RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 FAT1Q14517 4588 aa5.43□□□□□ -1.54
ERBB2-204ENST00000541774 CMYA5Q8N3K9 4069 aa5.41□□□□□ -1.54
ERBB2-204ENST00000541774 M0R2T5 61 aa5.41□□□□□ -1.54
ERBB2-204ENST00000541774 DNAH7Q8WXX0 4024 aa5.37□□□□□ -1.55
ERBB2-204ENST00000541774 PRO2289Q9P1D8 64 aa5.37□□□□□ -1.55
ERBB2-204ENST00000541774 VPS13DQ5THJ4 4388 aa5.35□□□□□ -1.55
ERBB2-204ENST00000541774 KRTAP3-2Q9BYR7 98 aa5.32□□□□□ -1.56
ERBB2-204ENST00000541774 LRP1BQ9NZR2 4599 aa5.32□□□□□ -1.56
ERBB2-204ENST00000541774 KIAA1109Q2LD37 5005 aa5.31□□□□□ -1.56
ERBB2-204ENST00000541774 KRTAP4-5Q9BYR2 181 aa5.31□□□□□ -1.56
ERBB2-204ENST00000541774 DNAH8Q96JB1 4490 aa5.3□□□□□ -1.56
ERBB2-204ENST00000541774 DNAH3Q8TD57 4116 aa5.29□□□□□ -1.56
ERBB2-204ENST00000541774 DYNC1H1Q14204 4646 aaKnown RBP5.29□□□□□ -1.56
ERBB2-204ENST00000541774 INE1O15225 51 aa5.27□□□□□ -1.57
ERBB2-204ENST00000541774 HYDINQ4G0P3 5121 aa5.27□□□□□ -1.57
ERBB2-204ENST00000541774 RYR1P21817 5038 aa5.24□□□□□ -1.57
ERBB2-204ENST00000541774 DNAH2Q9P225 4427 aa5.23□□□□□ -1.57
ERBB2-204ENST00000541774 KRTAP3-3Q9BYR6 98 aa5.23□□□□□ -1.57
ERBB2-204ENST00000541774 DNAH6Q9C0G6 4158 aa5.23□□□□□ -1.57
ERBB2-204ENST00000541774 DNAH17Q9UFH2 4485 aa5.21□□□□□ -1.57
ERBB2-204ENST00000541774 MYCBP2O75592 4640 aa5.21□□□□□ -1.57
ERBB2-204ENST00000541774 KRTAP10-4P60372 401 aaPredicted RBP5.2□□□□□ -1.58
ERBB2-204ENST00000541774 KMT2CQ8NEZ4 4911 aaKnown RBP5.2□□□□□ -1.58
ERBB2-204ENST00000541774 RYR3Q15413 4870 aa5.19□□□□□ -1.58
ERBB2-204ENST00000541774 FRAS1Q86XX4 4008 aa5.17□□□□□ -1.58
ERBB2-204ENST00000541774 DYNC2H1Q8NCM8 4307 aaKnown RBP5.16□□□□□ -1.58
ERBB2-204ENST00000541774 MT1HL1P0DM35 61 aa5.15□□□□□ -1.58
ERBB2-204ENST00000541774 FAT3Q8TDW7 4589 aa5.15□□□□□ -1.59
ERBB2-204ENST00000541774 PKHD1P08F94 4074 aa5.15□□□□□ -1.59
ERBB2-204ENST00000541774 VPS13BQ7Z7G8 4022 aa5.14□□□□□ -1.59
ERBB2-204ENST00000541774 SACSQ9NZJ4 4579 aa5.14□□□□□ -1.59
ERBB2-204ENST00000541774 LRP1Q07954 4544 aaKnown RBP5.13□□□□□ -1.59
ERBB2-204ENST00000541774 ALMS1Q8TCU4 4167 aa5.11□□□□□ -1.59
ERBB2-204ENST00000541774 APOBP04114 4563 aaKnown RBP5.11□□□□□ -1.59
ERBB2-204ENST00000541774 HECTD4Q9Y4D8 3996 aa5.06□□□□□ -1.6
ERBB2-204ENST00000541774 RYR2Q92736 4967 aa5.04□□□□□ -1.6
ERBB2-204ENST00000541774 KRTAP17-1Q9BYP8 105 aa5.02□□□□□ -1.61
ERBB2-204ENST00000541774 FAT2Q9NYQ8 4349 aa5.02□□□□□ -1.61
ERBB2-204ENST00000541774 EPPK1P58107 5090 aaKnown RBP4.91□□□□□ -1.62
ERBB2-204ENST00000541774 HERC2O95714 4834 aa4.91□□□□□ -1.62
ERBB2-204ENST00000541774 LRP2P98164 4655 aa4.88□□□□□ -1.63
ERBB2-204ENST00000541774 KRTAP10-10P60014 251 aa4.86□□□□□ -1.63
ERBB2-204ENST00000541774 PKD1P98161 4303 aa4.85□□□□□ -1.63
ERBB2-204ENST00000541774 HSPG2P98160 4391 aa4.8□□□□□ -1.64
ERBB2-204ENST00000541774 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
ERBB2-204ENST00000541774 LORP23490 312 aaPredicted RBP4.78□□□□□ -1.64
ERBB2-204ENST00000541774 KRTAP4-1Q9BYQ7 146 aa4.74□□□□□ -1.65
ERBB2-204ENST00000541774 LPAP08519 4548 aa4.72□□□□□ -1.65
ERBB2-204ENST00000541774 ABCA13Q86UQ4 5058 aa4.72□□□□□ -1.65
ERBB2-204ENST00000541774 BIRC6Q9NR09 4857 aa4.67□□□□□ -1.66
ERBB2-204ENST00000541774 LCE3AQ5TA76 89 aa4.66□□□□□ -1.66
ERBB2-204ENST00000541774 PCLOQ9Y6V0 5065 aa4.66□□□□□ -1.66
ERBB2-204ENST00000541774 KRTAP12-3P60328 96 aa4.61□□□□□ -1.67
ERBB2-204ENST00000541774 HERC1Q15751 4861 aa4.61□□□□□ -1.67
ERBB2-204ENST00000541774 MUC2Q02817 5179 aa4.58□□□□□ -1.68
ERBB2-204ENST00000541774 RNF213Q63HN8 5207 aa4.57□□□□□ -1.68
ERBB2-204ENST00000541774 PKHD1L1Q86WI1 4243 aa4.54□□□□□ -1.68
ERBB2-204ENST00000541774 KRTAP10-12P60413 245 aa4.54□□□□□ -1.68
ERBB2-204ENST00000541774 UBR4Q5T4S7 5183 aa4.47□□□□□ -1.69
ERBB2-204ENST00000541774 TNXBP22105 4242 aa4.47□□□□□ -1.69
ERBB2-204ENST00000541774 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
ERBB2-204ENST00000541774 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
ERBB2-204ENST00000541774 FAT4Q6V0I7 4981 aa4.43□□□□□ -1.7
ERBB2-204ENST00000541774 MT1HP80294 61 aa4.39□□□□□ -1.71
ERBB2-204ENST00000541774 MT2AP02795 61 aa4.29□□□□□ -1.72
ERBB2-204ENST00000541774 MT1FP04733 61 aa4.28□□□□□ -1.72
ERBB2-204ENST00000541774 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
ERBB2-204ENST00000541774 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
ERBB2-204ENST00000541774 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
ERBB2-204ENST00000541774 HMCN2Q8NDA2 5059 aa4.23□□□□□ -1.73
ERBB2-204ENST00000541774 LCE2CQ5TA81 110 aa4.19□□□□□ -1.74
ERBB2-204ENST00000541774 MUC17Q685J3 4493 aa4.14□□□□□ -1.75
ERBB2-204ENST00000541774 KRTAP19-2Q3LHN2 52 aa4.13□□□□□ -1.75
ERBB2-204ENST00000541774 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
ERBB2-204ENST00000541774 KRTAP19-1Q8IUB9 90 aa4.12□□□□□ -1.75
ERBB2-204ENST00000541774 SPRR2GQ9BYE4 73 aa4.1□□□□□ -1.75
ERBB2-204ENST00000541774 KRTAP9-8Q9BYQ0 159 aa4.08□□□□□ -1.76
ERBB2-204ENST00000541774 FLGP20930 4061 aaPredicted RBP4.07□□□□□ -1.76
ERBB2-204ENST00000541774 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
ERBB2-204ENST00000541774 KRTAP12-4P60329 112 aa4□□□□□ -1.77
ERBB2-204ENST00000541774 USH2AO75445 5202 aa3.99□□□□□ -1.77
ERBB2-204ENST00000541774 MT1BP07438 61 aa3.94□□□□□ -1.78
ERBB2-204ENST00000541774 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
ERBB2-204ENST00000541774 KRTAP9-3Q9BYQ3 159 aa3.92□□□□□ -1.78
ERBB2-204ENST00000541774 LCE2BO14633 110 aa3.89□□□□□ -1.79
ERBB2-204ENST00000541774 KRTAP19-8Q3LI54 63 aa3.88□□□□□ -1.79
ERBB2-204ENST00000541774 MT1XP80297 61 aa3.88□□□□□ -1.79
ERBB2-204ENST00000541774 KRTAP4-8A0A0G2JLE6 195 aa3.86□□□□□ -1.79
ERBB2-204ENST00000541774 KRTAP4-8Q9BYQ9 185 aa3.86□□□□□ -1.79
ERBB2-204ENST00000541774 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
ERBB2-204ENST00000541774 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
ERBB2-204ENST00000541774 LCE2AQ5TA79 106 aaPredicted RBP3.77□□□□□ -1.81
ERBB2-204ENST00000541774 KMT2DO14686 5537 aa3.76□□□□□ -1.81
ERBB2-204ENST00000541774 SPRR2FQ96RM1 72 aa3.76□□□□□ -1.81
ERBB2-204ENST00000541774 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
ERBB2-204ENST00000541774 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
ERBB2-204ENST00000541774 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
ERBB2-204ENST00000541774 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
ERBB2-204ENST00000541774 FCGBPQ9Y6R7 5405 aaPredicted RBP3.62□□□□□ -1.83
ERBB2-204ENST00000541774 MT1GP13640 62 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms