RNA–Protein interactions for RNA: ENST00000549919.1

TMTC2-204, Transcript of transmembrane and tetratricopeptide repeat containing 2, humanhuman

TSL 1 (best) BASIC

Gene TMTC2, Length 6,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC2-204ENST00000549919 KRTAP8-1Q8IUC2 63 aa2.77□□□□□ -1.97
TMTC2-204ENST00000549919 DNAH17Q9UFH2 4485 aa2.76□□□□□ -1.97
TMTC2-204ENST00000549919 VPS13DQ5THJ4 4388 aa2.76□□□□□ -1.97
TMTC2-204ENST00000549919 KRTAP19-5Q3LI72 72 aa2.75□□□□□ -1.97
TMTC2-204ENST00000549919 TENM1Q9UKZ4 2725 aa2.75□□□□□ -1.97
TMTC2-204ENST00000549919 COL7A1Q02388 2944 aa2.75□□□□□ -1.97
TMTC2-204ENST00000549919 SPRR2GQ9BYE4 73 aa2.75□□□□□ -1.97
TMTC2-204ENST00000549919 MEGF8Q7Z7M0 2845 aa2.74□□□□□ -1.97
TMTC2-204ENST00000549919 PDZD2O15018 2839 aa2.73□□□□□ -1.97
TMTC2-204ENST00000549919 DNAH9Q9NYC9 4486 aa2.73□□□□□ -1.97
TMTC2-204ENST00000549919 TRRAPQ9Y4A5 3859 aa2.72□□□□□ -1.97
TMTC2-204ENST00000549919 MUC3AQ02505 3323 aa2.72□□□□□ -1.97
TMTC2-204ENST00000549919 DYNC2H1Q8NCM8 4307 aaKnown RBP2.71□□□□□ -1.98
TMTC2-204ENST00000549919 KRTAP19-4Q3LI73 84 aa2.7□□□□□ -1.98
TMTC2-204ENST00000549919 FRAS1Q86XX4 4008 aa2.69□□□□□ -1.98
TMTC2-204ENST00000549919 PKD1L1Q8TDX9 2849 aa2.68□□□□□ -1.98
TMTC2-204ENST00000549919 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
TMTC2-204ENST00000549919 CUBNO60494 3623 aa2.68□□□□□ -1.98
TMTC2-204ENST00000549919 ANK2Q01484 3957 aa2.67□□□□□ -1.98
TMTC2-204ENST00000549919 FBN3Q75N90 2809 aa2.67□□□□□ -1.98
TMTC2-204ENST00000549919 KRTAP4-1Q9BYQ7 146 aa2.66□□□□□ -1.98
TMTC2-204ENST00000549919 DNAH7Q8WXX0 4024 aa2.64□□□□□ -1.99
TMTC2-204ENST00000549919 CSMD3Q7Z407 3707 aa2.63□□□□□ -1.99
TMTC2-204ENST00000549919 SACSQ9NZJ4 4579 aa2.62□□□□□ -1.99
TMTC2-204ENST00000549919 DNAH5Q8TE73 4624 aa2.59□□□□□ -2
TMTC2-204ENST00000549919 MT2AP02795 61 aa2.58□□□□□ -2
TMTC2-204ENST00000549919 MT1HP80294 61 aa2.57□□□□□ -2
TMTC2-204ENST00000549919 KRTAP10-7P60409 375 aaPredicted RBP2.57□□□□□ -2
TMTC2-204ENST00000549919 VWFP04275 2813 aa2.57□□□□□ -2
TMTC2-204ENST00000549919 PLECQ15149 4684 aaKnown RBP2.56□□□□□ -2
TMTC2-204ENST00000549919 KRTAP4-5Q9BYR2 181 aa2.56□□□□□ -2
TMTC2-204ENST00000549919 LYSTQ99698 3801 aa2.56□□□□□ -2
TMTC2-204ENST00000549919 FBN1P35555 2871 aaKnown RBP2.55□□□□□ -2
TMTC2-204ENST00000549919 CSMD2Q7Z408 3487 aa2.54□□□□□ -2
TMTC2-204ENST00000549919 LCE3BQ5TA77 95 aa2.54□□□□□ -2
TMTC2-204ENST00000549919 MT1FP04733 61 aa2.54□□□□□ -2
TMTC2-204ENST00000549919 PRKDCP78527 4128 aaKnown RBP2.54□□□□□ -2
TMTC2-204ENST00000549919 HECTD4Q9Y4D8 3996 aa2.54□□□□□ -2
TMTC2-204ENST00000549919 OTOGQ6ZRI0 2925 aa2.53□□□□□ -2
TMTC2-204ENST00000549919 APOBP04114 4563 aaKnown RBP2.53□□□□□ -2.01
TMTC2-204ENST00000549919 DYNC1H1Q14204 4646 aaKnown RBP2.53□□□□□ -2.01
TMTC2-204ENST00000549919 VPS13BQ7Z7G8 4022 aa2.52□□□□□ -2.01
TMTC2-204ENST00000549919 FAT2Q9NYQ8 4349 aa2.52□□□□□ -2.01
TMTC2-204ENST00000549919 MT1XP80297 61 aa2.49□□□□□ -2.01
TMTC2-204ENST00000549919 KRTAP19-8Q3LI54 63 aa2.49□□□□□ -2.01
TMTC2-204ENST00000549919 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
TMTC2-204ENST00000549919 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
TMTC2-204ENST00000549919 KRTAP19-1Q8IUB9 90 aa2.46□□□□□ -2.01
TMTC2-204ENST00000549919 MT1GP13640 62 aa2.46□□□□□ -2.02
TMTC2-204ENST00000549919 PRM1P04553 51 aa2.44□□□□□ -2.02
TMTC2-204ENST00000549919 STARD9Q9P2P6 4700 aa2.44□□□□□ -2.02
TMTC2-204ENST00000549919 PKHD1L1Q86WI1 4243 aa2.42□□□□□ -2.02
TMTC2-204ENST00000549919 FAT1Q14517 4588 aa2.42□□□□□ -2.02
TMTC2-204ENST00000549919 HSPG2P98160 4391 aa2.42□□□□□ -2.02
TMTC2-204ENST00000549919 LRP1BQ9NZR2 4599 aa2.41□□□□□ -2.02
TMTC2-204ENST00000549919 PKD1P98161 4303 aa2.41□□□□□ -2.02
TMTC2-204ENST00000549919 FAT3Q8TDW7 4589 aa2.4□□□□□ -2.03
TMTC2-204ENST00000549919 ZNF469Q96JG9 3925 aaPredicted RBP2.39□□□□□ -2.03
TMTC2-204ENST00000549919 KMT2AQ03164 3969 aa2.39□□□□□ -2.03
TMTC2-204ENST00000549919 MT1BP07438 61 aa2.37□□□□□ -2.03
TMTC2-204ENST00000549919 SPRR2FQ96RM1 72 aa2.37□□□□□ -2.03
TMTC2-204ENST00000549919 LCE2DQ5TA82 110 aaPredicted RBP2.34□□□□□ -2.04
TMTC2-204ENST00000549919 LRP1Q07954 4544 aaKnown RBP2.34□□□□□ -2.04
TMTC2-204ENST00000549919 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
TMTC2-204ENST00000549919 KRTAP2-4Q9BYR9 128 aa2.33□□□□□ -2.04
TMTC2-204ENST00000549919 KRTAP2-1Q9BYU5 128 aa2.33□□□□□ -2.04
TMTC2-204ENST00000549919 PKHD1P08F94 4074 aa2.32□□□□□ -2.04
TMTC2-204ENST00000549919 MT1LQ93083 61 aa2.3□□□□□ -2.04
TMTC2-204ENST00000549919 KRTAP4-7Q9BYR0 210 aa2.3□□□□□ -2.04
TMTC2-204ENST00000549919 KRTAP4-8A0A0G2JLE6 195 aa2.29□□□□□ -2.04
TMTC2-204ENST00000549919 KRTAP4-8Q9BYQ9 185 aa2.29□□□□□ -2.04
TMTC2-204ENST00000549919 TNXBP22105 4242 aa2.28□□□□□ -2.05
TMTC2-204ENST00000549919 MT3P25713 68 aa2.27□□□□□ -2.05
TMTC2-204ENST00000549919 MT1EP04732 61 aa2.27□□□□□ -2.05
TMTC2-204ENST00000549919 MYCBP2O75592 4640 aa2.27□□□□□ -2.05
TMTC2-204ENST00000549919 FLGP20930 4061 aaPredicted RBP2.25□□□□□ -2.05
TMTC2-204ENST00000549919 MUC17Q685J3 4493 aa2.24□□□□□ -2.05
TMTC2-204ENST00000549919 KRTAP9-8Q9BYQ0 159 aa2.23□□□□□ -2.05
TMTC2-204ENST00000549919 HERC1Q15751 4861 aa2.22□□□□□ -2.05
TMTC2-204ENST00000549919 LOC100996750A0A140TA64 210 aa2.19□□□□□ -2.06
TMTC2-204ENST00000549919 KRTAP19-3Q7Z4W3 81 aa2.19□□□□□ -2.06
TMTC2-204ENST00000549919 KRTAP9-3Q9BYQ3 159 aa2.19□□□□□ -2.06
TMTC2-204ENST00000549919 SPRR2EP22531 72 aa2.18□□□□□ -2.06
TMTC2-204ENST00000549919 SPRR2BP35325 72 aa2.18□□□□□ -2.06
TMTC2-204ENST00000549919 SPRR2AP35326 72 aa2.18□□□□□ -2.06
TMTC2-204ENST00000549919 MT1AP04731 61 aa2.15□□□□□ -2.07
TMTC2-204ENST00000549919 LCE2BO14633 110 aa2.15□□□□□ -2.07
TMTC2-204ENST00000549919 LCE2CQ5TA81 110 aa2.15□□□□□ -2.07
TMTC2-204ENST00000549919 DNHD1Q96M86 4753 aa2.14□□□□□ -2.07
TMTC2-204ENST00000549919 MT1MQ8N339 61 aa2.13□□□□□ -2.07
TMTC2-204ENST00000549919 KRTAP19-2Q3LHN2 52 aa2.13□□□□□ -2.07
TMTC2-204ENST00000549919 SPRR2DP22532 72 aa2.11□□□□□ -2.07
TMTC2-204ENST00000549919 KRTAP4-9Q9BYQ8 210 aa2.1□□□□□ -2.07
TMTC2-204ENST00000549919 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
TMTC2-204ENST00000549919 KRTAP4-3Q9BYR4 195 aa2.08□□□□□ -2.08
TMTC2-204ENST00000549919 KRTAP9-7A8MTY7 169 aa2.07□□□□□ -2.08
TMTC2-204ENST00000549919 LPAP08519 4548 aa2.06□□□□□ -2.08
TMTC2-204ENST00000549919 KRTAP9-6A8MVA2 160 aa2.06□□□□□ -2.08
TMTC2-204ENST00000549919 KRTAP4-6Q9BYQ5 205 aa2.04□□□□□ -2.08
TMTC2-204ENST00000549919 KRTAP9-2Q9BYQ4 174 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms