RNA–Protein interactions for RNA: ENST00000540875.1

AC090023.2-201, humanhuman

TSL 3 BASIC

Gene AC090023.2, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090023.2-201ENST00000540875 CSMD3Q7Z407 3707 aa2.86□□□□□ -1.95
AC090023.2-201ENST00000540875 K7EIL1 84 aa2.86□□□□□ -1.95
AC090023.2-201ENST00000540875 CIRBP-AS1Q8TBR5 109 aa2.86□□□□□ -1.95
AC090023.2-201ENST00000540875 CRIPTQ9P021 101 aa2.86□□□□□ -1.95
AC090023.2-201ENST00000540875 MUC2Q02817 5179 aa2.85□□□□□ -1.95
AC090023.2-201ENST00000540875 MT3P25713 68 aa2.85□□□□□ -1.95
AC090023.2-201ENST00000540875 RPL37P61927 97 aaKnown RBP2.85□□□□□ -1.95
AC090023.2-201ENST00000540875 LYSTQ99698 3801 aa2.85□□□□□ -1.95
AC090023.2-201ENST00000540875 FRAS1Q86XX4 4008 aa2.85□□□□□ -1.95
AC090023.2-201ENST00000540875 ABCA13Q86UQ4 5058 aa2.84□□□□□ -1.95
AC090023.2-201ENST00000540875 C14orf177Q52M58 125 aa2.84□□□□□ -1.95
AC090023.2-201ENST00000540875 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.95
AC090023.2-201ENST00000540875 HERC1Q15751 4861 aa2.84□□□□□ -1.96
AC090023.2-201ENST00000540875 STAB2Q8WWQ8 2551 aa2.84□□□□□ -1.96
AC090023.2-201ENST00000540875 DNAH3Q8TD57 4116 aa2.83□□□□□ -1.96
AC090023.2-201ENST00000540875 TPRXLQ17RH7 258 aa2.83□□□□□ -1.96
AC090023.2-201ENST00000540875 HTN3P15516 51 aa2.82□□□□□ -1.96
AC090023.2-201ENST00000540875 DEFB135Q30KP9 77 aa2.82□□□□□ -1.96
AC090023.2-201ENST00000540875 A0A096LNI7 61 aa2.81□□□□□ -1.96
AC090023.2-201ENST00000540875 DNAH7Q8WXX0 4024 aa2.79□□□□□ -1.96
AC090023.2-201ENST00000540875 KRTAP10-3P60369 221 aa2.79□□□□□ -1.96
AC090023.2-201ENST00000540875 HECTD4Q9Y4D8 3996 aa2.77□□□□□ -1.97
AC090023.2-201ENST00000540875 HUWE1Q7Z6Z7 4374 aaKnown RBP2.77□□□□□ -1.97
AC090023.2-201ENST00000540875 STARD9Q9P2P6 4700 aa2.77□□□□□ -1.97
AC090023.2-201ENST00000540875 PLECQ15149 4684 aaKnown RBP2.77□□□□□ -1.97
AC090023.2-201ENST00000540875 DEFB4AO15263 64 aa2.76□□□□□ -1.97
AC090023.2-201ENST00000540875 TYMSOSQ8TAI1 123 aa2.76□□□□□ -1.97
AC090023.2-201ENST00000540875 DNAH10Q8IVF4 4471 aa2.75□□□□□ -1.97
AC090023.2-201ENST00000540875 SPINK1P00995 79 aa2.74□□□□□ -1.97
AC090023.2-201ENST00000540875 PLAC4Q8WY50 150 aa2.74□□□□□ -1.97
AC090023.2-201ENST00000540875 SPINK6Q6UWN8 80 aa2.73□□□□□ -1.97
AC090023.2-201ENST00000540875 KRTAP10-6P60371 365 aaPredicted RBP2.72□□□□□ -1.97
AC090023.2-201ENST00000540875 PRO2289Q9P1D8 64 aa2.72□□□□□ -1.97
AC090023.2-201ENST00000540875 DYNC1H1Q14204 4646 aaKnown RBP2.7□□□□□ -1.98
AC090023.2-201ENST00000540875 PKHD1P08F94 4074 aa2.69□□□□□ -1.98
AC090023.2-201ENST00000540875 HSPG2P98160 4391 aa2.69□□□□□ -1.98
AC090023.2-201ENST00000540875 KRTAP10-7P60409 375 aaPredicted RBP2.68□□□□□ -1.98
AC090023.2-201ENST00000540875 SPACA4Q8TDM5 124 aa2.68□□□□□ -1.98
AC090023.2-201ENST00000540875 C10orf95Q9H7T3 257 aa2.68□□□□□ -1.98
AC090023.2-201ENST00000540875 S4R3F8 94 aa2.67□□□□□ -1.98
AC090023.2-201ENST00000540875 Q6ZRN7 208 aaPredicted RBP2.66□□□□□ -1.98
AC090023.2-201ENST00000540875 DNAH11Q96DT5 4516 aa2.66□□□□□ -1.98
AC090023.2-201ENST00000540875 VPS13DQ5THJ4 4388 aa2.65□□□□□ -1.98
AC090023.2-201ENST00000540875 KMT2AQ03164 3969 aa2.65□□□□□ -1.98
AC090023.2-201ENST00000540875 INE1O15225 51 aa2.65□□□□□ -1.99
AC090023.2-201ENST00000540875 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
AC090023.2-201ENST00000540875 FAT2Q9NYQ8 4349 aa2.64□□□□□ -1.99
AC090023.2-201ENST00000540875 RPS29P62273 56 aaKnown RBP2.64□□□□□ -1.99
AC090023.2-201ENST00000540875 PP632Q6XCG6 107 aa2.64□□□□□ -1.99
AC090023.2-201ENST00000540875 DMBT1Q9UGM3 2413 aaPredicted RBP2.64□□□□□ -1.99
AC090023.2-201ENST00000540875 DNAH2Q9P225 4427 aa2.63□□□□□ -1.99
AC090023.2-201ENST00000540875 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
AC090023.2-201ENST00000540875 UBE2DNLQ8IWF7 75 aa2.61□□□□□ -1.99
AC090023.2-201ENST00000540875 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
AC090023.2-201ENST00000540875 APLNQ9ULZ1 77 aa2.6□□□□□ -1.99
AC090023.2-201ENST00000540875 HMCN2Q8NDA2 5059 aa2.6□□□□□ -1.99
AC090023.2-201ENST00000540875 PKD1P98161 4303 aa2.59□□□□□ -1.99
AC090023.2-201ENST00000540875 SRRM2Q9UQ35 2752 aaKnown RBP2.59□□□□□ -1.99
AC090023.2-201ENST00000540875 M0QZ58 72 aa2.58□□□□□ -2
AC090023.2-201ENST00000540875 KRTAP10-12P60413 245 aa2.58□□□□□ -2
AC090023.2-201ENST00000540875 KRTAP13-4Q3LI77 160 aa2.58□□□□□ -2
AC090023.2-201ENST00000540875 RNF213Q63HN8 5207 aa2.58□□□□□ -2
AC090023.2-201ENST00000540875 MYCBP2O75592 4640 aa2.57□□□□□ -2
AC090023.2-201ENST00000540875 DNAH17Q9UFH2 4485 aa2.57□□□□□ -2
AC090023.2-201ENST00000540875 A0A1B0GVY2 172 aa2.57□□□□□ -2
AC090023.2-201ENST00000540875 KRTAP12-1P59990 96 aa2.57□□□□□ -2
AC090023.2-201ENST00000540875 APOBP04114 4563 aaKnown RBP2.57□□□□□ -2
AC090023.2-201ENST00000540875 A0A0D9SG42 100 aa2.56□□□□□ -2
AC090023.2-201ENST00000540875 KRTAP12-2P59991 146 aa2.56□□□□□ -2
AC090023.2-201ENST00000540875 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
AC090023.2-201ENST00000540875 DNAH6Q9C0G6 4158 aa2.55□□□□□ -2
AC090023.2-201ENST00000540875 LRP1BQ9NZR2 4599 aa2.55□□□□□ -2
AC090023.2-201ENST00000540875 SPRR5A0A1B0GTR4 108 aa2.54□□□□□ -2
AC090023.2-201ENST00000540875 KRTAP5-9P26371 169 aa2.54□□□□□ -2
AC090023.2-201ENST00000540875 FLG2Q5D862 2391 aaPredicted RBP2.53□□□□□ -2
AC090023.2-201ENST00000540875 KRTAP5-4Q6L8H1 288 aa2.53□□□□□ -2
AC090023.2-201ENST00000540875 R4GN34 69 aa2.53□□□□□ -2
AC090023.2-201ENST00000540875 FAT1Q14517 4588 aa2.52□□□□□ -2.01
AC090023.2-201ENST00000540875 KRTAP10-5P60370 271 aa2.51□□□□□ -2.01
AC090023.2-201ENST00000540875 KRTAP13-2Q52LG2 175 aa2.51□□□□□ -2.01
AC090023.2-201ENST00000540875 DNAH5Q8TE73 4624 aa2.5□□□□□ -2.01
AC090023.2-201ENST00000540875 FSIP2Q5CZC0 6907 aa2.49□□□□□ -2.01
AC090023.2-201ENST00000540875 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
AC090023.2-201ENST00000540875 LCE3CQ5T5A8 94 aa2.47□□□□□ -2.01
AC090023.2-201ENST00000540875 FAT4Q6V0I7 4981 aa2.45□□□□□ -2.02
AC090023.2-201ENST00000540875 VPS13BQ7Z7G8 4022 aa2.45□□□□□ -2.02
AC090023.2-201ENST00000540875 LRP2P98164 4655 aa2.44□□□□□ -2.02
AC090023.2-201ENST00000540875 KRTAP1-4P0C5Y4 121 aa2.44□□□□□ -2.02
AC090023.2-201ENST00000540875 Q5VSD8 79 aa2.43□□□□□ -2.02
AC090023.2-201ENST00000540875 PKHD1L1Q86WI1 4243 aa2.41□□□□□ -2.02
AC090023.2-201ENST00000540875 MACF1Q9UPN3 7388 aaKnown RBP2.41□□□□□ -2.02
AC090023.2-201ENST00000540875 NEBP20929 6669 aa2.4□□□□□ -2.03
AC090023.2-201ENST00000540875 LRP1Q07954 4544 aaKnown RBP2.39□□□□□ -2.03
AC090023.2-201ENST00000540875 KRTAP9-6A8MVA2 160 aa2.38□□□□□ -2.03
AC090023.2-201ENST00000540875 KRTAP10-8P60410 259 aa2.38□□□□□ -2.03
AC090023.2-201ENST00000540875 FAT3Q8TDW7 4589 aa2.37□□□□□ -2.03
AC090023.2-201ENST00000540875 DNAH8Q96JB1 4490 aa2.36□□□□□ -2.03
AC090023.2-201ENST00000540875 SYNE2Q8WXH0 6885 aaKnown RBP2.36□□□□□ -2.03
AC090023.2-201ENST00000540875 CRCT1Q9UGL9 99 aa2.36□□□□□ -2.03
AC090023.2-201ENST00000540875 SMR3BP02814 79 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms