RNA–Protein interactions for RNA: ENST00000543229.5

CCAR1-215, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 2

Gene CCAR1, Length 2,475 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-215ENST00000543229 UBE2DNLQ8IWF7 75 aa3.39□□□□□ -1.87
CCAR1-215ENST00000543229 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
CCAR1-215ENST00000543229 KMT2AQ03164 3969 aa3.38□□□□□ -1.87
CCAR1-215ENST00000543229 LCE3BQ5TA77 95 aa3.37□□□□□ -1.87
CCAR1-215ENST00000543229 NBDYA0A0U1RRE5 68 aa3.36□□□□□ -1.87
CCAR1-215ENST00000543229 CIRBP-AS1Q8TBR5 109 aa3.36□□□□□ -1.87
CCAR1-215ENST00000543229 Q6ZRN7 208 aaPredicted RBP3.35□□□□□ -1.87
CCAR1-215ENST00000543229 K7ERS5 55 aa3.34□□□□□ -1.87
CCAR1-215ENST00000543229 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.34□□□□□ -1.88
CCAR1-215ENST00000543229 COX6B2Q6YFQ2 88 aa3.33□□□□□ -1.88
CCAR1-215ENST00000543229 PKHD1P08F94 4074 aa3.33□□□□□ -1.88
CCAR1-215ENST00000543229 VPS13DQ5THJ4 4388 aa3.33□□□□□ -1.88
CCAR1-215ENST00000543229 DMBT1Q9UGM3 2413 aaPredicted RBP3.32□□□□□ -1.88
CCAR1-215ENST00000543229 SPACA4Q8TDM5 124 aa3.32□□□□□ -1.88
CCAR1-215ENST00000543229 DYNC1H1Q14204 4646 aaKnown RBP3.31□□□□□ -1.88
CCAR1-215ENST00000543229 DNAH11Q96DT5 4516 aa3.31□□□□□ -1.88
CCAR1-215ENST00000543229 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
CCAR1-215ENST00000543229 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
CCAR1-215ENST00000543229 KRTAP3-1Q9BYR8 98 aa3.3□□□□□ -1.88
CCAR1-215ENST00000543229 A0A0D9SG42 100 aa3.29□□□□□ -1.88
CCAR1-215ENST00000543229 KRTAP13-4Q3LI77 160 aa3.28□□□□□ -1.88
CCAR1-215ENST00000543229 KRTAP4-5Q9BYR2 181 aa3.28□□□□□ -1.88
CCAR1-215ENST00000543229 RPL37P61927 97 aaKnown RBP3.28□□□□□ -1.88
CCAR1-215ENST00000543229 HSPG2P98160 4391 aa3.27□□□□□ -1.89
CCAR1-215ENST00000543229 DNAH6Q9C0G6 4158 aa3.27□□□□□ -1.89
CCAR1-215ENST00000543229 FAT2Q9NYQ8 4349 aa3.26□□□□□ -1.89
CCAR1-215ENST00000543229 DNAH2Q9P225 4427 aa3.26□□□□□ -1.89
CCAR1-215ENST00000543229 LCE2BO14633 110 aa3.25□□□□□ -1.89
CCAR1-215ENST00000543229 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
CCAR1-215ENST00000543229 LCE2CQ5TA81 110 aa3.24□□□□□ -1.89
CCAR1-215ENST00000543229 LCE2AQ5TA79 106 aaPredicted RBP3.23□□□□□ -1.89
CCAR1-215ENST00000543229 PKD1P98161 4303 aa3.23□□□□□ -1.89
CCAR1-215ENST00000543229 APOBP04114 4563 aaKnown RBP3.23□□□□□ -1.89
CCAR1-215ENST00000543229 KRTAP10-6P60371 365 aaPredicted RBP3.21□□□□□ -1.89
CCAR1-215ENST00000543229 KRTAP13-2Q52LG2 175 aa3.21□□□□□ -1.89
CCAR1-215ENST00000543229 LRP1BQ9NZR2 4599 aa3.2□□□□□ -1.9
CCAR1-215ENST00000543229 KRTAP12-2P59991 146 aa3.19□□□□□ -1.9
CCAR1-215ENST00000543229 DNAH5Q8TE73 4624 aa3.19□□□□□ -1.9
CCAR1-215ENST00000543229 MYCBP2O75592 4640 aa3.18□□□□□ -1.9
CCAR1-215ENST00000543229 S4R3F8 94 aa3.18□□□□□ -1.9
CCAR1-215ENST00000543229 SEC61BP60468 96 aaKnown RBP3.17□□□□□ -1.9
CCAR1-215ENST00000543229 A0A1B0GVY2 172 aa3.17□□□□□ -1.9
CCAR1-215ENST00000543229 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
CCAR1-215ENST00000543229 KRTAP4-9Q9BYQ8 210 aa3.16□□□□□ -1.9
CCAR1-215ENST00000543229 HMCN2Q8NDA2 5059 aa3.15□□□□□ -1.9
CCAR1-215ENST00000543229 KRTAP10-2P60368 255 aa3.15□□□□□ -1.91
CCAR1-215ENST00000543229 KRTAP10-1P60331 282 aa3.12□□□□□ -1.91
CCAR1-215ENST00000543229 VPS13BQ7Z7G8 4022 aa3.12□□□□□ -1.91
CCAR1-215ENST00000543229 FAT1Q14517 4588 aa3.12□□□□□ -1.91
CCAR1-215ENST00000543229 PLAC4Q8WY50 150 aa3.12□□□□□ -1.91
CCAR1-215ENST00000543229 RNF213Q63HN8 5207 aa3.11□□□□□ -1.91
CCAR1-215ENST00000543229 KRTAP12-1P59990 96 aa3.11□□□□□ -1.91
CCAR1-215ENST00000543229 C9orf92A6NGG3 77 aa3.1□□□□□ -1.91
CCAR1-215ENST00000543229 KRTAP1-4P0C5Y4 121 aa3.1□□□□□ -1.91
CCAR1-215ENST00000543229 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
CCAR1-215ENST00000543229 RPS29P62273 56 aaKnown RBP3.07□□□□□ -1.92
CCAR1-215ENST00000543229 LORP23490 312 aaPredicted RBP3.04□□□□□ -1.92
CCAR1-215ENST00000543229 KRTAP10-8P60410 259 aa3.01□□□□□ -1.93
CCAR1-215ENST00000543229 LRP2P98164 4655 aa3.01□□□□□ -1.93
CCAR1-215ENST00000543229 LRP1Q07954 4544 aaKnown RBP3□□□□□ -1.93
CCAR1-215ENST00000543229 Q5VSD8 79 aa3□□□□□ -1.93
CCAR1-215ENST00000543229 FAT3Q8TDW7 4589 aa2.98□□□□□ -1.93
CCAR1-215ENST00000543229 PKHD1L1Q86WI1 4243 aa2.98□□□□□ -1.93
CCAR1-215ENST00000543229 KRTAP10-4P60372 401 aaPredicted RBP2.97□□□□□ -1.93
CCAR1-215ENST00000543229 FAT4Q6V0I7 4981 aa2.97□□□□□ -1.93
CCAR1-215ENST00000543229 SMR3BP02814 79 aaPredicted RBP2.95□□□□□ -1.94
CCAR1-215ENST00000543229 MUC2Q02817 5179 aa2.93□□□□□ -1.94
CCAR1-215ENST00000543229 CAMK2N1Q7Z7J9 78 aa2.92□□□□□ -1.94
CCAR1-215ENST00000543229 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
CCAR1-215ENST00000543229 PRO2289Q9P1D8 64 aa2.9□□□□□ -1.95
CCAR1-215ENST00000543229 TNXBP22105 4242 aa2.89□□□□□ -1.95
CCAR1-215ENST00000543229 KRTAP23-1A1A580 65 aa2.89□□□□□ -1.95
CCAR1-215ENST00000543229 M0QZ58 72 aa2.88□□□□□ -1.95
CCAR1-215ENST00000543229 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
CCAR1-215ENST00000543229 LPAP08519 4548 aa2.86□□□□□ -1.95
CCAR1-215ENST00000543229 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
CCAR1-215ENST00000543229 R4GN34 69 aa2.82□□□□□ -1.96
CCAR1-215ENST00000543229 PP632Q6XCG6 107 aa2.8□□□□□ -1.96
CCAR1-215ENST00000543229 MT1HL1P0DM35 61 aa2.77□□□□□ -1.97
CCAR1-215ENST00000543229 CRCT1Q9UGL9 99 aa2.76□□□□□ -1.97
CCAR1-215ENST00000543229 KRTAP19-1Q8IUB9 90 aa2.75□□□□□ -1.97
CCAR1-215ENST00000543229 INE1O15225 51 aa2.73□□□□□ -1.97
CCAR1-215ENST00000543229 KRTAP19-4Q3LI73 84 aa2.71□□□□□ -1.98
CCAR1-215ENST00000543229 HMCN1Q96RW7 5635 aa2.7□□□□□ -1.98
CCAR1-215ENST00000543229 KRTAP9-7A8MTY7 169 aa2.64□□□□□ -1.99
CCAR1-215ENST00000543229 TNP1P09430 55 aa2.61□□□□□ -1.99
CCAR1-215ENST00000543229 MUC17Q685J3 4493 aa2.59□□□□□ -2
CCAR1-215ENST00000543229 SYNE2Q8WXH0 6885 aaKnown RBP2.55□□□□□ -2
CCAR1-215ENST00000543229 KRTAP19-2Q3LHN2 52 aa2.53□□□□□ -2
CCAR1-215ENST00000543229 KRTAP4-1Q9BYQ7 146 aa2.53□□□□□ -2
CCAR1-215ENST00000543229 SSPOA2VEC9 5147 aa2.52□□□□□ -2.01
CCAR1-215ENST00000543229 LCE3AQ5TA76 89 aa2.5□□□□□ -2.01
CCAR1-215ENST00000543229 USH2AO75445 5202 aa2.49□□□□□ -2.01
CCAR1-215ENST00000543229 MACF1Q9UPN3 7388 aaKnown RBP2.48□□□□□ -2.01
CCAR1-215ENST00000543229 FCGBPQ9Y6R7 5405 aaPredicted RBP2.47□□□□□ -2.01
CCAR1-215ENST00000543229 FLGP20930 4061 aaPredicted RBP2.45□□□□□ -2.02
CCAR1-215ENST00000543229 KRTAP10-10P60014 251 aa2.45□□□□□ -2.02
CCAR1-215ENST00000543229 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
CCAR1-215ENST00000543229 KRTAP10-12P60413 245 aa2.43□□□□□ -2.02
CCAR1-215ENST00000543229 NEBP20929 6669 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms