RNA–Protein interactions for RNA: ENST00000551765.5

GATC-203, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GATC, Length 4,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-203ENST00000551765 KRTAP10-6P60371 365 aaPredicted RBP6.54□□□□□ -1.36
GATC-203ENST00000551765 MT1HL1P0DM35 61 aa6.52□□□□□ -1.37
GATC-203ENST00000551765 DNAH7Q8WXX0 4024 aa6.51□□□□□ -1.37
GATC-203ENST00000551765 FRAS1Q86XX4 4008 aa6.5□□□□□ -1.37
GATC-203ENST00000551765 MYCBP2O75592 4640 aa6.5□□□□□ -1.37
GATC-203ENST00000551765 KRTAP4-5Q9BYR2 181 aa6.5□□□□□ -1.37
GATC-203ENST00000551765 DNAH17Q9UFH2 4485 aa6.49□□□□□ -1.37
GATC-203ENST00000551765 DNAH2Q9P225 4427 aa6.48□□□□□ -1.37
GATC-203ENST00000551765 TNP1P09430 55 aa6.46□□□□□ -1.37
GATC-203ENST00000551765 DYNC1H1Q14204 4646 aaKnown RBP6.46□□□□□ -1.37
GATC-203ENST00000551765 KRTAP12-1P59990 96 aa6.46□□□□□ -1.38
GATC-203ENST00000551765 KRTAP3-3Q9BYR6 98 aa6.44□□□□□ -1.38
GATC-203ENST00000551765 CMYA5Q8N3K9 4069 aa6.43□□□□□ -1.38
GATC-203ENST00000551765 DNAH6Q9C0G6 4158 aa6.41□□□□□ -1.38
GATC-203ENST00000551765 VPS13BQ7Z7G8 4022 aa6.38□□□□□ -1.39
GATC-203ENST00000551765 A0A0A0MQY5 61 aa6.38□□□□□ -1.39
GATC-203ENST00000551765 KRTAP3-2Q9BYR7 98 aa6.38□□□□□ -1.39
GATC-203ENST00000551765 KRTAP10-10P60014 251 aa6.37□□□□□ -1.39
GATC-203ENST00000551765 DNAH3Q8TD57 4116 aa6.37□□□□□ -1.39
GATC-203ENST00000551765 RYR1P21817 5038 aa6.37□□□□□ -1.39
GATC-203ENST00000551765 KIAA1109Q2LD37 5005 aa6.36□□□□□ -1.39
GATC-203ENST00000551765 FAT3Q8TDW7 4589 aa6.33□□□□□ -1.4
GATC-203ENST00000551765 LRP1Q07954 4544 aaKnown RBP6.29□□□□□ -1.4
GATC-203ENST00000551765 SACSQ9NZJ4 4579 aa6.29□□□□□ -1.4
GATC-203ENST00000551765 DYNC2H1Q8NCM8 4307 aaKnown RBP6.27□□□□□ -1.41
GATC-203ENST00000551765 HYDINQ4G0P3 5121 aa6.26□□□□□ -1.41
GATC-203ENST00000551765 HECTD4Q9Y4D8 3996 aa6.26□□□□□ -1.41
GATC-203ENST00000551765 ALMS1Q8TCU4 4167 aa6.25□□□□□ -1.41
GATC-203ENST00000551765 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
GATC-203ENST00000551765 PKHD1P08F94 4074 aa6.21□□□□□ -1.42
GATC-203ENST00000551765 APOBP04114 4563 aaKnown RBP6.19□□□□□ -1.42
GATC-203ENST00000551765 RYR3Q15413 4870 aa6.18□□□□□ -1.42
GATC-203ENST00000551765 FAT2Q9NYQ8 4349 aa6.15□□□□□ -1.42
GATC-203ENST00000551765 LORP23490 312 aaPredicted RBP6.15□□□□□ -1.43
GATC-203ENST00000551765 KRTAP17-1Q9BYP8 105 aa6.07□□□□□ -1.44
GATC-203ENST00000551765 KRTAP4-1Q9BYQ7 146 aa6.02□□□□□ -1.45
GATC-203ENST00000551765 LRP2P98164 4655 aa6.02□□□□□ -1.45
GATC-203ENST00000551765 KMT2CQ8NEZ4 4911 aaKnown RBP6.01□□□□□ -1.45
GATC-203ENST00000551765 RYR2Q92736 4967 aa5.92□□□□□ -1.46
GATC-203ENST00000551765 KRTAP15-1Q3LI76 137 aa5.88□□□□□ -1.47
GATC-203ENST00000551765 PRO2289Q9P1D8 64 aa5.88□□□□□ -1.47
GATC-203ENST00000551765 PKD1P98161 4303 aa5.82□□□□□ -1.48
GATC-203ENST00000551765 HERC2O95714 4834 aa5.81□□□□□ -1.48
GATC-203ENST00000551765 LPAP08519 4548 aa5.76□□□□□ -1.49
GATC-203ENST00000551765 HSPG2P98160 4391 aa5.75□□□□□ -1.49
GATC-203ENST00000551765 LCE2DQ5TA82 110 aaPredicted RBP5.74□□□□□ -1.49
GATC-203ENST00000551765 EPPK1P58107 5090 aaKnown RBP5.65□□□□□ -1.51
GATC-203ENST00000551765 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
GATC-203ENST00000551765 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
GATC-203ENST00000551765 MT1HP80294 61 aa5.55□□□□□ -1.52
GATC-203ENST00000551765 PKHD1L1Q86WI1 4243 aa5.53□□□□□ -1.52
GATC-203ENST00000551765 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
GATC-203ENST00000551765 ABCA13Q86UQ4 5058 aa5.5□□□□□ -1.53
GATC-203ENST00000551765 PCLOQ9Y6V0 5065 aa5.5□□□□□ -1.53
GATC-203ENST00000551765 MT2AP02795 61 aa5.5□□□□□ -1.53
GATC-203ENST00000551765 MT1FP04733 61 aa5.48□□□□□ -1.53
GATC-203ENST00000551765 MUC2Q02817 5179 aa5.48□□□□□ -1.53
GATC-203ENST00000551765 TNXBP22105 4242 aa5.46□□□□□ -1.54
GATC-203ENST00000551765 SPRR2GQ9BYE4 73 aa5.4□□□□□ -1.54
GATC-203ENST00000551765 CRCT1Q9UGL9 99 aa5.37□□□□□ -1.55
GATC-203ENST00000551765 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
GATC-203ENST00000551765 BIRC6Q9NR09 4857 aa5.35□□□□□ -1.55
GATC-203ENST00000551765 KRTAP19-1Q8IUB9 90 aa5.35□□□□□ -1.55
GATC-203ENST00000551765 HERC1Q15751 4861 aa5.34□□□□□ -1.55
GATC-203ENST00000551765 KRTAP23-1A1A580 65 aa5.33□□□□□ -1.56
GATC-203ENST00000551765 FAT4Q6V0I7 4981 aa5.31□□□□□ -1.56
GATC-203ENST00000551765 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
GATC-203ENST00000551765 LCE2CQ5TA81 110 aa5.24□□□□□ -1.57
GATC-203ENST00000551765 UBR4Q5T4S7 5183 aa5.2□□□□□ -1.58
GATC-203ENST00000551765 KRTAP19-2Q3LHN2 52 aa5.19□□□□□ -1.58
GATC-203ENST00000551765 MUC17Q685J3 4493 aa5.19□□□□□ -1.58
GATC-203ENST00000551765 KRTAP10-7P60409 375 aaPredicted RBP5.16□□□□□ -1.58
GATC-203ENST00000551765 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.59
GATC-203ENST00000551765 KRTAP19-5Q3LI72 72 aa5.11□□□□□ -1.59
GATC-203ENST00000551765 FLGP20930 4061 aaPredicted RBP5.11□□□□□ -1.59
GATC-203ENST00000551765 KRTAP8-1Q8IUC2 63 aa5.1□□□□□ -1.59
GATC-203ENST00000551765 MT1BP07438 61 aa5.08□□□□□ -1.6
GATC-203ENST00000551765 MT1XP80297 61 aa5.08□□□□□ -1.6
GATC-203ENST00000551765 KRTAP19-8Q3LI54 63 aa5.05□□□□□ -1.6
GATC-203ENST00000551765 LCE2BO14633 110 aa5.05□□□□□ -1.6
GATC-203ENST00000551765 KRTAP10-5P60370 271 aa5.05□□□□□ -1.6
GATC-203ENST00000551765 INE1O15225 51 aa5.03□□□□□ -1.6
GATC-203ENST00000551765 HMCN2Q8NDA2 5059 aa5□□□□□ -1.61
GATC-203ENST00000551765 KRTAP4-8A0A0G2JLE6 195 aa5□□□□□ -1.61
GATC-203ENST00000551765 KRTAP4-8Q9BYQ9 185 aa5□□□□□ -1.61
GATC-203ENST00000551765 KRTAP9-3Q9BYQ3 159 aa4.95□□□□□ -1.62
GATC-203ENST00000551765 LCE2AQ5TA79 106 aaPredicted RBP4.94□□□□□ -1.62
GATC-203ENST00000551765 LCE3CQ5T5A8 94 aa4.92□□□□□ -1.62
GATC-203ENST00000551765 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
GATC-203ENST00000551765 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
GATC-203ENST00000551765 SYNE1Q8NF91 8797 aaKnown RBP4.8□□□□□ -1.64
GATC-203ENST00000551765 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
GATC-203ENST00000551765 KRTAP4-7Q9BYR0 210 aa4.77□□□□□ -1.65
GATC-203ENST00000551765 USH2AO75445 5202 aa4.77□□□□□ -1.65
GATC-203ENST00000551765 KMT2DO14686 5537 aa4.64□□□□□ -1.67
GATC-203ENST00000551765 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
GATC-203ENST00000551765 MT1GP13640 62 aa4.63□□□□□ -1.67
GATC-203ENST00000551765 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
GATC-203ENST00000551765 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
GATC-203ENST00000551765 MT1LQ93083 61 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms