RNA–Protein interactions for RNA: ENST00000549207.1

RRN3P3-201, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 3, humanhuman

BASIC

Gene RRN3P3, Length 578 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P3-201ENST00000549207 ABCA2Q9BZC7 2435 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 WDFY3Q8IZQ1 3526 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 HECTD1Q9ULT8 2610 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 USP24Q9UPU5 2620 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 C2CD3Q4AC94 2353 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 LAMA2P24043 3122 aaKnown RBP0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 A0A096LPF7 62 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 C9orf92A6NGG3 77 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 DEFB108BQ8NET1 73 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 PKD1P98161 4303 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 VCANP13611 3396 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 CEP250Q9BV73 2442 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 COL6A5A8TX70 2615 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 ZNF292O60281 2723 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 HECTD4Q9Y4D8 3996 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 DNAH14Q0VDD8 3507 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 CUBNO60494 3623 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 CEP290O15078 2479 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 NAV2Q8IVL1 2488 aa0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 LRP1Q07954 4544 aaKnown RBP0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 UTP20O75691 2785 aaKnown RBP0.39□□□□□ -2.35
RRN3P3-201ENST00000549207 FAT3Q8TDW7 4589 aa0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 CREBBPQ92793 2442 aa0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 APOBP04114 4563 aaKnown RBP0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 DNAH9Q9NYC9 4486 aa0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 CSMD2Q7Z408 3487 aa0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 EPG5Q9HCE0 2579 aa0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 STAB1Q9NY15 2570 aa0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 RIF1Q5UIP0 2472 aaKnown RBP0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 LPAP08519 4548 aa0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 TNP1P09430 55 aa0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 CD52P31358 61 aa0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 MXRA5Q9NR99 2828 aa0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 ZANQ9Y493 2812 aa0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 BDP1A6H8Y1 2624 aa0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 PKHD1P08F94 4074 aa0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 VPS13CQ709C8 3753 aa0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 PKD1L2Q7Z442 2459 aa0.38□□□□□ -2.35
RRN3P3-201ENST00000549207 ITPR2Q14571 2701 aa0.37□□□□□ -2.35
RRN3P3-201ENST00000549207 CACNA1AO00555 2505 aa0.37□□□□□ -2.35
RRN3P3-201ENST00000549207 ADGRG4Q8IZF6 3080 aa0.37□□□□□ -2.35
RRN3P3-201ENST00000549207 POLQO75417 2590 aa0.37□□□□□ -2.35
RRN3P3-201ENST00000549207 PTPN13Q12923 2485 aa0.37□□□□□ -2.35
RRN3P3-201ENST00000549207 A0A096LNI7 61 aa0.37□□□□□ -2.35
RRN3P3-201ENST00000549207 DEFB136Q30KP8 78 aa0.37□□□□□ -2.35
RRN3P3-201ENST00000549207 KRTAP19-5Q3LI72 72 aa0.37□□□□□ -2.35
RRN3P3-201ENST00000549207 U3KQA8 63 aa0.37□□□□□ -2.35
RRN3P3-201ENST00000549207 FAT2Q9NYQ8 4349 aa0.37□□□□□ -2.35
RRN3P3-201ENST00000549207 DMBT1Q9UGM3 2413 aaPredicted RBP0.36□□□□□ -2.35
RRN3P3-201ENST00000549207 ABCA12Q86UK0 2595 aa0.36□□□□□ -2.35
RRN3P3-201ENST00000549207 MAP1BP46821 2468 aaKnown RBP0.36□□□□□ -2.35
RRN3P3-201ENST00000549207 HTN1P15515 57 aa0.36□□□□□ -2.35
RRN3P3-201ENST00000549207 CDH23Q9H251 3354 aa0.36□□□□□ -2.35
RRN3P3-201ENST00000549207 SVEP1Q4LDE5 3571 aa0.36□□□□□ -2.35
RRN3P3-201ENST00000549207 DNAH5Q8TE73 4624 aa0.36□□□□□ -2.35
RRN3P3-201ENST00000549207 CCDC168Q8NDH2 2452 aa0.36□□□□□ -2.35
RRN3P3-201ENST00000549207 ATRQ13535 2644 aa0.35□□□□□ -2.35
RRN3P3-201ENST00000549207 PLECQ15149 4684 aaKnown RBP0.35□□□□□ -2.35
RRN3P3-201ENST00000549207 FAM186AA6NE01 2351 aa0.35□□□□□ -2.35
RRN3P3-201ENST00000549207 LRRK2Q5S007 2527 aa0.35□□□□□ -2.35
RRN3P3-201ENST00000549207 ANKHD1Q8IWZ3 2542 aaKnown RBP0.35□□□□□ -2.35
RRN3P3-201ENST00000549207 EYSQ5T1H1 3165 aa0.35□□□□□ -2.35
RRN3P3-201ENST00000549207 DEFB135Q30KP9 77 aa0.35□□□□□ -2.35
RRN3P3-201ENST00000549207 TGP01266 2768 aa0.35□□□□□ -2.35
RRN3P3-201ENST00000549207 NBEAL2Q6ZNJ1 2754 aa0.35□□□□□ -2.35
RRN3P3-201ENST00000549207 TEX15Q9BXT5 2789 aa0.35□□□□□ -2.35
RRN3P3-201ENST00000549207 ACANP16112 2415 aa0.35□□□□□ -2.35
RRN3P3-201ENST00000549207 TTC28Q96AY4 2481 aa0.35□□□□□ -2.35
RRN3P3-201ENST00000549207 PKD1L1Q8TDX9 2849 aa0.34□□□□□ -2.35
RRN3P3-201ENST00000549207 USP9XQ93008 2570 aaPredicted RBP0.34□□□□□ -2.35
RRN3P3-201ENST00000549207 SMR3BP02814 79 aaPredicted RBP0.34□□□□□ -2.36
RRN3P3-201ENST00000549207 MT1AP04731 61 aa0.34□□□□□ -2.36
RRN3P3-201ENST00000549207 TEP1Q99973 2627 aaKnown RBP0.34□□□□□ -2.36
RRN3P3-201ENST00000549207 SETXQ7Z333 2677 aaKnown RBP0.34□□□□□ -2.36
RRN3P3-201ENST00000549207 MUC17Q685J3 4493 aa0.34□□□□□ -2.36
RRN3P3-201ENST00000549207 NBEAL1Q6ZS30 2694 aa0.33□□□□□ -2.36
RRN3P3-201ENST00000549207 CFAP46Q8IYW2 2715 aa0.33□□□□□ -2.36
RRN3P3-201ENST00000549207 AHNAKQ09666 5890 aaKnown RBP0.33□□□□□ -2.36
RRN3P3-201ENST00000549207 DYNC1H1Q14204 4646 aaKnown RBP0.33□□□□□ -2.36
RRN3P3-201ENST00000549207 FLNAP21333 2647 aaKnown RBP0.33□□□□□ -2.36
RRN3P3-201ENST00000549207 UNC79Q9P2D8 2635 aa0.33□□□□□ -2.36
RRN3P3-201ENST00000549207 M0R2T5 61 aa0.33□□□□□ -2.36
RRN3P3-201ENST00000549207 SPINK6Q6UWN8 80 aa0.33□□□□□ -2.36
RRN3P3-201ENST00000549207 GCN1Q92616 2671 aaKnown RBP0.33□□□□□ -2.36
RRN3P3-201ENST00000549207 PIEZO1Q92508 2521 aa0.33□□□□□ -2.36
RRN3P3-201ENST00000549207 NBASA2RRP1 2371 aa0.33□□□□□ -2.36
RRN3P3-201ENST00000549207 ZFYVE26Q68DK2 2539 aa0.32□□□□□ -2.36
RRN3P3-201ENST00000549207 CENPEQ02224 2701 aa0.32□□□□□ -2.36
RRN3P3-201ENST00000549207 MUC5BQ9HC84 5762 aaPredicted RBP0.32□□□□□ -2.36
RRN3P3-201ENST00000549207 PRM1P04553 51 aa0.32□□□□□ -2.36
RRN3P3-201ENST00000549207 SPART-AS1P0CW21 52 aa0.32□□□□□ -2.36
RRN3P3-201ENST00000549207 DEFB133Q30KQ1 61 aa0.32□□□□□ -2.36
RRN3P3-201ENST00000549207 ANKRD11Q6UB99 2663 aaPredicted RBP0.32□□□□□ -2.36
RRN3P3-201ENST00000549207 CHD8Q9HCK8 2581 aa0.32□□□□□ -2.36
RRN3P3-201ENST00000549207 FLNBO75369 2602 aaKnown RBP0.31□□□□□ -2.36
RRN3P3-201ENST00000549207 STARD9Q9P2P6 4700 aa0.31□□□□□ -2.36
RRN3P3-201ENST00000549207 SPG11Q96JI7 2443 aa0.31□□□□□ -2.36
RRN3P3-201ENST00000549207 KRTAP21-1Q3LI58 79 aa0.31□□□□□ -2.36
RRN3P3-201ENST00000549207 SONP18583 2426 aaKnown RBP0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms