RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 FAT2Q9NYQ8 4349 aa2.47□□□□□ -2.01
CCDC59-204ENST00000550589 A6NED7 52 aa2.47□□□□□ -2.01
CCDC59-204ENST00000550589 HRES1P13985 223 aa2.47□□□□□ -2.01
CCDC59-204ENST00000550589 Q5VV11 94 aa2.47□□□□□ -2.01
CCDC59-204ENST00000550589 PRR26Q8N8Z3 221 aa2.47□□□□□ -2.01
CCDC59-204ENST00000550589 DMAC1Q96GE9 116 aa2.47□□□□□ -2.01
CCDC59-204ENST00000550589 C7orf65Q6ZTY9 151 aa2.45□□□□□ -2.02
CCDC59-204ENST00000550589 KRTAP16-1A8MUX0 517 aa2.45□□□□□ -2.02
CCDC59-204ENST00000550589 SPTSSBQ8NFR3 76 aa2.45□□□□□ -2.02
CCDC59-204ENST00000550589 ATP11AUNQ6ZP68 121 aa2.44□□□□□ -2.02
CCDC59-204ENST00000550589 RETNLBQ9BQ08 111 aa2.44□□□□□ -2.02
CCDC59-204ENST00000550589 CDC42SE1Q9NRR8 79 aa2.44□□□□□ -2.02
CCDC59-204ENST00000550589 VPS13BQ7Z7G8 4022 aa2.43□□□□□ -2.02
CCDC59-204ENST00000550589 A0A1B0GU69 56 aa2.43□□□□□ -2.02
CCDC59-204ENST00000550589 SMR3BP02814 79 aaPredicted RBP2.43□□□□□ -2.02
CCDC59-204ENST00000550589 SEC61GP60059 68 aa2.43□□□□□ -2.02
CCDC59-204ENST00000550589 PKD1P98161 4303 aa2.43□□□□□ -2.02
CCDC59-204ENST00000550589 A0A1B0GVY2 172 aa2.42□□□□□ -2.02
CCDC59-204ENST00000550589 PMAIP1Q13794 54 aa2.42□□□□□ -2.02
CCDC59-204ENST00000550589 SACSQ9NZJ4 4579 aa2.41□□□□□ -2.02
CCDC59-204ENST00000550589 C20orf166-AS1Q96NR2 134 aa2.41□□□□□ -2.02
CCDC59-204ENST00000550589 A8MUU9 505 aa2.4□□□□□ -2.03
CCDC59-204ENST00000550589 UQCR11O14957 56 aa2.4□□□□□ -2.03
CCDC59-204ENST00000550589 HYDINQ4G0P3 5121 aa2.39□□□□□ -2.03
CCDC59-204ENST00000550589 C9orf92A6NGG3 77 aa2.38□□□□□ -2.03
CCDC59-204ENST00000550589 LCA10Q71F78 164 aa2.38□□□□□ -2.03
CCDC59-204ENST00000550589 DYNC1H1Q14204 4646 aaKnown RBP2.37□□□□□ -2.03
CCDC59-204ENST00000550589 KRTAP10-4P60372 401 aaPredicted RBP2.36□□□□□ -2.03
CCDC59-204ENST00000550589 PKHD1P08F94 4074 aa2.36□□□□□ -2.03
CCDC59-204ENST00000550589 FAT1Q14517 4588 aa2.36□□□□□ -2.03
CCDC59-204ENST00000550589 SPINK7P58062 85 aa2.36□□□□□ -2.03
CCDC59-204ENST00000550589 MIR22HGQ0VDD5 57 aa2.36□□□□□ -2.03
CCDC59-204ENST00000550589 KTN1-AS1Q86SY8 53 aa2.36□□□□□ -2.03
CCDC59-204ENST00000550589 Q5VSD8 79 aa2.35□□□□□ -2.03
CCDC59-204ENST00000550589 SPATA8Q6RVD6 105 aa2.35□□□□□ -2.03
CCDC59-204ENST00000550589 APOBP04114 4563 aaKnown RBP2.35□□□□□ -2.03
CCDC59-204ENST00000550589 KRTAP10-8P60410 259 aa2.33□□□□□ -2.04
CCDC59-204ENST00000550589 COX6B2Q6YFQ2 88 aa2.33□□□□□ -2.04
CCDC59-204ENST00000550589 PKHD1L1Q86WI1 4243 aa2.32□□□□□ -2.04
CCDC59-204ENST00000550589 A6NN06 94 aa2.32□□□□□ -2.04
CCDC59-204ENST00000550589 A8MU10 97 aa2.32□□□□□ -2.04
CCDC59-204ENST00000550589 K7ERS5 55 aa2.31□□□□□ -2.04
CCDC59-204ENST00000550589 RPL37P61927 97 aaKnown RBP2.31□□□□□ -2.04
CCDC59-204ENST00000550589 A0A1B0GU33 70 aa2.3□□□□□ -2.04
CCDC59-204ENST00000550589 MT3P25713 68 aa2.28□□□□□ -2.04
CCDC59-204ENST00000550589 RYR2Q92736 4967 aa2.27□□□□□ -2.05
CCDC59-204ENST00000550589 FAT3Q8TDW7 4589 aa2.27□□□□□ -2.05
CCDC59-204ENST00000550589 KMT2CQ8NEZ4 4911 aaKnown RBP2.27□□□□□ -2.05
CCDC59-204ENST00000550589 FLG2Q5D862 2391 aaPredicted RBP2.26□□□□□ -2.05
CCDC59-204ENST00000550589 TPRXLQ17RH7 258 aa2.26□□□□□ -2.05
CCDC59-204ENST00000550589 H1FX-AS1Q4G0G2 97 aa2.26□□□□□ -2.05
CCDC59-204ENST00000550589 RBM12B-AS1Q9P1G2 102 aa2.26□□□□□ -2.05
CCDC59-204ENST00000550589 S4R3F8 94 aa2.26□□□□□ -2.05
CCDC59-204ENST00000550589 TNXBP22105 4242 aa2.25□□□□□ -2.05
CCDC59-204ENST00000550589 HSPG2P98160 4391 aa2.25□□□□□ -2.05
CCDC59-204ENST00000550589 DMBT1Q9UGM3 2413 aaPredicted RBP2.24□□□□□ -2.05
CCDC59-204ENST00000550589 LRP1Q07954 4544 aaKnown RBP2.23□□□□□ -2.05
CCDC59-204ENST00000550589 MT1HL1P0DM35 61 aa2.23□□□□□ -2.05
CCDC59-204ENST00000550589 H0YAA0 97 aa2.22□□□□□ -2.05
CCDC59-204ENST00000550589 CSAG1Q6PB30 78 aa2.22□□□□□ -2.05
CCDC59-204ENST00000550589 SEC61BP60468 96 aaKnown RBP2.21□□□□□ -2.06
CCDC59-204ENST00000550589 KRTAP9-6A8MVA2 160 aa2.2□□□□□ -2.06
CCDC59-204ENST00000550589 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
CCDC59-204ENST00000550589 RYR3Q15413 4870 aa2.2□□□□□ -2.06
CCDC59-204ENST00000550589 RYR1P21817 5038 aa2.2□□□□□ -2.06
CCDC59-204ENST00000550589 MYCBP2O75592 4640 aa2.19□□□□□ -2.06
CCDC59-204ENST00000550589 M0QZ58 72 aa2.18□□□□□ -2.06
CCDC59-204ENST00000550589 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
CCDC59-204ENST00000550589 LINC01554Q52M75 96 aa2.17□□□□□ -2.06
CCDC59-204ENST00000550589 PRAC1Q96KF2 57 aa2.17□□□□□ -2.06
CCDC59-204ENST00000550589 ROMO1P60602 79 aa2.16□□□□□ -2.06
CCDC59-204ENST00000550589 ADM2Q7Z4H4 148 aa2.16□□□□□ -2.06
CCDC59-204ENST00000550589 KIAA1109Q2LD37 5005 aa2.15□□□□□ -2.07
CCDC59-204ENST00000550589 A0A0D9SG42 100 aa2.14□□□□□ -2.07
CCDC59-204ENST00000550589 KRTAP10-5P60370 271 aa2.14□□□□□ -2.07
CCDC59-204ENST00000550589 KRTAP10-12P60413 245 aa2.14□□□□□ -2.07
CCDC59-204ENST00000550589 KRTAP25-1Q3LHN0 102 aa2.14□□□□□ -2.07
CCDC59-204ENST00000550589 P0C880 135 aa2.12□□□□□ -2.07
CCDC59-204ENST00000550589 CRIPTQ9P021 101 aa2.12□□□□□ -2.07
CCDC59-204ENST00000550589 R4GN34 69 aa2.12□□□□□ -2.07
CCDC59-204ENST00000550589 SPINT4Q6UDR6 99 aa2.11□□□□□ -2.07
CCDC59-204ENST00000550589 LPAP08519 4548 aa2.11□□□□□ -2.07
CCDC59-204ENST00000550589 LRP2P98164 4655 aa2.11□□□□□ -2.07
CCDC59-204ENST00000550589 KRTAP13-4Q3LI77 160 aa2.1□□□□□ -2.07
CCDC59-204ENST00000550589 EPPK1P58107 5090 aaKnown RBP2.09□□□□□ -2.07
CCDC59-204ENST00000550589 KRTAP12-1P59990 96 aa2.07□□□□□ -2.08
CCDC59-204ENST00000550589 KRTAP12-2P59991 146 aa2.06□□□□□ -2.08
CCDC59-204ENST00000550589 LCE3CQ5T5A8 94 aa2.06□□□□□ -2.08
CCDC59-204ENST00000550589 HERC2O95714 4834 aa2.04□□□□□ -2.08
CCDC59-204ENST00000550589 MUC17Q685J3 4493 aa2.03□□□□□ -2.08
CCDC59-204ENST00000550589 ABCA13Q86UQ4 5058 aa2.02□□□□□ -2.09
CCDC59-204ENST00000550589 CAMK2N1Q7Z7J9 78 aa2.01□□□□□ -2.09
CCDC59-204ENST00000550589 KRTAP4-1Q9BYQ7 146 aa2□□□□□ -2.09
CCDC59-204ENST00000550589 PP632Q6XCG6 107 aa1.99□□□□□ -2.09
CCDC59-204ENST00000550589 BIRC6Q9NR09 4857 aa1.97□□□□□ -2.09
CCDC59-204ENST00000550589 KRTAP19-2Q3LHN2 52 aa1.97□□□□□ -2.09
CCDC59-204ENST00000550589 C10orf95Q9H7T3 257 aa1.97□□□□□ -2.09
CCDC59-204ENST00000550589 M0R2T5 61 aa1.96□□□□□ -2.1
CCDC59-204ENST00000550589 PLAC4Q8WY50 150 aa1.94□□□□□ -2.1
CCDC59-204ENST00000550589 NDUFAF8A1L188 74 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms