RNA–Protein interactions for RNA: ENST00000540875.1

AC090023.2-201, humanhuman

TSL 3 BASIC

Gene AC090023.2, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090023.2-201ENST00000540875 AEBP2Q6ZN18 517 aaPredicted RBP16.45■□□□□ 0.22
AC090023.2-201ENST00000540875 CHIC1Q5VXU3 224 aa16.1■□□□□ 0.17
AC090023.2-201ENST00000540875 PHF23Q9BUL5 403 aaPredicted RBP14.21□□□□□ -0.13
AC090023.2-201ENST00000540875 SENP3Q9H4L4 574 aaPredicted RBP13.88□□□□□ -0.19
AC090023.2-201ENST00000540875 PLPPR3Q6T4P5 718 aa13.08□□□□□ -0.32
AC090023.2-201ENST00000540875 FOXD1Q16676 465 aa12.93□□□□□ -0.34
AC090023.2-201ENST00000540875 PPP6R1Q9UPN7 881 aa12.53□□□□□ -0.4
AC090023.2-201ENST00000540875 ADRA2BP18089 450 aa12.5□□□□□ -0.41
AC090023.2-201ENST00000540875 PIAS4Q8N2W9 510 aaPredicted RBP12.15□□□□□ -0.46
AC090023.2-201ENST00000540875 POTEDQ86YR6 584 aa12.1□□□□□ -0.47
AC090023.2-201ENST00000540875 MSH5O43196 834 aa11.83□□□□□ -0.52
AC090023.2-201ENST00000540875 PPP4R3CPQ6ZMV5 832 aa11.57□□□□□ -0.56
AC090023.2-201ENST00000540875 SCAF1Q9H7N4 1312 aaKnown RBP11.39□□□□□ -0.59
AC090023.2-201ENST00000540875 KCNA4P22459 653 aa11.38□□□□□ -0.59
AC090023.2-201ENST00000540875 MAPK8IP2Q13387 824 aaPredicted RBP11.34□□□□□ -0.59
AC090023.2-201ENST00000540875 NCBP3Q53F19 620 aaKnown RBP11.24□□□□□ -0.61
AC090023.2-201ENST00000540875 CNKSR2Q8WXI2 1034 aa11.21□□□□□ -0.61
AC090023.2-201ENST00000540875 NPM3O75607 178 aaKnown RBP11.11□□□□□ -0.63
AC090023.2-201ENST00000540875 DMRT2Q9Y5R5 561 aa11.11□□□□□ -0.63
AC090023.2-201ENST00000540875 RNF216Q9NWF9 866 aaPredicted RBP10.97□□□□□ -0.65
AC090023.2-201ENST00000540875 HOXD11P31277 338 aaPredicted RBP10.93□□□□□ -0.66
AC090023.2-201ENST00000540875 SLC4A1APQ9BWU0 796 aaKnown RBP10.82□□□□□ -0.68
AC090023.2-201ENST00000540875 DNAJC5BQ9UF47 199 aa10.78□□□□□ -0.68
AC090023.2-201ENST00000540875 DCAF8L1A6NGE4 600 aa10.6□□□□□ -0.71
AC090023.2-201ENST00000540875 EHMT2Q96KQ7 1210 aa10.59□□□□□ -0.71
AC090023.2-201ENST00000540875 SLC4A2P04920 1241 aa10.5□□□□□ -0.73
AC090023.2-201ENST00000540875 CSRNP3Q8WYN3 585 aa10.5□□□□□ -0.73
AC090023.2-201ENST00000540875 ZBTB22O15209 634 aa10.48□□□□□ -0.73
AC090023.2-201ENST00000540875 FOXD4L1Q9NU39 408 aa10.42□□□□□ -0.74
AC090023.2-201ENST00000540875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.38□□□□□ -0.75
AC090023.2-201ENST00000540875 U3KPZ7 1027 aaPredicted RBP10.24□□□□□ -0.77
AC090023.2-201ENST00000540875 MYCNP04198 464 aaPredicted RBP10.23□□□□□ -0.77
AC090023.2-201ENST00000540875 RNF39Q9H2S5 420 aa10.18□□□□□ -0.78
AC090023.2-201ENST00000540875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.09□□□□□ -0.79
AC090023.2-201ENST00000540875 HNRNPUL2Q1KMD3 747 aaKnown RBP10.09□□□□□ -0.79
AC090023.2-201ENST00000540875 SAMD1Q6SPF0 538 aaPredicted RBP10.07□□□□□ -0.8
AC090023.2-201ENST00000540875 ATXN8OSP0DMR3 200 aa10.05□□□□□ -0.8
AC090023.2-201ENST00000540875 C1QBPQ07021 282 aaKnown RBP10.05□□□□□ -0.8
AC090023.2-201ENST00000540875 CACNB1Q02641 598 aaPredicted RBP10.02□□□□□ -0.81
AC090023.2-201ENST00000540875 ATF5Q9Y2D1 282 aaPredicted RBP10.02□□□□□ -0.81
AC090023.2-201ENST00000540875 APLP2Q06481 763 aa9.95□□□□□ -0.82
AC090023.2-201ENST00000540875 SPINK5Q9NQ38 1064 aaPredicted RBP9.95□□□□□ -0.82
AC090023.2-201ENST00000540875 CAPN15O75808 1086 aa9.87□□□□□ -0.83
AC090023.2-201ENST00000540875 TRHP20396 242 aaPredicted RBP9.86□□□□□ -0.83
AC090023.2-201ENST00000540875 ZNF219Q9P2Y4 722 aaPredicted RBP9.83□□□□□ -0.84
AC090023.2-201ENST00000540875 POLA2Q14181 598 aa9.73□□□□□ -0.85
AC090023.2-201ENST00000540875 DSG3P32926 999 aa9.72□□□□□ -0.85
AC090023.2-201ENST00000540875 ABCB7O75027 752 aa9.7□□□□□ -0.86
AC090023.2-201ENST00000540875 MKRN4PQ13434 485 aaPredicted RBP9.58□□□□□ -0.88
AC090023.2-201ENST00000540875 FBLN2P98095 1184 aa9.52□□□□□ -0.89
AC090023.2-201ENST00000540875 ZBTB12Q9Y330 459 aaPredicted RBP9.5□□□□□ -0.89
AC090023.2-201ENST00000540875 FKBP8Q14318 412 aa9.44□□□□□ -0.9
AC090023.2-201ENST00000540875 SPDYE4A6NLX3 237 aa9.36□□□□□ -0.91
AC090023.2-201ENST00000540875 OSCARQ8IYS5 282 aa9.36□□□□□ -0.91
AC090023.2-201ENST00000540875 PELP1Q8IZL8 1130 aaKnown RBP9.35□□□□□ -0.91
AC090023.2-201ENST00000540875 POTEHQ6S545 545 aa9.33□□□□□ -0.92
AC090023.2-201ENST00000540875 MYT1Q01538 1121 aa9.3□□□□□ -0.92
AC090023.2-201ENST00000540875 SPDYE2BA6NHP3 402 aa9.29□□□□□ -0.92
AC090023.2-201ENST00000540875 SPDYE6P0CI01 402 aa9.29□□□□□ -0.92
AC090023.2-201ENST00000540875 SPDYE2Q495Y8 402 aa9.29□□□□□ -0.92
AC090023.2-201ENST00000540875 ZNF692Q9BU19 519 aaPredicted RBP9.28□□□□□ -0.92
AC090023.2-201ENST00000540875 SSUH2Q9Y2M2 353 aa9.24□□□□□ -0.93
AC090023.2-201ENST00000540875 PROM2Q8N271 834 aa9.23□□□□□ -0.93
AC090023.2-201ENST00000540875 RBM42Q9BTD8 480 aaKnown RBP9.21□□□□□ -0.94
AC090023.2-201ENST00000540875 PABPN1Q86U42 306 aaKnown RBP eCLIP9.17□□□□□ -0.94
AC090023.2-201ENST00000540875 AKT1S1Q96B36 256 aa9.14□□□□□ -0.95
AC090023.2-201ENST00000540875 REM2Q8IYK8 340 aaPredicted RBP9.07□□□□□ -0.96
AC090023.2-201ENST00000540875 FBXO3Q9UK99 471 aa9.06□□□□□ -0.96
AC090023.2-201ENST00000540875 TTBK1Q5TCY1 1321 aaPredicted RBP9.01□□□□□ -0.97
AC090023.2-201ENST00000540875 STAG3Q9UJ98 1225 aa9□□□□□ -0.97
AC090023.2-201ENST00000540875 SPDYE1Q8NFV5 336 aaPredicted RBP8.99□□□□□ -0.97
AC090023.2-201ENST00000540875 CLEC11AQ9Y240 323 aa8.97□□□□□ -0.97
AC090023.2-201ENST00000540875 PITPNM1O00562 1244 aa8.94□□□□□ -0.98
AC090023.2-201ENST00000540875 VASPP50552 380 aaPredicted RBP8.94□□□□□ -0.98
AC090023.2-201ENST00000540875 PRR29P0C7W0 189 aa8.9□□□□□ -0.98
AC090023.2-201ENST00000540875 MIER1Q8N108 512 aa8.88□□□□□ -0.99
AC090023.2-201ENST00000540875 IFNLR1Q8IU57 520 aaPredicted RBP8.87□□□□□ -0.99
AC090023.2-201ENST00000540875 PLCD3Q8N3E9 789 aa8.85□□□□□ -0.99
AC090023.2-201ENST00000540875 CHRDL2Q6WN34 429 aa8.82□□□□□ -1
AC090023.2-201ENST00000540875 CREBZFQ9NS37 354 aa8.82□□□□□ -1
AC090023.2-201ENST00000540875 FXR2P51116 673 aaKnown RBP eCLIP8.79□□□□□ -1
AC090023.2-201ENST00000540875 KLHL34Q8N239 644 aa8.79□□□□□ -1
AC090023.2-201ENST00000540875 PLEKHG5O94827 1062 aa8.77□□□□□ -1.01
AC090023.2-201ENST00000540875 CHADLQ6NUI6 762 aa8.76□□□□□ -1.01
AC090023.2-201ENST00000540875 MNX1P50219 401 aaPredicted RBP8.75□□□□□ -1.01
AC090023.2-201ENST00000540875 PIP4P2Q8N4L2 257 aa8.74□□□□□ -1.01
AC090023.2-201ENST00000540875 PRKAR2AP13861 404 aaKnown RBP8.73□□□□□ -1.01
AC090023.2-201ENST00000540875 SPOCK2Q92563 424 aa8.72□□□□□ -1.01
AC090023.2-201ENST00000540875 RTN4Q9NQC3 1192 aaKnown RBP8.72□□□□□ -1.01
AC090023.2-201ENST00000540875 ZBTB47Q9UFB7 747 aaPredicted RBP8.71□□□□□ -1.02
AC090023.2-201ENST00000540875 AMER1Q5JTC6 1135 aaPredicted RBP8.7□□□□□ -1.02
AC090023.2-201ENST00000540875 FARP1Q9Y4F1 1045 aaPredicted RBP8.67□□□□□ -1.02
AC090023.2-201ENST00000540875 NUBP1P53384 320 aa8.66□□□□□ -1.02
AC090023.2-201ENST00000540875 NPM1P06748 294 aaKnown RBP eCLIP8.64□□□□□ -1.03
AC090023.2-201ENST00000540875 PKD2Q13563 968 aa8.6□□□□□ -1.03
AC090023.2-201ENST00000540875 RASEFQ8IZ41 740 aa8.6□□□□□ -1.03
AC090023.2-201ENST00000540875 DCAF8Q5TAQ9 597 aa8.58□□□□□ -1.04
AC090023.2-201ENST00000540875 CIZ1Q9ULV3 898 aaPredicted RBP8.57□□□□□ -1.04
AC090023.2-201ENST00000540875 GSE1Q14687 1217 aa8.54□□□□□ -1.04
AC090023.2-201ENST00000540875 FAM212AQ96EL1 285 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms