282 aa3.56□□□□□ -1.84
IDH3A-206ENST00000558535 Q5VSD8 79 aa3.56□□□□□ -1.84
IDH3A-206ENST00000558535 PRO2289Q9P1D8 64 aa3.56□□□□□ -1.84
IDH3A-206ENST00000558535 APOBP04114 4563 aaKnown RBP3.55□□□□□ -1.84
IDH3A-206ENST00000558535 DNAH5Q8TE73 4624 aa3.55□□□□□ -1.84
IDH3A-206ENST00000558535 KRTAP4-5Q9BYR2 181 aa3.55□□□□□ -1.84
IDH3A-206ENST00000558535 PLAC4Q8WY50 150 aa3.55□□□□□ -1.84
IDH3A-206ENST00000558535 ABCA13Q86UQ4 5058 aa3.54□□□□□ -1.84
IDH3A-206ENST00000558535 LORP23490 312 aaPredicted RBP3.53□□□□□ -1.84
IDH3A-206ENST00000558535 A0A096LNI7 61 aa3.53□□□□□ -1.85
IDH3A-206ENST00000558535 KRTAP13-1Q8IUC0 172 aa3.53□□□□□ -1.85
IDH3A-206ENST00000558535 SRRM2Q9UQ35 2752 aaKnown RBP3.51□□□□□ -1.85
IDH3A-206ENST00000558535 VPS13BQ7Z7G8 4022 aa3.51□□□□□ -1.85
IDH3A-206ENST00000558535 LCE3BQ5TA77 95 aa3.51□□□□□ -1.85
IDH3A-206ENST00000558535 DNAH8Q96JB1 4490 aa3.48□□□□□ -1.85
IDH3A-206ENST00000558535 SMR3BP02814 79 aaPredicted RBP3.47□□□□□ -1.85
IDH3A-206ENST00000558535 SPINK1P00995 79 aa3.46□□□□□ -1.86
IDH3A-206ENST00000558535 TYMSOSQ8TAI1 123 aa3.46□□□□□ -1.86
IDH3A-206ENST00000558535 DMBT1Q9UGM3 2413 aaPredicted RBP3.45□□□□□ -1.86
IDH3A-206ENST00000558535 INE1O15225 51 aa3.44□□□□□ -1.86
IDH3A-206ENST00000558535 KRTAP10-4P60372 401 aaPredicted RBP3.44□□□□□ -1.86
IDH3A-206ENST00000558535 FAT1Q14517 4588 aa3.43□□□□□ -1.86
IDH3A-206ENST00000558535 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
IDH3A-206ENST00000558535 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
IDH3A-206ENST00000558535 SPACA4Q8TDM5 124 aa3.42□□□□□ -1.86
IDH3A-206ENST00000558535 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
IDH3A-206ENST00000558535 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
IDH3A-206ENST00000558535 MYCBP2O75592 4640 aa3.39□□□□□ -1.87
IDH3A-206ENST00000558535 SPINK6Q6UWN8 80 aa3.39□□□□□ -1.87
IDH3A-206ENST00000558535 PKHD1L1Q86WI1 4243 aa3.38□□□□□ -1.87
IDH3A-206ENST00000558535 HERC1Q15751 4861 aa3.37□□□□□ -1.87
IDH3A-206ENST00000558535 KRTAP4-9Q9BYQ8 210 aa3.37□□□□□ -1.87
IDH3A-206ENST00000558535 S4R3F8 94 aa3.37□□□□□ -1.87
IDH3A-206ENST00000558535 FLG2Q5D862 2391 aaPredicted RBP3.37□□□□□ -1.87
IDH3A-206ENST00000558535 PP632Q6XCG6 107 aa3.36□□□□□ -1.87
IDH3A-206ENST00000558535 LCE1DQ5T752 114 aa3.34□□□□□ -1.87
IDH3A-206ENST00000558535 MT1HL1P0DM35 61 aa3.34□□□□□ -1.88
IDH3A-206ENST00000558535 R4GN34 69 aa3.34□□□□□ -1.88
IDH3A-206ENST00000558535 FAT3Q8TDW7 4589 aa3.33□□□□□ -1.88
IDH3A-206ENST00000558535 HMCN2Q8NDA2 5059 aa3.32□□□□□ -1.88
IDH3A-206ENST00000558535 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
IDH3A-206ENST00000558535 KRTAP10-8P60410 259 aa3.3□□□□□ -1.88
IDH3A-206ENST00000558535 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.88
IDH3A-206ENST00000558535 KRTAP3-1Q9BYR8 98 aa3.28□□□□□ -1.88
IDH3A-206ENST00000558535 LRP1Q07954 4544 aaKnown RBP3.27□□□□□ -1.89
IDH3A-206ENST00000558535 M0QZ58 72 aa3.26□□□□□ -1.89
IDH3A-206ENST00000558535 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
IDH3A-206ENST00000558535 RPS29P62273 56 aaKnown RBP3.25□□□□□ -1.89
IDH3A-206ENST00000558535 TNXBP22105 4242 aa3.25□□□□□ -1.89
IDH3A-206ENST00000558535 KRTAP12-1P59990 96 aa3.23□□□□□ -1.89
IDH3A-206ENST00000558535 A0A0D9SG42 100 aa3.22□□□□□ -1.89
IDH3A-206ENST00000558535 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
IDH3A-206ENST00000558535 KRTAP13-4Q3LI77 160 aa3.21□□□□□ -1.9
IDH3A-206ENST00000558535 KRTAP1-4P0C5Y4 121 aa3.2□□□□□ -1.9
IDH3A-206ENST00000558535 UBR4Q5T4S7 5183 aa3.19□□□□□ -1.9
IDH3A-206ENST00000558535 KRTAP13-2Q52LG2 175 aa3.17□□□□□ -1.9
IDH3A-206ENST00000558535 RNF213Q63HN8 5207 aa3.13□□□□□ -1.91
IDH3A-206ENST00000558535 LRP2P98164 4655 aa3.13□□□□□ -1.91
IDH3A-206ENST00000558535 C9orf92A6NGG3 77 aa3.06□□□□□ -1.92
IDH3A-206ENST00000558535 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
IDH3A-206ENST00000558535 MUC17Q685J3 4493 aa3.05□□□□□ -1.92
IDH3A-206ENST00000558535 LPAP08519 4548 aa3.01□□□□□ -1.93
IDH3A-206ENST00000558535 FAT4Q6V0I7 4981 aa2.95□□□□□ -1.94
IDH3A-206ENST00000558535 MUC2Q02817 5179 aa2.92□□□□□ -1.94
IDH3A-206ENST00000558535 TNP1P09430 55 aa2.89□□□□□ -1.95
IDH3A-206ENST00000558535 KRTAP4-1Q9BYQ7 146 aa2.88□□□□□ -1.95
IDH3A-206ENST00000558535 CRCT1Q9UGL9 99 aa2.85□□□□□ -1.95
IDH3A-206ENST00000558535 KRTAP19-2Q3LHN2 52 aa2.85□□□□□ -1.95
IDH3A-206ENST00000558535 MT1HP80294 61 aa2.84□□□□□ -1.95
IDH3A-206ENST00000558535 KRTAP19-1Q8IUB9 90 aa2.83□□□□□ -1.96
IDH3A-206ENST00000558535 M0R2T5 61 aa2.8□□□□□ -1.96
IDH3A-206ENST00000558535 KRTAP9-7A8MTY7 169 aa2.79□□□□□ -1.96
IDH3A-206ENST00000558535 FLGP20930 4061 aaPredicted RBP2.74□□□□□ -1.97
IDH3A-206ENST00000558535 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
IDH3A-206ENST00000558535 KRTAP10-10P60014 251 aa2.71□□□□□ -1.98
IDH3A-206ENST00000558535 KRTAP19-4Q3LI73 84 aa2.67□□□□□ -1.98
IDH3A-206ENST00000558535 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
IDH3A-206ENST00000558535 LCE5AQ5TCM9 118 aa2.67□□□□□ -1.98
IDH3A-206ENST00000558535 MT2AP02795 61 aa2.63□□□□□ -1.99
IDH3A-206ENST00000558535 KRTAP9-3Q9BYQ3 159 aa2.6□□□□□ -1.99
IDH3A-206ENST00000558535 MT1FP04733 61 aa2.59□□□□□ -1.99
IDH3A-206ENST00000558535 FSIP2Q5CZC0 6907 aa2.59□□□□□ -1.99
IDH3A-206ENST00000558535 KRTAP8-1Q8IUC2 63 aa2.58□□□□□ -2
IDH3A-206ENST00000558535 USH2AO75445 5202 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms