RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 H0YAA0 97 aa4.64□□□□□ -1.67
NECAP1-207ENST00000544891 C10orf95Q9H7T3 257 aa4.63□□□□□ -1.67
NECAP1-207ENST00000544891 FAT2Q9NYQ8 4349 aa4.63□□□□□ -1.67
NECAP1-207ENST00000544891 SACSQ9NZJ4 4579 aa4.63□□□□□ -1.67
NECAP1-207ENST00000544891 P0C880 135 aa4.63□□□□□ -1.67
NECAP1-207ENST00000544891 KMT2AQ03164 3969 aa4.61□□□□□ -1.67
NECAP1-207ENST00000544891 PKHD1P08F94 4074 aa4.6□□□□□ -1.67
NECAP1-207ENST00000544891 PKD1L1Q8TDX9 2849 aa4.59□□□□□ -1.68
NECAP1-207ENST00000544891 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
NECAP1-207ENST00000544891 COL7A1Q02388 2944 aa4.54□□□□□ -1.68
NECAP1-207ENST00000544891 TENM2Q9NT68 2774 aa4.52□□□□□ -1.69
NECAP1-207ENST00000544891 DNHD1Q96M86 4753 aa4.52□□□□□ -1.69
NECAP1-207ENST00000544891 KRTAP10-4P60372 401 aaPredicted RBP4.51□□□□□ -1.69
NECAP1-207ENST00000544891 MEGF8Q7Z7M0 2845 aa4.49□□□□□ -1.69
NECAP1-207ENST00000544891 DYNC1H1Q14204 4646 aaKnown RBP4.49□□□□□ -1.69
NECAP1-207ENST00000544891 VPS13BQ7Z7G8 4022 aa4.49□□□□□ -1.69
NECAP1-207ENST00000544891 TGP01266 2768 aa4.49□□□□□ -1.69
NECAP1-207ENST00000544891 APOBP04114 4563 aaKnown RBP4.48□□□□□ -1.69
NECAP1-207ENST00000544891 INE1O15225 51 aa4.47□□□□□ -1.69
NECAP1-207ENST00000544891 HYDINQ4G0P3 5121 aa4.47□□□□□ -1.69
NECAP1-207ENST00000544891 FBN3Q75N90 2809 aa4.46□□□□□ -1.7
NECAP1-207ENST00000544891 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
NECAP1-207ENST00000544891 KRTAP13-4Q3LI77 160 aa4.41□□□□□ -1.7
NECAP1-207ENST00000544891 RYR2Q92736 4967 aa4.41□□□□□ -1.7
NECAP1-207ENST00000544891 LRP1BQ9NZR2 4599 aa4.39□□□□□ -1.71
NECAP1-207ENST00000544891 HSPG2P98160 4391 aa4.36□□□□□ -1.71
NECAP1-207ENST00000544891 KRTAP12-1P59990 96 aa4.34□□□□□ -1.71
NECAP1-207ENST00000544891 TNXBP22105 4242 aa4.33□□□□□ -1.72
NECAP1-207ENST00000544891 KRTAP12-2P59991 146 aa4.32□□□□□ -1.72
NECAP1-207ENST00000544891 KRTAP3-1Q9BYR8 98 aa4.3□□□□□ -1.72
NECAP1-207ENST00000544891 FAT1Q14517 4588 aa4.29□□□□□ -1.72
NECAP1-207ENST00000544891 SRRM2Q9UQ35 2752 aaKnown RBP4.27□□□□□ -1.73
NECAP1-207ENST00000544891 FAT3Q8TDW7 4589 aa4.24□□□□□ -1.73
NECAP1-207ENST00000544891 KRTAP10-6P60371 365 aaPredicted RBP4.22□□□□□ -1.73
NECAP1-207ENST00000544891 MT1HL1P0DM35 61 aa4.22□□□□□ -1.73
NECAP1-207ENST00000544891 RYR1P21817 5038 aa4.16□□□□□ -1.74
NECAP1-207ENST00000544891 MUC17Q685J3 4493 aa4.14□□□□□ -1.75
NECAP1-207ENST00000544891 KRTAP17-1Q9BYP8 105 aa4.07□□□□□ -1.76
NECAP1-207ENST00000544891 KRTAP3-2Q9BYR7 98 aa4.07□□□□□ -1.76
NECAP1-207ENST00000544891 RYR3Q15413 4870 aa4.05□□□□□ -1.76
NECAP1-207ENST00000544891 KRTAP3-3Q9BYR6 98 aa4.04□□□□□ -1.76
NECAP1-207ENST00000544891 KMT2CQ8NEZ4 4911 aaKnown RBP4.04□□□□□ -1.76
NECAP1-207ENST00000544891 LCE2DQ5TA82 110 aaPredicted RBP4.04□□□□□ -1.76
NECAP1-207ENST00000544891 LRP1Q07954 4544 aaKnown RBP4.02□□□□□ -1.77
NECAP1-207ENST00000544891 KRTAP10-12P60413 245 aa4.01□□□□□ -1.77
NECAP1-207ENST00000544891 KRTAP4-5Q9BYR2 181 aa3.99□□□□□ -1.77
NECAP1-207ENST00000544891 MYCBP2O75592 4640 aa3.98□□□□□ -1.77
NECAP1-207ENST00000544891 KRTAP12-3P60328 96 aa3.9□□□□□ -1.78
NECAP1-207ENST00000544891 BIRC6Q9NR09 4857 aa3.88□□□□□ -1.79
NECAP1-207ENST00000544891 EPPK1P58107 5090 aaKnown RBP3.87□□□□□ -1.79
NECAP1-207ENST00000544891 HERC2O95714 4834 aa3.86□□□□□ -1.79
NECAP1-207ENST00000544891 KRTAP4-1Q9BYQ7 146 aa3.78□□□□□ -1.8
NECAP1-207ENST00000544891 KRTAP19-4Q3LI73 84 aa3.77□□□□□ -1.81
NECAP1-207ENST00000544891 KIAA1109Q2LD37 5005 aa3.77□□□□□ -1.81
NECAP1-207ENST00000544891 LCE3AQ5TA76 89 aa3.76□□□□□ -1.81
NECAP1-207ENST00000544891 ABCA13Q86UQ4 5058 aa3.76□□□□□ -1.81
NECAP1-207ENST00000544891 HERC1Q15751 4861 aa3.76□□□□□ -1.81
NECAP1-207ENST00000544891 KRTAP19-2Q3LHN2 52 aa3.74□□□□□ -1.81
NECAP1-207ENST00000544891 LPAP08519 4548 aa3.71□□□□□ -1.82
NECAP1-207ENST00000544891 LORP23490 312 aaPredicted RBP3.69□□□□□ -1.82
NECAP1-207ENST00000544891 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
NECAP1-207ENST00000544891 CRCT1Q9UGL9 99 aa3.67□□□□□ -1.82
NECAP1-207ENST00000544891 SPRR2GQ9BYE4 73 aa3.66□□□□□ -1.82
NECAP1-207ENST00000544891 FLGP20930 4061 aaPredicted RBP3.61□□□□□ -1.83
NECAP1-207ENST00000544891 MT1HP80294 61 aa3.6□□□□□ -1.83
NECAP1-207ENST00000544891 LRP2P98164 4655 aa3.6□□□□□ -1.83
NECAP1-207ENST00000544891 MT2AP02795 61 aa3.59□□□□□ -1.84
NECAP1-207ENST00000544891 PCLOQ9Y6V0 5065 aa3.58□□□□□ -1.84
NECAP1-207ENST00000544891 LCE2CQ5TA81 110 aa3.58□□□□□ -1.84
NECAP1-207ENST00000544891 HMCN2Q8NDA2 5059 aa3.55□□□□□ -1.84
NECAP1-207ENST00000544891 KRTAP10-5P60370 271 aa3.52□□□□□ -1.85
NECAP1-207ENST00000544891 MT3P25713 68 aa3.5□□□□□ -1.85
NECAP1-207ENST00000544891 MT1FP04733 61 aa3.46□□□□□ -1.86
NECAP1-207ENST00000544891 LCE2BO14633 110 aa3.45□□□□□ -1.86
NECAP1-207ENST00000544891 KRTAP10-7P60409 375 aaPredicted RBP3.43□□□□□ -1.86
NECAP1-207ENST00000544891 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
NECAP1-207ENST00000544891 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
NECAP1-207ENST00000544891 KRTAP9-8Q9BYQ0 159 aa3.42□□□□□ -1.86
NECAP1-207ENST00000544891 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.86
NECAP1-207ENST00000544891 KRTAP19-1Q8IUB9 90 aa3.39□□□□□ -1.87
NECAP1-207ENST00000544891 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
NECAP1-207ENST00000544891 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
NECAP1-207ENST00000544891 KRTAP9-3Q9BYQ3 159 aa3.32□□□□□ -1.88
NECAP1-207ENST00000544891 RNF213Q63HN8 5207 aa3.31□□□□□ -1.88
NECAP1-207ENST00000544891 LCE2AQ5TA79 106 aaPredicted RBP3.3□□□□□ -1.88
NECAP1-207ENST00000544891 MT1BP07438 61 aa3.28□□□□□ -1.88
NECAP1-207ENST00000544891 MT1XP80297 61 aa3.24□□□□□ -1.89
NECAP1-207ENST00000544891 FAT4Q6V0I7 4981 aa3.21□□□□□ -1.89
NECAP1-207ENST00000544891 MT1GP13640 62 aa3.19□□□□□ -1.9
NECAP1-207ENST00000544891 SPRR2EP22531 72 aa3.15□□□□□ -1.9
NECAP1-207ENST00000544891 SPRR2BP35325 72 aa3.15□□□□□ -1.9
NECAP1-207ENST00000544891 SPRR2AP35326 72 aa3.15□□□□□ -1.9
NECAP1-207ENST00000544891 MUC2Q02817 5179 aa3.13□□□□□ -1.91
NECAP1-207ENST00000544891 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
NECAP1-207ENST00000544891 UBR4Q5T4S7 5183 aa3.09□□□□□ -1.91
NECAP1-207ENST00000544891 SPRR2DP22532 72 aa3.07□□□□□ -1.92
NECAP1-207ENST00000544891 KRTAP19-6Q3LI70 58 aa3.02□□□□□ -1.93
NECAP1-207ENST00000544891 LCE3BQ5TA77 95 aa3.02□□□□□ -1.93
NECAP1-207ENST00000544891 MT1LQ93083 61 aa3.02□□□□□ -1.93
NECAP1-207ENST00000544891 KRTAP19-3Q7Z4W3 81 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms