RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 CRIPTQ9P021 101 aa3.05□□□□□ -1.92
GABPB1-207ENST00000558335 SRRM2Q9UQ35 2752 aaKnown RBP3.05□□□□□ -1.92
GABPB1-207ENST00000558335 KRTAP9-3Q9BYQ3 159 aa3.04□□□□□ -1.92
GABPB1-207ENST00000558335 DNAH7Q8WXX0 4024 aa3.04□□□□□ -1.92
GABPB1-207ENST00000558335 HECTD4Q9Y4D8 3996 aa3.03□□□□□ -1.92
GABPB1-207ENST00000558335 PRKDCP78527 4128 aaKnown RBP3.03□□□□□ -1.93
GABPB1-207ENST00000558335 DNAH8Q96JB1 4490 aa3.02□□□□□ -1.93
GABPB1-207ENST00000558335 CSMD3Q7Z407 3707 aa3.02□□□□□ -1.93
GABPB1-207ENST00000558335 DNAH2Q9P225 4427 aa3.01□□□□□ -1.93
GABPB1-207ENST00000558335 H0YAA0 97 aa3.01□□□□□ -1.93
GABPB1-207ENST00000558335 H1FX-AS1Q4G0G2 97 aa3.01□□□□□ -1.93
GABPB1-207ENST00000558335 MEGF8Q7Z7M0 2845 aa3□□□□□ -1.93
GABPB1-207ENST00000558335 STARD9Q9P2P6 4700 aa2.98□□□□□ -1.93
GABPB1-207ENST00000558335 RPL37P61927 97 aaKnown RBP2.97□□□□□ -1.93
GABPB1-207ENST00000558335 FBN3Q75N90 2809 aa2.95□□□□□ -1.94
GABPB1-207ENST00000558335 Q8N1X5 172 aa2.95□□□□□ -1.94
GABPB1-207ENST00000558335 TPRXLQ17RH7 258 aa2.94□□□□□ -1.94
GABPB1-207ENST00000558335 PLAC4Q8WY50 150 aa2.94□□□□□ -1.94
GABPB1-207ENST00000558335 KRTAP17-1Q9BYP8 105 aa2.94□□□□□ -1.94
GABPB1-207ENST00000558335 TGP01266 2768 aa2.93□□□□□ -1.94
GABPB1-207ENST00000558335 DNAH5Q8TE73 4624 aa2.93□□□□□ -1.94
GABPB1-207ENST00000558335 PRO2289Q9P1D8 64 aa2.92□□□□□ -1.94
GABPB1-207ENST00000558335 DNAH11Q96DT5 4516 aa2.91□□□□□ -1.94
GABPB1-207ENST00000558335 C9orf92A6NGG3 77 aa2.91□□□□□ -1.94
GABPB1-207ENST00000558335 A0A1B0GVY2 172 aa2.9□□□□□ -1.95
GABPB1-207ENST00000558335 KMT2AQ03164 3969 aa2.89□□□□□ -1.95
GABPB1-207ENST00000558335 FRAS1Q86XX4 4008 aa2.89□□□□□ -1.95
GABPB1-207ENST00000558335 PKD1P98161 4303 aa2.89□□□□□ -1.95
GABPB1-207ENST00000558335 KRTAP23-1A1A580 65 aa2.88□□□□□ -1.95
GABPB1-207ENST00000558335 SACSQ9NZJ4 4579 aa2.88□□□□□ -1.95
GABPB1-207ENST00000558335 SMR3BP02814 79 aaPredicted RBP2.87□□□□□ -1.95
GABPB1-207ENST00000558335 KRTAP10-4P60372 401 aaPredicted RBP2.86□□□□□ -1.95
GABPB1-207ENST00000558335 KRTAP5-3Q6L8H2 238 aa2.86□□□□□ -1.95
GABPB1-207ENST00000558335 S4R3F8 94 aa2.86□□□□□ -1.95
GABPB1-207ENST00000558335 LRP1BQ9NZR2 4599 aa2.86□□□□□ -1.95
GABPB1-207ENST00000558335 INE1O15225 51 aa2.85□□□□□ -1.95
GABPB1-207ENST00000558335 KRTAP3-1Q9BYR8 98 aa2.85□□□□□ -1.95
GABPB1-207ENST00000558335 KRTAP10-8P60410 259 aa2.84□□□□□ -1.95
GABPB1-207ENST00000558335 FAT2Q9NYQ8 4349 aa2.84□□□□□ -1.95
GABPB1-207ENST00000558335 VPS13BQ7Z7G8 4022 aa2.83□□□□□ -1.96
GABPB1-207ENST00000558335 M0QZ58 72 aa2.82□□□□□ -1.96
GABPB1-207ENST00000558335 PKHD1L1Q86WI1 4243 aa2.8□□□□□ -1.96
GABPB1-207ENST00000558335 APOBP04114 4563 aaKnown RBP2.8□□□□□ -1.96
GABPB1-207ENST00000558335 Q5VSD8 79 aa2.79□□□□□ -1.96
GABPB1-207ENST00000558335 PP632Q6XCG6 107 aa2.77□□□□□ -1.97
GABPB1-207ENST00000558335 R4GN34 69 aa2.77□□□□□ -1.97
GABPB1-207ENST00000558335 DYNC1H1Q14204 4646 aaKnown RBP2.76□□□□□ -1.97
GABPB1-207ENST00000558335 KRTAP10-6P60371 365 aaPredicted RBP2.76□□□□□ -1.97
GABPB1-207ENST00000558335 FLG2Q5D862 2391 aaPredicted RBP2.76□□□□□ -1.97
GABPB1-207ENST00000558335 PKHD1P08F94 4074 aa2.75□□□□□ -1.97
GABPB1-207ENST00000558335 C10orf95Q9H7T3 257 aa2.75□□□□□ -1.97
GABPB1-207ENST00000558335 KRTAP9-8Q9BYQ0 159 aa2.74□□□□□ -1.97
GABPB1-207ENST00000558335 A0A0D9SG42 100 aa2.71□□□□□ -1.98
GABPB1-207ENST00000558335 HYDINQ4G0P3 5121 aa2.71□□□□□ -1.98
GABPB1-207ENST00000558335 FAT3Q8TDW7 4589 aa2.7□□□□□ -1.98
GABPB1-207ENST00000558335 KRTAP12-2P59991 146 aa2.7□□□□□ -1.98
GABPB1-207ENST00000558335 DNHD1Q96M86 4753 aa2.7□□□□□ -1.98
GABPB1-207ENST00000558335 FAT1Q14517 4588 aa2.69□□□□□ -1.98
GABPB1-207ENST00000558335 TNXBP22105 4242 aa2.68□□□□□ -1.98
GABPB1-207ENST00000558335 KRTAP13-4Q3LI77 160 aa2.67□□□□□ -1.98
GABPB1-207ENST00000558335 MT1HL1P0DM35 61 aa2.66□□□□□ -1.98
GABPB1-207ENST00000558335 KRTAP12-1P59990 96 aa2.66□□□□□ -1.98
GABPB1-207ENST00000558335 HSPG2P98160 4391 aa2.66□□□□□ -1.98
GABPB1-207ENST00000558335 DMBT1Q9UGM3 2413 aaPredicted RBP2.64□□□□□ -1.99
GABPB1-207ENST00000558335 LRP1Q07954 4544 aaKnown RBP2.63□□□□□ -1.99
GABPB1-207ENST00000558335 RYR2Q92736 4967 aa2.61□□□□□ -1.99
GABPB1-207ENST00000558335 SPRR5A0A1B0GTR4 108 aa2.6□□□□□ -1.99
GABPB1-207ENST00000558335 RYR1P21817 5038 aa2.54□□□□□ -2
GABPB1-207ENST00000558335 MYCBP2O75592 4640 aa2.53□□□□□ -2
GABPB1-207ENST00000558335 TNP1P09430 55 aa2.5□□□□□ -2.01
GABPB1-207ENST00000558335 KMT2CQ8NEZ4 4911 aaKnown RBP2.46□□□□□ -2.01
GABPB1-207ENST00000558335 RYR3Q15413 4870 aa2.46□□□□□ -2.02
GABPB1-207ENST00000558335 MUC17Q685J3 4493 aa2.44□□□□□ -2.02
GABPB1-207ENST00000558335 LRP2P98164 4655 aa2.42□□□□□ -2.02
GABPB1-207ENST00000558335 KRTAP19-2Q3LHN2 52 aa2.4□□□□□ -2.03
GABPB1-207ENST00000558335 KIAA1109Q2LD37 5005 aa2.39□□□□□ -2.03
GABPB1-207ENST00000558335 KRTAP4-1Q9BYQ7 146 aa2.38□□□□□ -2.03
GABPB1-207ENST00000558335 SPRR2GQ9BYE4 73 aa2.37□□□□□ -2.03
GABPB1-207ENST00000558335 LPAP08519 4548 aa2.34□□□□□ -2.03
GABPB1-207ENST00000558335 M0R2T5 61 aa2.33□□□□□ -2.04
GABPB1-207ENST00000558335 HERC1Q15751 4861 aa2.32□□□□□ -2.04
GABPB1-207ENST00000558335 FLGP20930 4061 aaPredicted RBP2.32□□□□□ -2.04
GABPB1-207ENST00000558335 BIRC6Q9NR09 4857 aa2.3□□□□□ -2.04
GABPB1-207ENST00000558335 EPPK1P58107 5090 aaKnown RBP2.27□□□□□ -2.05
GABPB1-207ENST00000558335 KRTAP10-10P60014 251 aa2.26□□□□□ -2.05
GABPB1-207ENST00000558335 ABCA13Q86UQ4 5058 aa2.26□□□□□ -2.05
GABPB1-207ENST00000558335 KRTAP19-8Q3LI54 63 aa2.25□□□□□ -2.05
GABPB1-207ENST00000558335 HERC2O95714 4834 aa2.25□□□□□ -2.05
GABPB1-207ENST00000558335 KRTAP8-1Q8IUC2 63 aa2.24□□□□□ -2.05
GABPB1-207ENST00000558335 MT1HP80294 61 aa2.22□□□□□ -2.05
GABPB1-207ENST00000558335 LCE1AQ5T7P2 110 aa2.21□□□□□ -2.06
GABPB1-207ENST00000558335 MT2AP02795 61 aa2.2□□□□□ -2.06
GABPB1-207ENST00000558335 LCE3AQ5TA76 89 aa2.19□□□□□ -2.06
GABPB1-207ENST00000558335 KRTAP10-12P60413 245 aa2.18□□□□□ -2.06
GABPB1-207ENST00000558335 MT1FP04733 61 aa2.16□□□□□ -2.06
GABPB1-207ENST00000558335 KRTAP12-3P60328 96 aa2.16□□□□□ -2.06
GABPB1-207ENST00000558335 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
GABPB1-207ENST00000558335 HMCN2Q8NDA2 5059 aa2.13□□□□□ -2.07
GABPB1-207ENST00000558335 KRTAP10-5P60370 271 aa2.13□□□□□ -2.07
GABPB1-207ENST00000558335 KRTAP10-7P60409 375 aaPredicted RBP2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms