RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
ABCB1-210ENST00000543898 DNAH2Q9P225 4427 aa4.34□□□□□ -1.71
ABCB1-210ENST00000543898 XP32Q5T750 250 aa4.33□□□□□ -1.72
ABCB1-210ENST00000543898 KRTAP10-8P60410 259 aa4.33□□□□□ -1.72
ABCB1-210ENST00000543898 HECTD4Q9Y4D8 3996 aa4.31□□□□□ -1.72
ABCB1-210ENST00000543898 DNAH6Q9C0G6 4158 aa4.3□□□□□ -1.72
ABCB1-210ENST00000543898 KRTAP3-3Q9BYR6 98 aa4.29□□□□□ -1.72
ABCB1-210ENST00000543898 PRKDCP78527 4128 aaKnown RBP4.29□□□□□ -1.72
ABCB1-210ENST00000543898 KRTAP3-2Q9BYR7 98 aa4.28□□□□□ -1.72
ABCB1-210ENST00000543898 KRTAP12-1P59990 96 aa4.27□□□□□ -1.73
ABCB1-210ENST00000543898 VPS13BQ7Z7G8 4022 aa4.24□□□□□ -1.73
ABCB1-210ENST00000543898 DNAH5Q8TE73 4624 aa4.22□□□□□ -1.73
ABCB1-210ENST00000543898 FAT1Q14517 4588 aa4.22□□□□□ -1.73
ABCB1-210ENST00000543898 DYNC2H1Q8NCM8 4307 aaKnown RBP4.19□□□□□ -1.74
ABCB1-210ENST00000543898 A0A1B0GVY2 172 aa4.18□□□□□ -1.74
ABCB1-210ENST00000543898 KRTAP10-4P60372 401 aaPredicted RBP4.16□□□□□ -1.74
ABCB1-210ENST00000543898 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
ABCB1-210ENST00000543898 MYCBP2O75592 4640 aa4.13□□□□□ -1.75
ABCB1-210ENST00000543898 DYNC1H1Q14204 4646 aaKnown RBP4.09□□□□□ -1.75
ABCB1-210ENST00000543898 HYDINQ4G0P3 5121 aa4.08□□□□□ -1.76
ABCB1-210ENST00000543898 SACSQ9NZJ4 4579 aa4.07□□□□□ -1.76
ABCB1-210ENST00000543898 PKHD1P08F94 4074 aa4.04□□□□□ -1.76
ABCB1-210ENST00000543898 PP632Q6XCG6 107 aa4.02□□□□□ -1.77
ABCB1-210ENST00000543898 APOBP04114 4563 aaKnown RBP4.01□□□□□ -1.77
ABCB1-210ENST00000543898 LRP1Q07954 4544 aaKnown RBP4.01□□□□□ -1.77
ABCB1-210ENST00000543898 TNP1P09430 55 aa4.01□□□□□ -1.77
ABCB1-210ENST00000543898 FAT2Q9NYQ8 4349 aa3.99□□□□□ -1.77
ABCB1-210ENST00000543898 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
ABCB1-210ENST00000543898 KRTAP17-1Q9BYP8 105 aa3.97□□□□□ -1.77
ABCB1-210ENST00000543898 MT1HL1P0DM35 61 aa3.97□□□□□ -1.77
ABCB1-210ENST00000543898 LORP23490 312 aaPredicted RBP3.97□□□□□ -1.77
ABCB1-210ENST00000543898 PKD1P98161 4303 aa3.97□□□□□ -1.77
ABCB1-210ENST00000543898 M0R2T5 61 aa3.96□□□□□ -1.78
ABCB1-210ENST00000543898 KMT2CQ8NEZ4 4911 aaKnown RBP3.94□□□□□ -1.78
ABCB1-210ENST00000543898 FAT3Q8TDW7 4589 aa3.94□□□□□ -1.78
ABCB1-210ENST00000543898 INE1O15225 51 aa3.93□□□□□ -1.78
ABCB1-210ENST00000543898 HSPG2P98160 4391 aa3.89□□□□□ -1.79
ABCB1-210ENST00000543898 RYR3Q15413 4870 aa3.88□□□□□ -1.79
ABCB1-210ENST00000543898 LRP2P98164 4655 aa3.86□□□□□ -1.79
ABCB1-210ENST00000543898 RYR1P21817 5038 aa3.84□□□□□ -1.79
ABCB1-210ENST00000543898 KIAA1109Q2LD37 5005 aa3.82□□□□□ -1.8
ABCB1-210ENST00000543898 KRTAP4-5Q9BYR2 181 aa3.79□□□□□ -1.8
ABCB1-210ENST00000543898 PKHD1L1Q86WI1 4243 aa3.78□□□□□ -1.8
ABCB1-210ENST00000543898 KRTAP4-1Q9BYQ7 146 aa3.76□□□□□ -1.81
ABCB1-210ENST00000543898 LPAP08519 4548 aa3.73□□□□□ -1.81
ABCB1-210ENST00000543898 BIRC6Q9NR09 4857 aa3.72□□□□□ -1.81
ABCB1-210ENST00000543898 RYR2Q92736 4967 aa3.72□□□□□ -1.81
ABCB1-210ENST00000543898 EPPK1P58107 5090 aaKnown RBP3.71□□□□□ -1.82
ABCB1-210ENST00000543898 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
ABCB1-210ENST00000543898 TNXBP22105 4242 aa3.7□□□□□ -1.82
ABCB1-210ENST00000543898 KRTAP10-10P60014 251 aa3.69□□□□□ -1.82
ABCB1-210ENST00000543898 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
ABCB1-210ENST00000543898 ABCA13Q86UQ4 5058 aa3.54□□□□□ -1.84
ABCB1-210ENST00000543898 PCLOQ9Y6V0 5065 aa3.53□□□□□ -1.84
ABCB1-210ENST00000543898 MUC2Q02817 5179 aa3.48□□□□□ -1.85
ABCB1-210ENST00000543898 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
ABCB1-210ENST00000543898 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
ABCB1-210ENST00000543898 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
ABCB1-210ENST00000543898 KRTAP9-2Q9BYQ4 174 aa3.44□□□□□ -1.86
ABCB1-210ENST00000543898 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
ABCB1-210ENST00000543898 HERC2O95714 4834 aa3.43□□□□□ -1.86
ABCB1-210ENST00000543898 SPRR2GQ9BYE4 73 aa3.43□□□□□ -1.86
ABCB1-210ENST00000543898 KRTAP19-1Q8IUB9 90 aa3.41□□□□□ -1.86
ABCB1-210ENST00000543898 MUC17Q685J3 4493 aa3.38□□□□□ -1.87
ABCB1-210ENST00000543898 MT1FP04733 61 aa3.36□□□□□ -1.87
ABCB1-210ENST00000543898 KRTAP8-1Q8IUC2 63 aa3.36□□□□□ -1.87
ABCB1-210ENST00000543898 MT2AP02795 61 aa3.35□□□□□ -1.87
ABCB1-210ENST00000543898 FLGP20930 4061 aaPredicted RBP3.34□□□□□ -1.87
ABCB1-210ENST00000543898 MT1HP80294 61 aa3.34□□□□□ -1.87
ABCB1-210ENST00000543898 FAT4Q6V0I7 4981 aa3.34□□□□□ -1.88
ABCB1-210ENST00000543898 HERC1Q15751 4861 aa3.34□□□□□ -1.88
ABCB1-210ENST00000543898 LCE2CQ5TA81 110 aa3.28□□□□□ -1.88
ABCB1-210ENST00000543898 CRCT1Q9UGL9 99 aa3.28□□□□□ -1.88
ABCB1-210ENST00000543898 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
ABCB1-210ENST00000543898 MT1XP80297 61 aa3.24□□□□□ -1.89
ABCB1-210ENST00000543898 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
ABCB1-210ENST00000543898 LCE2DQ5TA82 110 aaPredicted RBP3.24□□□□□ -1.89
ABCB1-210ENST00000543898 RNF213Q63HN8 5207 aa3.22□□□□□ -1.89
ABCB1-210ENST00000543898 KRTAP9-7A8MTY7 169 aa3.22□□□□□ -1.89
ABCB1-210ENST00000543898 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
ABCB1-210ENST00000543898 HMCN2Q8NDA2 5059 aa3.21□□□□□ -1.9
ABCB1-210ENST00000543898 MT1BP07438 61 aa3.21□□□□□ -1.9
ABCB1-210ENST00000543898 KRTAP19-8Q3LI54 63 aa3.2□□□□□ -1.9
ABCB1-210ENST00000543898 KRTAP9-8Q9BYQ0 159 aa3.2□□□□□ -1.9
ABCB1-210ENST00000543898 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
ABCB1-210ENST00000543898 UBR4Q5T4S7 5183 aa3.15□□□□□ -1.91
ABCB1-210ENST00000543898 KRTAP4-8A0A0G2JLE6 195 aa3.09□□□□□ -1.92
ABCB1-210ENST00000543898 KRTAP4-8Q9BYQ9 185 aa3.09□□□□□ -1.92
ABCB1-210ENST00000543898 KRTAP9-3Q9BYQ3 159 aa3.05□□□□□ -1.92
ABCB1-210ENST00000543898 KRTAP4-7Q9BYR0 210 aa3.04□□□□□ -1.92
ABCB1-210ENST00000543898 KMT2DO14686 5537 aa3□□□□□ -1.93
ABCB1-210ENST00000543898 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.99□□□□□ -1.93
ABCB1-210ENST00000543898 KRTAP20-1Q3LI63 56 aa2.98□□□□□ -1.93
ABCB1-210ENST00000543898 USH2AO75445 5202 aa2.96□□□□□ -1.94
ABCB1-210ENST00000543898 LCE2BO14633 110 aa2.95□□□□□ -1.94
ABCB1-210ENST00000543898 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
ABCB1-210ENST00000543898 FSIP2Q5CZC0 6907 aa2.93□□□□□ -1.94
ABCB1-210ENST00000543898 SYNE1Q8NF91 8797 aaKnown RBP2.93□□□□□ -1.94
ABCB1-210ENST00000543898 KRTAP12-4P60329 112 aa2.91□□□□□ -1.94
ABCB1-210ENST00000543898 MT1GP13640 62 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms