RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 PELP1Q8IZL8 1130 aaKnown RBP23.36■■□□□ 1.33
TRPM1-203ENST00000542188 DCAF8L2P0C7V8 631 aa22.99■■□□□ 1.27
TRPM1-203ENST00000542188 ERICH6Q7L0X2 663 aa22.38■■□□□ 1.17
TRPM1-203ENST00000542188 CCER1Q8TC90 406 aaPredicted RBP22.26■■□□□ 1.15
TRPM1-203ENST00000542188 MYT1Q01538 1121 aa22.26■■□□□ 1.15
TRPM1-203ENST00000542188 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
TRPM1-203ENST00000542188 CENPBP07199 599 aaPredicted RBP21.91■■□□□ 1.1
TRPM1-203ENST00000542188 APLP2Q06481 763 aa21.86■■□□□ 1.09
TRPM1-203ENST00000542188 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
TRPM1-203ENST00000542188 NEFLP07196 543 aa21.5■■□□□ 1.03
TRPM1-203ENST00000542188 ZEB1P37275 1124 aaPredicted RBP21.49■■□□□ 1.03
TRPM1-203ENST00000542188 FAM9AQ8IZU1 332 aaPredicted RBP21.49■■□□□ 1.03
TRPM1-203ENST00000542188 YTHDC1Q96MU7 727 aaKnown RBP21.31■■□□□ 1
TRPM1-203ENST00000542188 PCGF6Q9BYE7 350 aa21.27■■□□□ 1
TRPM1-203ENST00000542188 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
TRPM1-203ENST00000542188 DAXXQ9UER7 740 aaPredicted RBP21.17■□□□□ 0.98
TRPM1-203ENST00000542188 TTBK1Q5TCY1 1321 aaPredicted RBP21.09■□□□□ 0.97
TRPM1-203ENST00000542188 NISCHQ9Y2I1 1504 aa20.76■□□□□ 0.91
TRPM1-203ENST00000542188 RTL5Q5HYW3 569 aaPredicted RBP20.73■□□□□ 0.91
TRPM1-203ENST00000542188 ATP1B4Q9UN42 357 aaPredicted RBP20.68■□□□□ 0.9
TRPM1-203ENST00000542188 RANGAP1P46060 587 aaPredicted RBP20.63■□□□□ 0.89
TRPM1-203ENST00000542188 ZNF316A6NFI3 1004 aaPredicted RBP20.61■□□□□ 0.89
TRPM1-203ENST00000542188 TRIM41Q8WV44 630 aa20.48■□□□□ 0.87
TRPM1-203ENST00000542188 UBTFP17480 764 aaKnown RBP20.42■□□□□ 0.86
TRPM1-203ENST00000542188 CLSPNQ9HAW4 1339 aa20.34■□□□□ 0.85
TRPM1-203ENST00000542188 POLR3GLQ9BT43 218 aa20.28■□□□□ 0.84
TRPM1-203ENST00000542188 TRIM26Q12899 539 aaPredicted RBP20.25■□□□□ 0.83
TRPM1-203ENST00000542188 HRCP23327 699 aa20.25■□□□□ 0.83
TRPM1-203ENST00000542188 MYT1LQ9UL68 1186 aa20.01■□□□□ 0.79
TRPM1-203ENST00000542188 PPARGC1BQ86YN6 1023 aaKnown RBP19.98■□□□□ 0.79
TRPM1-203ENST00000542188 CDK11AQ9UQ88 783 aaPredicted RBP19.97■□□□□ 0.79
TRPM1-203ENST00000542188 CNGB1Q14028 1251 aaPredicted RBP19.95■□□□□ 0.78
TRPM1-203ENST00000542188 GLIPR1L2Q4G1C9 344 aa19.94■□□□□ 0.78
TRPM1-203ENST00000542188 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
TRPM1-203ENST00000542188 ZBTB47Q9UFB7 747 aaPredicted RBP19.94■□□□□ 0.78
TRPM1-203ENST00000542188 ITGAEP38570 1179 aa19.91■□□□□ 0.78
TRPM1-203ENST00000542188 DIEXFQ68CQ4 756 aaKnown RBP19.88■□□□□ 0.77
TRPM1-203ENST00000542188 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.8■□□□□ 0.76
TRPM1-203ENST00000542188 HNRNPUL2Q1KMD3 747 aaKnown RBP19.8■□□□□ 0.76
TRPM1-203ENST00000542188 EIF5BO60841 1220 aaKnown RBP19.78■□□□□ 0.76
TRPM1-203ENST00000542188 ANP32BQ92688 251 aaKnown RBP19.77■□□□□ 0.75
TRPM1-203ENST00000542188 BCANQ96GW7 911 aa19.74■□□□□ 0.75
TRPM1-203ENST00000542188 ANP32AP39687 249 aaKnown RBP19.73■□□□□ 0.75
TRPM1-203ENST00000542188 GTF3C3Q9Y5Q9 886 aa19.69■□□□□ 0.74
TRPM1-203ENST00000542188 CANXP27824 592 aaKnown RBP19.61■□□□□ 0.73
TRPM1-203ENST00000542188 ANP32CO43423 234 aa19.61■□□□□ 0.73
TRPM1-203ENST00000542188 CHIC1Q5VXU3 224 aa19.57■□□□□ 0.72
TRPM1-203ENST00000542188 NEFMP07197 916 aa19.44■□□□□ 0.7
TRPM1-203ENST00000542188 NPM2Q86SE8 214 aaKnown RBP19.42■□□□□ 0.7
TRPM1-203ENST00000542188 TRIM52Q96A61 297 aa19.41■□□□□ 0.7
TRPM1-203ENST00000542188 HSP90AA1P07900 732 aaKnown RBP19.39■□□□□ 0.69
TRPM1-203ENST00000542188 BCL11AQ9H165 835 aa19.37■□□□□ 0.69
TRPM1-203ENST00000542188 FAM50AQ14320 339 aaKnown RBP19.35■□□□□ 0.69
TRPM1-203ENST00000542188 UPF2Q9HAU5 1272 aaKnown RBP19.35■□□□□ 0.69
TRPM1-203ENST00000542188 SLC24A1O60721 1099 aa19.35■□□□□ 0.69
TRPM1-203ENST00000542188 NEUROD1Q13562 356 aa19.34■□□□□ 0.69
TRPM1-203ENST00000542188 ACIN1Q9UKV3 1341 aaKnown RBP19.31■□□□□ 0.68
TRPM1-203ENST00000542188 LOC105371045A0A1W2PR82 267 aa19.28■□□□□ 0.68
TRPM1-203ENST00000542188 ZNF326Q5BKZ1 582 aaKnown RBP19.22■□□□□ 0.67
TRPM1-203ENST00000542188 TNNT2P45379 298 aaPredicted RBP19.21■□□□□ 0.67
TRPM1-203ENST00000542188 CDK11BP21127 795 aaKnown RBP19.17■□□□□ 0.66
TRPM1-203ENST00000542188 FKBP8Q14318 412 aa19.09■□□□□ 0.65
TRPM1-203ENST00000542188 NBR1Q14596 966 aa19.08■□□□□ 0.64
TRPM1-203ENST00000542188 ANP32EQ9BTT0 268 aa19.01■□□□□ 0.63
TRPM1-203ENST00000542188 TRIM44Q96DX7 344 aaPredicted RBP19■□□□□ 0.63
TRPM1-203ENST00000542188 ARXQ96QS3 562 aa18.99■□□□□ 0.63
TRPM1-203ENST00000542188 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.98■□□□□ 0.63
TRPM1-203ENST00000542188 NCLP19338 710 aaKnown RBP18.92■□□□□ 0.62
TRPM1-203ENST00000542188 CCDC136Q96JN2 1154 aa18.91■□□□□ 0.62
TRPM1-203ENST00000542188 DDRGK1Q96HY6 314 aa18.91■□□□□ 0.62
TRPM1-203ENST00000542188 BECN1Q14457 450 aa18.86■□□□□ 0.61
TRPM1-203ENST00000542188 GOLGA6L22H0YM25 854 aa18.85■□□□□ 0.61
TRPM1-203ENST00000542188 HNRNPUQ00839 825 aaKnown RBP eCLIP18.85■□□□□ 0.61
TRPM1-203ENST00000542188 ERICH6BQ5W0A0 696 aa18.8■□□□□ 0.6
TRPM1-203ENST00000542188 PTMAP06454 111 aaKnown RBP18.79■□□□□ 0.6
TRPM1-203ENST00000542188 MYH16Q9H6N6 1097 aa18.78■□□□□ 0.6
TRPM1-203ENST00000542188 DNTTIP2Q5QJE6 756 aaKnown RBP18.76■□□□□ 0.59
TRPM1-203ENST00000542188 FAM9BQ8IZU0 186 aa18.74■□□□□ 0.59
TRPM1-203ENST00000542188 ZRSR1Q15695 479 aaKnown RBP18.73■□□□□ 0.59
TRPM1-203ENST00000542188 NAP1L5Q96NT1 182 aaPredicted RBP18.72■□□□□ 0.59
TRPM1-203ENST00000542188 TONSLQ96HA7 1378 aa18.68■□□□□ 0.58
TRPM1-203ENST00000542188 WDR43Q15061 677 aaKnown RBP eCLIP18.67■□□□□ 0.58
TRPM1-203ENST00000542188 TMC1Q8TDI8 760 aa18.65■□□□□ 0.58
TRPM1-203ENST00000542188 PPM1GO15355 546 aaPredicted RBP18.65■□□□□ 0.58
TRPM1-203ENST00000542188 GOLGA6L6A8MZA4 724 aa18.63■□□□□ 0.57
TRPM1-203ENST00000542188 SALL2Q9Y467 1007 aaPredicted RBP18.6■□□□□ 0.57
TRPM1-203ENST00000542188 DDX10Q13206 875 aaKnown RBP18.56■□□□□ 0.56
TRPM1-203ENST00000542188 CASC1Q6TDU7 716 aa18.55■□□□□ 0.56
TRPM1-203ENST00000542188 ESF1Q9H501 851 aaKnown RBP18.54■□□□□ 0.56
TRPM1-203ENST00000542188 NRDCO43847 1150 aa18.53■□□□□ 0.56
TRPM1-203ENST00000542188 STAG3Q9UJ98 1225 aa18.52■□□□□ 0.55
TRPM1-203ENST00000542188 MRS2Q9HD23 443 aa18.5■□□□□ 0.55
TRPM1-203ENST00000542188 CHAF1AQ13111 956 aaPredicted RBP18.5■□□□□ 0.55
TRPM1-203ENST00000542188 ZNF777Q9ULD5 760 aaPredicted RBP18.48■□□□□ 0.55
TRPM1-203ENST00000542188 CHGAP10645 457 aaKnown RBP18.46■□□□□ 0.55
TRPM1-203ENST00000542188 IRX6P78412 446 aaPredicted RBP18.43■□□□□ 0.54
TRPM1-203ENST00000542188 RTN4Q9NQC3 1192 aaKnown RBP18.42■□□□□ 0.54
TRPM1-203ENST00000542188 L1TD1Q5T7N2 865 aaKnown RBP18.42■□□□□ 0.54
TRPM1-203ENST00000542188 FBLN2P98095 1184 aa18.41■□□□□ 0.54
TRPM1-203ENST00000542188 SCAF1Q9H7N4 1312 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms