RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
TRPM1-203ENST00000542188 KRTAP10-4P60372 401 aaPredicted RBP5.63□□□□□ -1.51
TRPM1-203ENST00000542188 AKAP9Q99996 3911 aa5.5□□□□□ -1.53
TRPM1-203ENST00000542188 KRTAP10-7P60409 375 aaPredicted RBP5.49□□□□□ -1.53
TRPM1-203ENST00000542188 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
TRPM1-203ENST00000542188 LCE3CQ5T5A8 94 aa5.44□□□□□ -1.54
TRPM1-203ENST00000542188 ZNF469Q96JG9 3925 aaPredicted RBP5.43□□□□□ -1.54
TRPM1-203ENST00000542188 KRTAP4-5Q9BYR2 181 aa5.43□□□□□ -1.54
TRPM1-203ENST00000542188 ALMS1Q8TCU4 4167 aa5.43□□□□□ -1.54
TRPM1-203ENST00000542188 DNAH1Q9P2D7 4330 aa5.39□□□□□ -1.55
TRPM1-203ENST00000542188 DNAH9Q9NYC9 4486 aa5.37□□□□□ -1.55
TRPM1-203ENST00000542188 KRTAP19-5Q3LI72 72 aa5.36□□□□□ -1.55
TRPM1-203ENST00000542188 DNAH10Q8IVF4 4471 aa5.36□□□□□ -1.55
TRPM1-203ENST00000542188 SPRR2GQ9BYE4 73 aa5.32□□□□□ -1.56
TRPM1-203ENST00000542188 DNAH5Q8TE73 4624 aa5.31□□□□□ -1.56
TRPM1-203ENST00000542188 PLECQ15149 4684 aaKnown RBP5.29□□□□□ -1.56
TRPM1-203ENST00000542188 DNAH11Q96DT5 4516 aa5.28□□□□□ -1.56
TRPM1-203ENST00000542188 SPRR2FQ96RM1 72 aa5.27□□□□□ -1.57
TRPM1-203ENST00000542188 DNAH2Q9P225 4427 aa5.27□□□□□ -1.57
TRPM1-203ENST00000542188 MT1HP80294 61 aa5.24□□□□□ -1.57
TRPM1-203ENST00000542188 DNAH17Q9UFH2 4485 aa5.22□□□□□ -1.57
TRPM1-203ENST00000542188 MT2AP02795 61 aa5.21□□□□□ -1.58
TRPM1-203ENST00000542188 DNAH8Q96JB1 4490 aa5.18□□□□□ -1.58
TRPM1-203ENST00000542188 KRTAP4-1Q9BYQ7 146 aa5.17□□□□□ -1.58
TRPM1-203ENST00000542188 VPS13DQ5THJ4 4388 aa5.15□□□□□ -1.58
TRPM1-203ENST00000542188 KRTAP12-4P60329 112 aa5.11□□□□□ -1.59
TRPM1-203ENST00000542188 DNAH3Q8TD57 4116 aa5.11□□□□□ -1.59
TRPM1-203ENST00000542188 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
TRPM1-203ENST00000542188 FAT1Q14517 4588 aa5.07□□□□□ -1.6
TRPM1-203ENST00000542188 ANK2Q01484 3957 aa5.07□□□□□ -1.6
TRPM1-203ENST00000542188 MT1FP04733 61 aa5.05□□□□□ -1.6
TRPM1-203ENST00000542188 STARD9Q9P2P6 4700 aa5.03□□□□□ -1.6
TRPM1-203ENST00000542188 LRP1BQ9NZR2 4599 aa5.02□□□□□ -1.61
TRPM1-203ENST00000542188 DYNC1H1Q14204 4646 aaKnown RBP5□□□□□ -1.61
TRPM1-203ENST00000542188 SACSQ9NZJ4 4579 aa5□□□□□ -1.61
TRPM1-203ENST00000542188 SPRR2EP22531 72 aa4.98□□□□□ -1.61
TRPM1-203ENST00000542188 SPRR2BP35325 72 aa4.98□□□□□ -1.61
TRPM1-203ENST00000542188 SPRR2AP35326 72 aa4.98□□□□□ -1.61
TRPM1-203ENST00000542188 FRAS1Q86XX4 4008 aa4.96□□□□□ -1.62
TRPM1-203ENST00000542188 DYNC2H1Q8NCM8 4307 aaKnown RBP4.95□□□□□ -1.62
TRPM1-203ENST00000542188 VPS13BQ7Z7G8 4022 aa4.93□□□□□ -1.62
TRPM1-203ENST00000542188 LCE3DQ9BYE3 92 aa4.92□□□□□ -1.62
TRPM1-203ENST00000542188 FAT2Q9NYQ8 4349 aa4.92□□□□□ -1.62
TRPM1-203ENST00000542188 KMT2AQ03164 3969 aa4.92□□□□□ -1.62
TRPM1-203ENST00000542188 APOBP04114 4563 aaKnown RBP4.89□□□□□ -1.63
TRPM1-203ENST00000542188 MT1GP13640 62 aa4.88□□□□□ -1.63
TRPM1-203ENST00000542188 LCE3EQ5T5B0 92 aa4.88□□□□□ -1.63
TRPM1-203ENST00000542188 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.64
TRPM1-203ENST00000542188 SPRR2DP22532 72 aa4.84□□□□□ -1.64
TRPM1-203ENST00000542188 KRTAP19-8Q3LI54 63 aa4.83□□□□□ -1.64
TRPM1-203ENST00000542188 DNHD1Q96M86 4753 aa4.83□□□□□ -1.64
TRPM1-203ENST00000542188 LCE2BO14633 110 aa4.81□□□□□ -1.64
TRPM1-203ENST00000542188 LYSTQ99698 3801 aa4.81□□□□□ -1.64
TRPM1-203ENST00000542188 RYR1P21817 5038 aa4.8□□□□□ -1.64
TRPM1-203ENST00000542188 MYCBP2O75592 4640 aa4.78□□□□□ -1.64
TRPM1-203ENST00000542188 PRKDCP78527 4128 aaKnown RBP4.77□□□□□ -1.65
TRPM1-203ENST00000542188 HECTD4Q9Y4D8 3996 aa4.72□□□□□ -1.65
TRPM1-203ENST00000542188 MT1XP80297 61 aa4.71□□□□□ -1.65
TRPM1-203ENST00000542188 CMYA5Q8N3K9 4069 aa4.71□□□□□ -1.65
TRPM1-203ENST00000542188 DNAH6Q9C0G6 4158 aa4.71□□□□□ -1.66
TRPM1-203ENST00000542188 KRTAP19-1Q8IUB9 90 aa4.69□□□□□ -1.66
TRPM1-203ENST00000542188 DNAH7Q8WXX0 4024 aa4.69□□□□□ -1.66
TRPM1-203ENST00000542188 MT3P25713 68 aa4.64□□□□□ -1.67
TRPM1-203ENST00000542188 FAT3Q8TDW7 4589 aa4.63□□□□□ -1.67
TRPM1-203ENST00000542188 LRP1Q07954 4544 aaKnown RBP4.61□□□□□ -1.67
TRPM1-203ENST00000542188 KRTAP17-1Q9BYP8 105 aa4.6□□□□□ -1.67
TRPM1-203ENST00000542188 MT1BP07438 61 aa4.55□□□□□ -1.68
TRPM1-203ENST00000542188 PRM1P04553 51 aa4.55□□□□□ -1.68
TRPM1-203ENST00000542188 RYR3Q15413 4870 aa4.54□□□□□ -1.68
TRPM1-203ENST00000542188 LCE2CQ5TA81 110 aa4.51□□□□□ -1.69
TRPM1-203ENST00000542188 MT1LQ93083 61 aa4.5□□□□□ -1.69
TRPM1-203ENST00000542188 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
TRPM1-203ENST00000542188 KRTAP4-8Q9BYQ9 185 aa4.48□□□□□ -1.69
TRPM1-203ENST00000542188 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
TRPM1-203ENST00000542188 LCE2DQ5TA82 110 aaPredicted RBP4.44□□□□□ -1.7
TRPM1-203ENST00000542188 KIAA1109Q2LD37 5005 aa4.43□□□□□ -1.7
TRPM1-203ENST00000542188 LRP2P98164 4655 aa4.42□□□□□ -1.7
TRPM1-203ENST00000542188 KRTAP9-8Q9BYQ0 159 aa4.39□□□□□ -1.71
TRPM1-203ENST00000542188 HERC1Q15751 4861 aa4.39□□□□□ -1.71
TRPM1-203ENST00000542188 RYR2Q92736 4967 aa4.38□□□□□ -1.71
TRPM1-203ENST00000542188 HYDINQ4G0P3 5121 aa4.35□□□□□ -1.71
TRPM1-203ENST00000542188 LPAP08519 4548 aa4.35□□□□□ -1.71
TRPM1-203ENST00000542188 PKHD1P08F94 4074 aa4.32□□□□□ -1.72
TRPM1-203ENST00000542188 KRTAP9-3Q9BYQ3 159 aa4.31□□□□□ -1.72
TRPM1-203ENST00000542188 HSPG2P98160 4391 aa4.31□□□□□ -1.72
TRPM1-203ENST00000542188 MT1EP04732 61 aa4.31□□□□□ -1.72
TRPM1-203ENST00000542188 PKD1P98161 4303 aa4.3□□□□□ -1.72
TRPM1-203ENST00000542188 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
TRPM1-203ENST00000542188 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
TRPM1-203ENST00000542188 PKHD1L1Q86WI1 4243 aa4.23□□□□□ -1.73
TRPM1-203ENST00000542188 KRTAP19-2Q3LHN2 52 aa4.23□□□□□ -1.73
TRPM1-203ENST00000542188 LCE1DQ5T752 114 aa4.23□□□□□ -1.73
TRPM1-203ENST00000542188 MT1MQ8N339 61 aa4.22□□□□□ -1.73
TRPM1-203ENST00000542188 MT4P47944 62 aa4.2□□□□□ -1.74
TRPM1-203ENST00000542188 KMT2CQ8NEZ4 4911 aaKnown RBP4.2□□□□□ -1.74
TRPM1-203ENST00000542188 TNXBP22105 4242 aa4.2□□□□□ -1.74
TRPM1-203ENST00000542188 HERC2O95714 4834 aa4.14□□□□□ -1.75
TRPM1-203ENST00000542188 MUC17Q685J3 4493 aa4.11□□□□□ -1.75
TRPM1-203ENST00000542188 LOC100996750A0A140TA64 210 aa4.09□□□□□ -1.75
TRPM1-203ENST00000542188 FLGP20930 4061 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms