RNA–Protein interactions for RNA: ENST00000542279.5

GTF2H3-209, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-209ENST00000542279 DYNC2H1Q8NCM8 4307 aaKnown RBP0.37□□□□□ -2.35
GTF2H3-209ENST00000542279 FASNP49327 2511 aaKnown RBP0.37□□□□□ -2.35
GTF2H3-209ENST00000542279 CFAP54Q96N23 3096 aa0.37□□□□□ -2.35
GTF2H3-209ENST00000542279 USP9XQ93008 2570 aaPredicted RBP0.37□□□□□ -2.35
GTF2H3-209ENST00000542279 A0A096LNI7 61 aa0.37□□□□□ -2.35
GTF2H3-209ENST00000542279 KRTAP6-2Q3LI66 62 aa0.37□□□□□ -2.35
GTF2H3-209ENST00000542279 LRP1Q07954 4544 aaKnown RBP0.37□□□□□ -2.35
GTF2H3-209ENST00000542279 AKAP9Q99996 3911 aa0.37□□□□□ -2.35
GTF2H3-209ENST00000542279 DNAH3Q8TD57 4116 aa0.36□□□□□ -2.35
GTF2H3-209ENST00000542279 SPTBN5Q9NRC6 3674 aaKnown RBP0.36□□□□□ -2.35
GTF2H3-209ENST00000542279 TNP1P09430 55 aa0.36□□□□□ -2.35
GTF2H3-209ENST00000542279 DEFB110Q30KQ9 67 aa0.36□□□□□ -2.35
GTF2H3-209ENST00000542279 FLNBO75369 2602 aaKnown RBP0.36□□□□□ -2.35
GTF2H3-209ENST00000542279 UTP20O75691 2785 aaKnown RBP0.36□□□□□ -2.35
GTF2H3-209ENST00000542279 DNAH2Q9P225 4427 aa0.36□□□□□ -2.35
GTF2H3-209ENST00000542279 PKD1P98161 4303 aa0.36□□□□□ -2.35
GTF2H3-209ENST00000542279 ANK3Q12955 4377 aaKnown RBP0.36□□□□□ -2.35
GTF2H3-209ENST00000542279 FLNAP21333 2647 aaKnown RBP0.35□□□□□ -2.35
GTF2H3-209ENST00000542279 LAMA5O15230 3695 aa0.35□□□□□ -2.35
GTF2H3-209ENST00000542279 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
GTF2H3-209ENST00000542279 WDR87Q6ZQQ6 2873 aa0.35□□□□□ -2.35
GTF2H3-209ENST00000542279 KRTAP8-1Q8IUC2 63 aa0.35□□□□□ -2.35
GTF2H3-209ENST00000542279 HECTD4Q9Y4D8 3996 aa0.35□□□□□ -2.35
GTF2H3-209ENST00000542279 ITPR1Q14643 2758 aa0.35□□□□□ -2.35
GTF2H3-209ENST00000542279 ATMQ13315 3056 aa0.35□□□□□ -2.35
GTF2H3-209ENST00000542279 FLGP20930 4061 aaPredicted RBP0.35□□□□□ -2.35
GTF2H3-209ENST00000542279 SVEP1Q4LDE5 3571 aa0.35□□□□□ -2.35
GTF2H3-209ENST00000542279 LRBAP50851 2863 aa0.35□□□□□ -2.35
GTF2H3-209ENST00000542279 SMR3BP02814 79 aaPredicted RBP0.34□□□□□ -2.36
GTF2H3-209ENST00000542279 KRTAP19-5Q3LI72 72 aa0.34□□□□□ -2.36
GTF2H3-209ENST00000542279 U3KQA8 63 aa0.34□□□□□ -2.36
GTF2H3-209ENST00000542279 CSMD1Q96PZ7 3565 aa0.34□□□□□ -2.36
GTF2H3-209ENST00000542279 DNAH6Q9C0G6 4158 aa0.34□□□□□ -2.36
GTF2H3-209ENST00000542279 DMXL2Q8TDJ6 3036 aa0.33□□□□□ -2.36
GTF2H3-209ENST00000542279 MAST4O15021 2626 aa0.33□□□□□ -2.36
GTF2H3-209ENST00000542279 SPTAN1Q13813 2472 aaKnown RBP0.33□□□□□ -2.36
GTF2H3-209ENST00000542279 HUWE1Q7Z6Z7 4374 aaKnown RBP0.33□□□□□ -2.36
GTF2H3-209ENST00000542279 SZT2Q5T011 3432 aa0.33□□□□□ -2.36
GTF2H3-209ENST00000542279 LAMA1P25391 3075 aa0.33□□□□□ -2.36
GTF2H3-209ENST00000542279 HTTP42858 3142 aa0.33□□□□□ -2.36
GTF2H3-209ENST00000542279 LAMA3Q16787 3333 aa0.33□□□□□ -2.36
GTF2H3-209ENST00000542279 KALRNO60229 2985 aa0.33□□□□□ -2.36
GTF2H3-209ENST00000542279 MXRA5Q9NR99 2828 aa0.32□□□□□ -2.36
GTF2H3-209ENST00000542279 C9orf92A6NGG3 77 aa0.32□□□□□ -2.36
GTF2H3-209ENST00000542279 SPRR2DP22532 72 aa0.32□□□□□ -2.36
GTF2H3-209ENST00000542279 SPART-AS1P0CW21 52 aa0.31□□□□□ -2.36
GTF2H3-209ENST00000542279 HTN1P15515 57 aa0.31□□□□□ -2.36
GTF2H3-209ENST00000542279 DNAH1Q9P2D7 4330 aa0.31□□□□□ -2.36
GTF2H3-209ENST00000542279 PRUNE2Q8WUY3 3088 aa0.31□□□□□ -2.36
GTF2H3-209ENST00000542279 ADGRG4Q8IZF6 3080 aa0.3□□□□□ -2.36
GTF2H3-209ENST00000542279 IGSF10Q6WRI0 2623 aa0.3□□□□□ -2.36
GTF2H3-209ENST00000542279 FRYLO94915 3013 aa0.3□□□□□ -2.36
GTF2H3-209ENST00000542279 DNAH12Q6ZR08 3092 aa0.3□□□□□ -2.36
GTF2H3-209ENST00000542279 MGAM2Q2M2H8 2515 aa0.3□□□□□ -2.36
GTF2H3-209ENST00000542279 NBEAQ8NFP9 2946 aa0.3□□□□□ -2.36
GTF2H3-209ENST00000542279 FAT3Q8TDW7 4589 aa0.3□□□□□ -2.36
GTF2H3-209ENST00000542279 MKI67P46013 3256 aaKnown RBP0.29□□□□□ -2.36
GTF2H3-209ENST00000542279 DNAH9Q9NYC9 4486 aa0.29□□□□□ -2.36
GTF2H3-209ENST00000542279 BOD1L1Q8NFC6 3051 aa0.29□□□□□ -2.36
GTF2H3-209ENST00000542279 APOBP04114 4563 aaKnown RBP0.29□□□□□ -2.36
GTF2H3-209ENST00000542279 PKHD1P08F94 4074 aa0.29□□□□□ -2.36
GTF2H3-209ENST00000542279 TLN1Q9Y490 2541 aaKnown RBP0.29□□□□□ -2.36
GTF2H3-209ENST00000542279 DNAH10Q8IVF4 4471 aa0.29□□□□□ -2.36
GTF2H3-209ENST00000542279 SSPOA2VEC9 5147 aa0.29□□□□□ -2.36
GTF2H3-209ENST00000542279 TRIOO75962 3097 aa0.28□□□□□ -2.36
GTF2H3-209ENST00000542279 CFAP47Q6ZTR5 3102 aa0.28□□□□□ -2.36
GTF2H3-209ENST00000542279 SPRR2BP35325 72 aa0.28□□□□□ -2.36
GTF2H3-209ENST00000542279 RHPN1-AS1Q9BWJ2 59 aa0.28□□□□□ -2.36
GTF2H3-209ENST00000542279 CFAP46Q8IYW2 2715 aa0.28□□□□□ -2.37
GTF2H3-209ENST00000542279 TEX15Q9BXT5 2789 aa0.28□□□□□ -2.37
GTF2H3-209ENST00000542279 CSMD2Q7Z408 3487 aa0.28□□□□□ -2.37
GTF2H3-209ENST00000542279 MT1AP04731 61 aa0.27□□□□□ -2.37
GTF2H3-209ENST00000542279 DCHS1Q96JQ0 3298 aa0.27□□□□□ -2.37
GTF2H3-209ENST00000542279 DMDP11532 3685 aa0.27□□□□□ -2.37
GTF2H3-209ENST00000542279 TGP01266 2768 aa0.27□□□□□ -2.37
GTF2H3-209ENST00000542279 SMG1Q96Q15 3661 aaKnown RBP0.26□□□□□ -2.37
GTF2H3-209ENST00000542279 CMYA5Q8N3K9 4069 aa0.26□□□□□ -2.37
GTF2H3-209ENST00000542279 ITPR2Q14571 2701 aa0.26□□□□□ -2.37
GTF2H3-209ENST00000542279 A0A096LPF7 62 aa0.26□□□□□ -2.37
GTF2H3-209ENST00000542279 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
GTF2H3-209ENST00000542279 FREM2Q5SZK8 3169 aa0.26□□□□□ -2.37
GTF2H3-209ENST00000542279 FAT1Q14517 4588 aa0.25□□□□□ -2.37
GTF2H3-209ENST00000542279 MAP1AP78559 2803 aaPredicted RBP0.25□□□□□ -2.37
GTF2H3-209ENST00000542279 LRP1BQ9NZR2 4599 aa0.25□□□□□ -2.37
GTF2H3-209ENST00000542279 SPRR2FQ96RM1 72 aa0.25□□□□□ -2.37
GTF2H3-209ENST00000542279 PLECQ15149 4684 aaKnown RBP0.25□□□□□ -2.37
GTF2H3-209ENST00000542279 STAB2Q8WWQ8 2551 aa0.25□□□□□ -2.37
GTF2H3-209ENST00000542279 XIRP2A4UGR9 3374 aa0.25□□□□□ -2.37
GTF2H3-209ENST00000542279 LPAP08519 4548 aa0.25□□□□□ -2.37
GTF2H3-209ENST00000542279 NIPBLQ6KC79 2804 aaeCLIP0.24□□□□□ -2.37
GTF2H3-209ENST00000542279 TRRAPQ9Y4A5 3859 aa0.24□□□□□ -2.37
GTF2H3-209ENST00000542279 H3BUX3 64 aa0.24□□□□□ -2.37
GTF2H3-209ENST00000542279 SPRR2EP22531 72 aa0.24□□□□□ -2.37
GTF2H3-209ENST00000542279 SPRR2AP35326 72 aa0.24□□□□□ -2.37
GTF2H3-209ENST00000542279 DEFB124Q8NES8 71 aa0.24□□□□□ -2.37
GTF2H3-209ENST00000542279 CEP350Q5VT06 3117 aa0.24□□□□□ -2.37
GTF2H3-209ENST00000542279 HMCN2Q8NDA2 5059 aa0.23□□□□□ -2.37
GTF2H3-209ENST00000542279 DEFB108BQ8NET1 73 aa0.23□□□□□ -2.37
GTF2H3-209ENST00000542279 MUC3AQ02505 3323 aa0.23□□□□□ -2.37
GTF2H3-209ENST00000542279 WDFY4Q6ZS81 3184 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms