RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 DNAH17Q9UFH2 4485 aa6.64□□□□□ -1.35
TUBGCP2-210ENST00000543663 MYCBP2O75592 4640 aa6.63□□□□□ -1.35
TUBGCP2-210ENST00000543663 ALMS1Q8TCU4 4167 aa6.63□□□□□ -1.35
TUBGCP2-210ENST00000543663 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
TUBGCP2-210ENST00000543663 DNAH6Q9C0G6 4158 aa6.6□□□□□ -1.35
TUBGCP2-210ENST00000543663 DNAH2Q9P225 4427 aa6.56□□□□□ -1.36
TUBGCP2-210ENST00000543663 KRTAP3-1Q9BYR8 98 aa6.55□□□□□ -1.36
TUBGCP2-210ENST00000543663 DYNC1H1Q14204 4646 aaKnown RBP6.53□□□□□ -1.36
TUBGCP2-210ENST00000543663 KIAA1109Q2LD37 5005 aa6.52□□□□□ -1.37
TUBGCP2-210ENST00000543663 HYDINQ4G0P3 5121 aa6.51□□□□□ -1.37
TUBGCP2-210ENST00000543663 TNP1P09430 55 aa6.5□□□□□ -1.37
TUBGCP2-210ENST00000543663 KRTAP12-2P59991 146 aa6.48□□□□□ -1.37
TUBGCP2-210ENST00000543663 KRTAP10-4P60372 401 aaPredicted RBP6.48□□□□□ -1.37
TUBGCP2-210ENST00000543663 FAT3Q8TDW7 4589 aa6.47□□□□□ -1.37
TUBGCP2-210ENST00000543663 VPS13BQ7Z7G8 4022 aa6.46□□□□□ -1.38
TUBGCP2-210ENST00000543663 PKHD1P08F94 4074 aa6.45□□□□□ -1.38
TUBGCP2-210ENST00000543663 LRP1Q07954 4544 aaKnown RBP6.44□□□□□ -1.38
TUBGCP2-210ENST00000543663 RYR1P21817 5038 aa6.44□□□□□ -1.38
TUBGCP2-210ENST00000543663 KRTAP4-5Q9BYR2 181 aa6.43□□□□□ -1.38
TUBGCP2-210ENST00000543663 TPRXLQ17RH7 258 aa6.42□□□□□ -1.38
TUBGCP2-210ENST00000543663 HECTD4Q9Y4D8 3996 aa6.41□□□□□ -1.38
TUBGCP2-210ENST00000543663 KRTAP13-4Q3LI77 160 aa6.41□□□□□ -1.38
TUBGCP2-210ENST00000543663 KMT2CQ8NEZ4 4911 aaKnown RBP6.36□□□□□ -1.39
TUBGCP2-210ENST00000543663 SACSQ9NZJ4 4579 aa6.35□□□□□ -1.39
TUBGCP2-210ENST00000543663 APOBP04114 4563 aaKnown RBP6.34□□□□□ -1.39
TUBGCP2-210ENST00000543663 RYR3Q15413 4870 aa6.33□□□□□ -1.4
TUBGCP2-210ENST00000543663 KRTAP12-1P59990 96 aa6.33□□□□□ -1.4
TUBGCP2-210ENST00000543663 MT1HL1P0DM35 61 aa6.31□□□□□ -1.4
TUBGCP2-210ENST00000543663 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
TUBGCP2-210ENST00000543663 KRTAP10-10P60014 251 aa6.26□□□□□ -1.41
TUBGCP2-210ENST00000543663 PP632Q6XCG6 107 aa6.23□□□□□ -1.41
TUBGCP2-210ENST00000543663 KRTAP17-1Q9BYP8 105 aa6.2□□□□□ -1.42
TUBGCP2-210ENST00000543663 FAT2Q9NYQ8 4349 aa6.17□□□□□ -1.42
TUBGCP2-210ENST00000543663 LRP2P98164 4655 aa6.13□□□□□ -1.43
TUBGCP2-210ENST00000543663 KRTAP3-3Q9BYR6 98 aa6.13□□□□□ -1.43
TUBGCP2-210ENST00000543663 RYR2Q92736 4967 aa6.11□□□□□ -1.43
TUBGCP2-210ENST00000543663 KRTAP3-2Q9BYR7 98 aa6.11□□□□□ -1.43
TUBGCP2-210ENST00000543663 PKD1P98161 4303 aa6.05□□□□□ -1.44
TUBGCP2-210ENST00000543663 HERC2O95714 4834 aa5.96□□□□□ -1.46
TUBGCP2-210ENST00000543663 EPPK1P58107 5090 aaKnown RBP5.94□□□□□ -1.46
TUBGCP2-210ENST00000543663 LORP23490 312 aaPredicted RBP5.91□□□□□ -1.46
TUBGCP2-210ENST00000543663 LPAP08519 4548 aa5.9□□□□□ -1.46
TUBGCP2-210ENST00000543663 KRTAP4-1Q9BYQ7 146 aa5.9□□□□□ -1.47
TUBGCP2-210ENST00000543663 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
TUBGCP2-210ENST00000543663 HSPG2P98160 4391 aa5.89□□□□□ -1.47
TUBGCP2-210ENST00000543663 PKHD1L1Q86WI1 4243 aa5.84□□□□□ -1.48
TUBGCP2-210ENST00000543663 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
TUBGCP2-210ENST00000543663 MUC2Q02817 5179 aa5.77□□□□□ -1.49
TUBGCP2-210ENST00000543663 ABCA13Q86UQ4 5058 aa5.74□□□□□ -1.49
TUBGCP2-210ENST00000543663 PCLOQ9Y6V0 5065 aa5.7□□□□□ -1.5
TUBGCP2-210ENST00000543663 RNF213Q63HN8 5207 aa5.67□□□□□ -1.5
TUBGCP2-210ENST00000543663 HERC1Q15751 4861 aa5.65□□□□□ -1.51
TUBGCP2-210ENST00000543663 TNXBP22105 4242 aa5.64□□□□□ -1.51
TUBGCP2-210ENST00000543663 FAT4Q6V0I7 4981 aa5.56□□□□□ -1.52
TUBGCP2-210ENST00000543663 LCE3AQ5TA76 89 aa5.52□□□□□ -1.53
TUBGCP2-210ENST00000543663 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
TUBGCP2-210ENST00000543663 KRTAP10-12P60413 245 aa5.49□□□□□ -1.53
TUBGCP2-210ENST00000543663 BIRC6Q9NR09 4857 aa5.49□□□□□ -1.53
TUBGCP2-210ENST00000543663 UBR4Q5T4S7 5183 aa5.45□□□□□ -1.54
TUBGCP2-210ENST00000543663 KRTAP12-3P60328 96 aa5.44□□□□□ -1.54
TUBGCP2-210ENST00000543663 FSIP2Q5CZC0 6907 aa5.43□□□□□ -1.54
TUBGCP2-210ENST00000543663 MT1HP80294 61 aa5.35□□□□□ -1.55
TUBGCP2-210ENST00000543663 KRTAP23-1A1A580 65 aa5.33□□□□□ -1.56
TUBGCP2-210ENST00000543663 MT1FP04733 61 aa5.29□□□□□ -1.56
TUBGCP2-210ENST00000543663 KRTAP19-2Q3LHN2 52 aa5.29□□□□□ -1.56
TUBGCP2-210ENST00000543663 MT2AP02795 61 aa5.28□□□□□ -1.56
TUBGCP2-210ENST00000543663 SPRR2GQ9BYE4 73 aa5.24□□□□□ -1.57
TUBGCP2-210ENST00000543663 INE1O15225 51 aa5.2□□□□□ -1.58
TUBGCP2-210ENST00000543663 HMCN2Q8NDA2 5059 aa5.19□□□□□ -1.58
TUBGCP2-210ENST00000543663 MUC17Q685J3 4493 aa5.19□□□□□ -1.58
TUBGCP2-210ENST00000543663 LCE2CQ5TA81 110 aa5.17□□□□□ -1.58
TUBGCP2-210ENST00000543663 KRTAP19-1Q8IUB9 90 aa5.17□□□□□ -1.58
TUBGCP2-210ENST00000543663 FLGP20930 4061 aaPredicted RBP5.11□□□□□ -1.59
TUBGCP2-210ENST00000543663 OBSCNQ5VST9 7968 aa5.08□□□□□ -1.6
TUBGCP2-210ENST00000543663 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
TUBGCP2-210ENST00000543663 KRTAP10-5P60370 271 aa5.05□□□□□ -1.6
TUBGCP2-210ENST00000543663 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
TUBGCP2-210ENST00000543663 USH2AO75445 5202 aa5.02□□□□□ -1.61
TUBGCP2-210ENST00000543663 KRTAP19-8Q3LI54 63 aa5.01□□□□□ -1.61
TUBGCP2-210ENST00000543663 KRTAP10-7P60409 375 aaPredicted RBP4.94□□□□□ -1.62
TUBGCP2-210ENST00000543663 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
TUBGCP2-210ENST00000543663 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
TUBGCP2-210ENST00000543663 MT1BP07438 61 aa4.91□□□□□ -1.62
TUBGCP2-210ENST00000543663 MT1XP80297 61 aa4.88□□□□□ -1.63
TUBGCP2-210ENST00000543663 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
TUBGCP2-210ENST00000543663 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
TUBGCP2-210ENST00000543663 KMT2DO14686 5537 aa4.81□□□□□ -1.64
TUBGCP2-210ENST00000543663 KRTAP9-3Q9BYQ3 159 aa4.81□□□□□ -1.64
TUBGCP2-210ENST00000543663 LCE3CQ5T5A8 94 aa4.78□□□□□ -1.64
TUBGCP2-210ENST00000543663 LCE2BO14633 110 aa4.77□□□□□ -1.65
TUBGCP2-210ENST00000543663 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
TUBGCP2-210ENST00000543663 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
TUBGCP2-210ENST00000543663 SPRR2FQ96RM1 72 aa4.66□□□□□ -1.66
TUBGCP2-210ENST00000543663 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
TUBGCP2-210ENST00000543663 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
TUBGCP2-210ENST00000543663 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
TUBGCP2-210ENST00000543663 LCE2AQ5TA79 106 aaPredicted RBP4.56□□□□□ -1.68
TUBGCP2-210ENST00000543663 MT1GP13640 62 aa4.53□□□□□ -1.68
TUBGCP2-210ENST00000543663 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
TUBGCP2-210ENST00000543663 KRTAP12-4P60329 112 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms