RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 NBPF19A0A087WUL8 3843 aa3.53□□□□□ -1.84
LINC00641-201ENST00000555379 PKD1L1Q8TDX9 2849 aa3.51□□□□□ -1.85
LINC00641-201ENST00000555379 SPRR2GQ9BYE4 73 aa3.51□□□□□ -1.85
LINC00641-201ENST00000555379 MT1HP80294 61 aa3.49□□□□□ -1.85
LINC00641-201ENST00000555379 DNAH11Q96DT5 4516 aa3.45□□□□□ -1.86
LINC00641-201ENST00000555379 ZNF469Q96JG9 3925 aaPredicted RBP3.45□□□□□ -1.86
LINC00641-201ENST00000555379 LORP23490 312 aaPredicted RBP3.44□□□□□ -1.86
LINC00641-201ENST00000555379 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
LINC00641-201ENST00000555379 MEGF8Q7Z7M0 2845 aa3.44□□□□□ -1.86
LINC00641-201ENST00000555379 MYCBP2O75592 4640 aa3.43□□□□□ -1.86
LINC00641-201ENST00000555379 FBN1P35555 2871 aaKnown RBP3.43□□□□□ -1.86
LINC00641-201ENST00000555379 MT2AP02795 61 aa3.42□□□□□ -1.86
LINC00641-201ENST00000555379 CUBNO60494 3623 aa3.42□□□□□ -1.86
LINC00641-201ENST00000555379 AKAP9Q99996 3911 aa3.4□□□□□ -1.87
LINC00641-201ENST00000555379 HERC1Q15751 4861 aa3.37□□□□□ -1.87
LINC00641-201ENST00000555379 DYNC1H1Q14204 4646 aaKnown RBP3.34□□□□□ -1.87
LINC00641-201ENST00000555379 SRRM2Q9UQ35 2752 aaKnown RBP3.33□□□□□ -1.88
LINC00641-201ENST00000555379 KRTAP19-8Q3LI54 63 aa3.33□□□□□ -1.88
LINC00641-201ENST00000555379 LRP1BQ9NZR2 4599 aa3.33□□□□□ -1.88
LINC00641-201ENST00000555379 KRTAP10-7P60409 375 aaPredicted RBP3.33□□□□□ -1.88
LINC00641-201ENST00000555379 KRTAP4-1Q9BYQ7 146 aa3.31□□□□□ -1.88
LINC00641-201ENST00000555379 DNAH9Q9NYC9 4486 aa3.3□□□□□ -1.88
LINC00641-201ENST00000555379 CRCT1Q9UGL9 99 aa3.29□□□□□ -1.88
LINC00641-201ENST00000555379 HSPG2P98160 4391 aa3.28□□□□□ -1.88
LINC00641-201ENST00000555379 KRTAP10-5P60370 271 aa3.27□□□□□ -1.89
LINC00641-201ENST00000555379 MT1FP04733 61 aa3.27□□□□□ -1.89
LINC00641-201ENST00000555379 PLECQ15149 4684 aaKnown RBP3.27□□□□□ -1.89
LINC00641-201ENST00000555379 DNAH6Q9C0G6 4158 aa3.24□□□□□ -1.89
LINC00641-201ENST00000555379 DNAH5Q8TE73 4624 aa3.23□□□□□ -1.89
LINC00641-201ENST00000555379 SPRR2FQ96RM1 72 aa3.22□□□□□ -1.89
LINC00641-201ENST00000555379 DNAH17Q9UFH2 4485 aa3.22□□□□□ -1.89
LINC00641-201ENST00000555379 VPS13DQ5THJ4 4388 aa3.22□□□□□ -1.89
LINC00641-201ENST00000555379 TRRAPQ9Y4A5 3859 aa3.19□□□□□ -1.9
LINC00641-201ENST00000555379 CMYA5Q8N3K9 4069 aa3.18□□□□□ -1.9
LINC00641-201ENST00000555379 DYNC2H1Q8NCM8 4307 aaKnown RBP3.17□□□□□ -1.9
LINC00641-201ENST00000555379 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
LINC00641-201ENST00000555379 DNAH8Q96JB1 4490 aa3.16□□□□□ -1.9
LINC00641-201ENST00000555379 COL7A1Q02388 2944 aa3.15□□□□□ -1.9
LINC00641-201ENST00000555379 ANK2Q01484 3957 aa3.14□□□□□ -1.91
LINC00641-201ENST00000555379 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
LINC00641-201ENST00000555379 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
LINC00641-201ENST00000555379 FAT2Q9NYQ8 4349 aa3.12□□□□□ -1.91
LINC00641-201ENST00000555379 LRP1Q07954 4544 aaKnown RBP3.12□□□□□ -1.91
LINC00641-201ENST00000555379 SPRR2EP22531 72 aa3.12□□□□□ -1.91
LINC00641-201ENST00000555379 SPRR2BP35325 72 aa3.12□□□□□ -1.91
LINC00641-201ENST00000555379 SPRR2AP35326 72 aa3.12□□□□□ -1.91
LINC00641-201ENST00000555379 DNAH3Q8TD57 4116 aa3.11□□□□□ -1.91
LINC00641-201ENST00000555379 SACSQ9NZJ4 4579 aa3.1□□□□□ -1.91
LINC00641-201ENST00000555379 MT1GP13640 62 aa3.09□□□□□ -1.92
LINC00641-201ENST00000555379 KRTAP19-1Q8IUB9 90 aa3.08□□□□□ -1.92
LINC00641-201ENST00000555379 APOBP04114 4563 aaKnown RBP3.08□□□□□ -1.92
LINC00641-201ENST00000555379 MT3P25713 68 aa3.07□□□□□ -1.92
LINC00641-201ENST00000555379 KRTAP12-4P60329 112 aa3.06□□□□□ -1.92
LINC00641-201ENST00000555379 SPRR2DP22532 72 aa3.06□□□□□ -1.92
LINC00641-201ENST00000555379 RYR2Q92736 4967 aa3.05□□□□□ -1.92
LINC00641-201ENST00000555379 KRTAP9-8Q9BYQ0 159 aa3.03□□□□□ -1.92
LINC00641-201ENST00000555379 BIRC6Q9NR09 4857 aa3.03□□□□□ -1.92
LINC00641-201ENST00000555379 KRTAP9-3Q9BYQ3 159 aa3.02□□□□□ -1.93
LINC00641-201ENST00000555379 MT1BP07438 61 aa3.01□□□□□ -1.93
LINC00641-201ENST00000555379 RYR1P21817 5038 aa3.01□□□□□ -1.93
LINC00641-201ENST00000555379 FAT1Q14517 4588 aa3.01□□□□□ -1.93
LINC00641-201ENST00000555379 MT1XP80297 61 aa3.01□□□□□ -1.93
LINC00641-201ENST00000555379 LYSTQ99698 3801 aa3□□□□□ -1.93
LINC00641-201ENST00000555379 FAT3Q8TDW7 4589 aa2.98□□□□□ -1.93
LINC00641-201ENST00000555379 DNHD1Q96M86 4753 aa2.97□□□□□ -1.93
LINC00641-201ENST00000555379 CSMD3Q7Z407 3707 aa2.96□□□□□ -1.94
LINC00641-201ENST00000555379 DNAH7Q8WXX0 4024 aa2.94□□□□□ -1.94
LINC00641-201ENST00000555379 KRTAP19-6Q3LI70 58 aa2.94□□□□□ -1.94
LINC00641-201ENST00000555379 PKHD1L1Q86WI1 4243 aa2.93□□□□□ -1.94
LINC00641-201ENST00000555379 PRKDCP78527 4128 aaKnown RBP2.93□□□□□ -1.94
LINC00641-201ENST00000555379 FRAS1Q86XX4 4008 aa2.93□□□□□ -1.94
LINC00641-201ENST00000555379 RYR3Q15413 4870 aa2.92□□□□□ -1.94
LINC00641-201ENST00000555379 KRTAP19-3Q7Z4W3 81 aa2.9□□□□□ -1.95
LINC00641-201ENST00000555379 PCLOQ9Y6V0 5065 aa2.89□□□□□ -1.95
LINC00641-201ENST00000555379 MT1LQ93083 61 aa2.88□□□□□ -1.95
LINC00641-201ENST00000555379 VPS13BQ7Z7G8 4022 aa2.88□□□□□ -1.95
LINC00641-201ENST00000555379 STARD9Q9P2P6 4700 aa2.87□□□□□ -1.95
LINC00641-201ENST00000555379 KMT2AQ03164 3969 aa2.85□□□□□ -1.95
LINC00641-201ENST00000555379 KRTAP17-1Q9BYP8 105 aa2.83□□□□□ -1.96
LINC00641-201ENST00000555379 HERC2O95714 4834 aa2.83□□□□□ -1.96
LINC00641-201ENST00000555379 PKD1P98161 4303 aa2.82□□□□□ -1.96
LINC00641-201ENST00000555379 LRP2P98164 4655 aa2.81□□□□□ -1.96
LINC00641-201ENST00000555379 KRTAP19-2Q3LHN2 52 aa2.81□□□□□ -1.96
LINC00641-201ENST00000555379 MT1EP04732 61 aa2.8□□□□□ -1.96
LINC00641-201ENST00000555379 KMT2CQ8NEZ4 4911 aaKnown RBP2.8□□□□□ -1.96
LINC00641-201ENST00000555379 KRTAP9-2Q9BYQ4 174 aa2.79□□□□□ -1.96
LINC00641-201ENST00000555379 HECTD4Q9Y4D8 3996 aa2.78□□□□□ -1.96
LINC00641-201ENST00000555379 LCE1AQ5T7P2 110 aa2.78□□□□□ -1.96
LINC00641-201ENST00000555379 KRTAP9-6A0A140TA67 174 aa2.77□□□□□ -1.97
LINC00641-201ENST00000555379 HYDINQ4G0P3 5121 aa2.77□□□□□ -1.97
LINC00641-201ENST00000555379 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
LINC00641-201ENST00000555379 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
LINC00641-201ENST00000555379 MUC17Q685J3 4493 aa2.74□□□□□ -1.97
LINC00641-201ENST00000555379 LCE3BQ5TA77 95 aa2.73□□□□□ -1.97
LINC00641-201ENST00000555379 KRTAP6-3Q3LI67 103 aa2.72□□□□□ -1.97
LINC00641-201ENST00000555379 MT1MQ8N339 61 aa2.71□□□□□ -1.98
LINC00641-201ENST00000555379 LCE5AQ5TCM9 118 aa2.71□□□□□ -1.98
LINC00641-201ENST00000555379 KIAA1109Q2LD37 5005 aa2.69□□□□□ -1.98
LINC00641-201ENST00000555379 PKHD1P08F94 4074 aa2.67□□□□□ -1.98
LINC00641-201ENST00000555379 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms