RNA–Protein interactions for RNA: ENST00000558357.5

INO80-205, Transcript of INO80 complex subunit, humanhuman

TSL 1 (best)

Gene INO80, Length 5,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-205ENST00000558357 PRKDCP78527 4128 aaKnown RBP4.97□□□□□ -1.61
INO80-205ENST00000558357 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
INO80-205ENST00000558357 KRTAP23-1A1A580 65 aa4.96□□□□□ -1.62
INO80-205ENST00000558357 ANK2Q01484 3957 aa4.94□□□□□ -1.62
INO80-205ENST00000558357 PLECQ15149 4684 aaKnown RBP4.93□□□□□ -1.62
INO80-205ENST00000558357 LCE3AQ5TA76 89 aa4.87□□□□□ -1.63
INO80-205ENST00000558357 STARD9Q9P2P6 4700 aa4.87□□□□□ -1.63
INO80-205ENST00000558357 KRTAP10-4P60372 401 aaPredicted RBP4.8□□□□□ -1.64
INO80-205ENST00000558357 KRTAP4-5Q9BYR2 181 aa4.8□□□□□ -1.64
INO80-205ENST00000558357 DNAH10Q8IVF4 4471 aa4.78□□□□□ -1.64
INO80-205ENST00000558357 DNAH1Q9P2D7 4330 aa4.77□□□□□ -1.65
INO80-205ENST00000558357 DNAH11Q96DT5 4516 aa4.77□□□□□ -1.65
INO80-205ENST00000558357 DNAH5Q8TE73 4624 aa4.77□□□□□ -1.65
INO80-205ENST00000558357 CMYA5Q8N3K9 4069 aa4.76□□□□□ -1.65
INO80-205ENST00000558357 VPS13DQ5THJ4 4388 aa4.75□□□□□ -1.65
INO80-205ENST00000558357 ALMS1Q8TCU4 4167 aa4.75□□□□□ -1.65
INO80-205ENST00000558357 KRTAP10-5P60370 271 aa4.73□□□□□ -1.65
INO80-205ENST00000558357 DNAH3Q8TD57 4116 aa4.73□□□□□ -1.65
INO80-205ENST00000558357 LORP23490 312 aaPredicted RBP4.71□□□□□ -1.66
INO80-205ENST00000558357 KMT2AQ03164 3969 aa4.71□□□□□ -1.66
INO80-205ENST00000558357 DNAH17Q9UFH2 4485 aa4.68□□□□□ -1.66
INO80-205ENST00000558357 KRTAP8-1Q8IUC2 63 aa4.68□□□□□ -1.66
INO80-205ENST00000558357 DYNC1H1Q14204 4646 aaKnown RBP4.67□□□□□ -1.66
INO80-205ENST00000558357 FAT1Q14517 4588 aa4.67□□□□□ -1.66
INO80-205ENST00000558357 KIAA1109Q2LD37 5005 aa4.65□□□□□ -1.66
INO80-205ENST00000558357 LYSTQ99698 3801 aa4.64□□□□□ -1.67
INO80-205ENST00000558357 LRP1BQ9NZR2 4599 aa4.63□□□□□ -1.67
INO80-205ENST00000558357 RYR3Q15413 4870 aa4.58□□□□□ -1.68
INO80-205ENST00000558357 RYR1P21817 5038 aa4.58□□□□□ -1.68
INO80-205ENST00000558357 DNAH2Q9P225 4427 aa4.57□□□□□ -1.68
INO80-205ENST00000558357 DYNC2H1Q8NCM8 4307 aaKnown RBP4.57□□□□□ -1.68
INO80-205ENST00000558357 DNAH7Q8WXX0 4024 aa4.56□□□□□ -1.68
INO80-205ENST00000558357 SACSQ9NZJ4 4579 aa4.56□□□□□ -1.68
INO80-205ENST00000558357 HYDINQ4G0P3 5121 aa4.55□□□□□ -1.68
INO80-205ENST00000558357 KMT2CQ8NEZ4 4911 aaKnown RBP4.54□□□□□ -1.68
INO80-205ENST00000558357 RYR2Q92736 4967 aa4.54□□□□□ -1.68
INO80-205ENST00000558357 DNAH8Q96JB1 4490 aa4.53□□□□□ -1.68
INO80-205ENST00000558357 FAT2Q9NYQ8 4349 aa4.48□□□□□ -1.69
INO80-205ENST00000558357 DNAH6Q9C0G6 4158 aa4.46□□□□□ -1.69
INO80-205ENST00000558357 APOBP04114 4563 aaKnown RBP4.46□□□□□ -1.7
INO80-205ENST00000558357 KRTAP17-1Q9BYP8 105 aa4.45□□□□□ -1.7
INO80-205ENST00000558357 PKHD1P08F94 4074 aa4.44□□□□□ -1.7
INO80-205ENST00000558357 VPS13BQ7Z7G8 4022 aa4.43□□□□□ -1.7
INO80-205ENST00000558357 HECTD4Q9Y4D8 3996 aa4.41□□□□□ -1.7
INO80-205ENST00000558357 MT1HP80294 61 aa4.41□□□□□ -1.7
INO80-205ENST00000558357 LRP1Q07954 4544 aaKnown RBP4.39□□□□□ -1.71
INO80-205ENST00000558357 SPRR2GQ9BYE4 73 aa4.39□□□□□ -1.71
INO80-205ENST00000558357 FRAS1Q86XX4 4008 aa4.39□□□□□ -1.71
INO80-205ENST00000558357 KRTAP4-1Q9BYQ7 146 aa4.38□□□□□ -1.71
INO80-205ENST00000558357 MT2AP02795 61 aa4.37□□□□□ -1.71
INO80-205ENST00000558357 HERC2O95714 4834 aa4.36□□□□□ -1.71
INO80-205ENST00000558357 MYCBP2O75592 4640 aa4.36□□□□□ -1.71
INO80-205ENST00000558357 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
INO80-205ENST00000558357 FAT3Q8TDW7 4589 aa4.34□□□□□ -1.71
INO80-205ENST00000558357 BIRC6Q9NR09 4857 aa4.33□□□□□ -1.72
INO80-205ENST00000558357 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
INO80-205ENST00000558357 EPPK1P58107 5090 aaKnown RBP4.32□□□□□ -1.72
INO80-205ENST00000558357 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
INO80-205ENST00000558357 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
INO80-205ENST00000558357 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
INO80-205ENST00000558357 PKD1P98161 4303 aa4.27□□□□□ -1.73
INO80-205ENST00000558357 HSPG2P98160 4391 aa4.27□□□□□ -1.73
INO80-205ENST00000558357 MT1FP04733 61 aa4.26□□□□□ -1.73
INO80-205ENST00000558357 ABCA13Q86UQ4 5058 aa4.17□□□□□ -1.74
INO80-205ENST00000558357 LRP2P98164 4655 aa4.16□□□□□ -1.74
INO80-205ENST00000558357 PCLOQ9Y6V0 5065 aa4.05□□□□□ -1.76
INO80-205ENST00000558357 KRTAP19-8Q3LI54 63 aa4.03□□□□□ -1.76
INO80-205ENST00000558357 LCE3BQ5TA77 95 aa4.03□□□□□ -1.76
INO80-205ENST00000558357 SPRR2EP22531 72 aa4.02□□□□□ -1.77
INO80-205ENST00000558357 SPRR2BP35325 72 aa4.02□□□□□ -1.77
INO80-205ENST00000558357 SPRR2AP35326 72 aa4.02□□□□□ -1.77
INO80-205ENST00000558357 LPAP08519 4548 aa4.02□□□□□ -1.77
INO80-205ENST00000558357 HERC1Q15751 4861 aa4.01□□□□□ -1.77
INO80-205ENST00000558357 PKHD1L1Q86WI1 4243 aa3.99□□□□□ -1.77
INO80-205ENST00000558357 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
INO80-205ENST00000558357 KRTAP19-1Q8IUB9 90 aa3.97□□□□□ -1.77
INO80-205ENST00000558357 TNXBP22105 4242 aa3.95□□□□□ -1.78
INO80-205ENST00000558357 MT1GP13640 62 aa3.94□□□□□ -1.78
INO80-205ENST00000558357 MT1XP80297 61 aa3.93□□□□□ -1.78
INO80-205ENST00000558357 SPRR2DP22532 72 aa3.9□□□□□ -1.78
INO80-205ENST00000558357 LCE2BO14633 110 aa3.89□□□□□ -1.79
INO80-205ENST00000558357 RNF213Q63HN8 5207 aa3.87□□□□□ -1.79
INO80-205ENST00000558357 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
INO80-205ENST00000558357 UBR4Q5T4S7 5183 aa3.85□□□□□ -1.79
INO80-205ENST00000558357 MT1BP07438 61 aa3.85□□□□□ -1.79
INO80-205ENST00000558357 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
INO80-205ENST00000558357 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
INO80-205ENST00000558357 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
INO80-205ENST00000558357 LCE2CQ5TA81 110 aa3.79□□□□□ -1.8
INO80-205ENST00000558357 HMCN2Q8NDA2 5059 aa3.79□□□□□ -1.8
INO80-205ENST00000558357 MUC2Q02817 5179 aa3.78□□□□□ -1.8
INO80-205ENST00000558357 KRTAP4-8A0A0G2JLE6 195 aa3.77□□□□□ -1.81
INO80-205ENST00000558357 KRTAP4-8Q9BYQ9 185 aa3.77□□□□□ -1.81
INO80-205ENST00000558357 KRTAP9-8Q9BYQ0 159 aa3.77□□□□□ -1.81
INO80-205ENST00000558357 FSIP2Q5CZC0 6907 aa3.72□□□□□ -1.81
INO80-205ENST00000558357 KRTAP19-2Q3LHN2 52 aa3.72□□□□□ -1.81
INO80-205ENST00000558357 FAT4Q6V0I7 4981 aa3.72□□□□□ -1.81
INO80-205ENST00000558357 KRTAP9-3Q9BYQ3 159 aa3.7□□□□□ -1.82
INO80-205ENST00000558357 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
INO80-205ENST00000558357 MT1LQ93083 61 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms