RNA–Protein interactions for RNA: ENST00000540875.1

AC090023.2-201, humanhuman

TSL 3 BASIC

Gene AC090023.2, Length 545 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090023.2-201ENST00000540875 AEBP2Q6ZN18 517 aaPredicted RBP16.45■□□□□ 0.22
AC090023.2-201ENST00000540875 CHIC1Q5VXU3 224 aa16.1■□□□□ 0.17
AC090023.2-201ENST00000540875 PHF23Q9BUL5 403 aaPredicted RBP14.21□□□□□ -0.13
AC090023.2-201ENST00000540875 SENP3Q9H4L4 574 aaPredicted RBP13.88□□□□□ -0.19
AC090023.2-201ENST00000540875 PLPPR3Q6T4P5 718 aa13.08□□□□□ -0.32
AC090023.2-201ENST00000540875 FOXD1Q16676 465 aa12.93□□□□□ -0.34
AC090023.2-201ENST00000540875 PPP6R1Q9UPN7 881 aa12.53□□□□□ -0.4
AC090023.2-201ENST00000540875 ADRA2BP18089 450 aa12.5□□□□□ -0.41
AC090023.2-201ENST00000540875 PIAS4Q8N2W9 510 aaPredicted RBP12.15□□□□□ -0.46
AC090023.2-201ENST00000540875 POTEDQ86YR6 584 aa12.1□□□□□ -0.47
AC090023.2-201ENST00000540875 MSH5O43196 834 aa11.83□□□□□ -0.52
AC090023.2-201ENST00000540875 PPP4R3CPQ6ZMV5 832 aa11.57□□□□□ -0.56
AC090023.2-201ENST00000540875 SCAF1Q9H7N4 1312 aaKnown RBP11.39□□□□□ -0.59
AC090023.2-201ENST00000540875 KCNA4P22459 653 aa11.38□□□□□ -0.59
AC090023.2-201ENST00000540875 MAPK8IP2Q13387 824 aaPredicted RBP11.34□□□□□ -0.59
AC090023.2-201ENST00000540875 NCBP3Q53F19 620 aaKnown RBP11.24□□□□□ -0.61
AC090023.2-201ENST00000540875 CNKSR2Q8WXI2 1034 aa11.21□□□□□ -0.61
AC090023.2-201ENST00000540875 NPM3O75607 178 aaKnown RBP11.11□□□□□ -0.63
AC090023.2-201ENST00000540875 DMRT2Q9Y5R5 561 aa11.11□□□□□ -0.63
AC090023.2-201ENST00000540875 RNF216Q9NWF9 866 aaPredicted RBP10.97□□□□□ -0.65
AC090023.2-201ENST00000540875 HOXD11P31277 338 aaPredicted RBP10.93□□□□□ -0.66
AC090023.2-201ENST00000540875 SLC4A1APQ9BWU0 796 aaKnown RBP10.82□□□□□ -0.68
AC090023.2-201ENST00000540875 DNAJC5BQ9UF47 199 aa10.78□□□□□ -0.68
AC090023.2-201ENST00000540875 DCAF8L1A6NGE4 600 aa10.6□□□□□ -0.71
AC090023.2-201ENST00000540875 EHMT2Q96KQ7 1210 aa10.59□□□□□ -0.71
AC090023.2-201ENST00000540875 SLC4A2P04920 1241 aa10.5□□□□□ -0.73
AC090023.2-201ENST00000540875 CSRNP3Q8WYN3 585 aa10.5□□□□□ -0.73
AC090023.2-201ENST00000540875 ZBTB22O15209 634 aa10.48□□□□□ -0.73
AC090023.2-201ENST00000540875 FOXD4L1Q9NU39 408 aa10.42□□□□□ -0.74
AC090023.2-201ENST00000540875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.38□□□□□ -0.75
AC090023.2-201ENST00000540875 U3KPZ7 1027 aaPredicted RBP10.24□□□□□ -0.77
AC090023.2-201ENST00000540875 MYCNP04198 464 aaPredicted RBP10.23□□□□□ -0.77
AC090023.2-201ENST00000540875 RNF39Q9H2S5 420 aa10.18□□□□□ -0.78
AC090023.2-201ENST00000540875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.09□□□□□ -0.79
AC090023.2-201ENST00000540875 HNRNPUL2Q1KMD3 747 aaKnown RBP10.09□□□□□ -0.79
AC090023.2-201ENST00000540875 SAMD1Q6SPF0 538 aaPredicted RBP10.07□□□□□ -0.8
AC090023.2-201ENST00000540875 ATXN8OSP0DMR3 200 aa10.05□□□□□ -0.8
AC090023.2-201ENST00000540875 C1QBPQ07021 282 aaKnown RBP10.05□□□□□ -0.8
AC090023.2-201ENST00000540875 CACNB1Q02641 598 aaPredicted RBP10.02□□□□□ -0.81
AC090023.2-201ENST00000540875 ATF5Q9Y2D1 282 aaPredicted RBP10.02□□□□□ -0.81
AC090023.2-201ENST00000540875 APLP2Q06481 763 aa9.95□□□□□ -0.82
AC090023.2-201ENST00000540875 SPINK5Q9NQ38 1064 aaPredicted RBP9.95□□□□□ -0.82
AC090023.2-201ENST00000540875 CAPN15O75808 1086 aa9.87□□□□□ -0.83
AC090023.2-201ENST00000540875 TRHP20396 242 aaPredicted RBP9.86□□□□□ -0.83
AC090023.2-201ENST00000540875 ZNF219Q9P2Y4 722 aaPredicted RBP9.83□□□□□ -0.84
AC090023.2-201ENST00000540875 POLA2Q14181 598 aa9.73□□□□□ -0.85
AC090023.2-201ENST00000540875 DSG3P32926 999 aa9.72□□□□□ -0.85
AC090023.2-201ENST00000540875 ABCB7O75027 752 aa9.7□□□□□ -0.86
AC090023.2-201ENST00000540875 MKRN4PQ13434 485 aaPredicted RBP9.58□□□□□ -0.88
AC090023.2-201ENST00000540875 FBLN2P98095 1184 aa9.52□□□□□ -0.89
AC090023.2-201ENST00000540875 ZBTB12Q9Y330 459 aaPredicted RBP9.5□□□□□ -0.89
AC090023.2-201ENST00000540875 FKBP8Q14318 412 aa9.44□□□□□ -0.9
AC090023.2-201ENST00000540875 SPDYE4A6NLX3 237 aa9.36□□□□□ -0.91
AC090023.2-201ENST00000540875 OSCARQ8IYS5 282 aa9.36□□□□□ -0.91
AC090023.2-201ENST00000540875 PELP1Q8IZL8 1130 aaKnown RBP9.35□□□□□ -0.91
AC090023.2-201ENST00000540875 POTEHQ6S545 545 aa9.33□□□□□ -0.92
AC090023.2-201ENST00000540875 MYT1Q01538 1121 aa9.3□□□□□ -0.92
AC090023.2-201ENST00000540875 SPDYE2BA6NHP3 402 aa9.29□□□□□ -0.92
AC090023.2-201ENST00000540875 SPDYE6P0CI01 402 aa9.29□□□□□ -0.92
AC090023.2-201ENST00000540875 SPDYE2Q495Y8 402 aa9.29□□□□□ -0.92
AC090023.2-201ENST00000540875 ZNF692Q9BU19 519 aaPredicted RBP9.28□□□□□ -0.92
AC090023.2-201ENST00000540875 SSUH2Q9Y2M2 353 aa9.24□□□□□ -0.93
AC090023.2-201ENST00000540875 PROM2Q8N271 834 aa9.23□□□□□ -0.93
AC090023.2-201ENST00000540875 RBM42Q9BTD8 480 aaKnown RBP9.21□□□□□ -0.94
AC090023.2-201ENST00000540875 PABPN1Q86U42 306 aaKnown RBP eCLIP9.17□□□□□ -0.94
AC090023.2-201ENST00000540875 AKT1S1Q96B36 256 aa9.14□□□□□ -0.95
AC090023.2-201ENST00000540875 REM2Q8IYK8 340 aaPredicted RBP9.07□□□□□ -0.96
AC090023.2-201ENST00000540875 FBXO3Q9UK99 471 aa9.06□□□□□ -0.96
AC090023.2-201ENST00000540875 TTBK1Q5TCY1 1321 aaPredicted RBP9.01□□□□□ -0.97
AC090023.2-201ENST00000540875 STAG3Q9UJ98 1225 aa9□□□□□ -0.97
AC090023.2-201ENST00000540875 SPDYE1Q8NFV5 336 aaPredicted RBP8.99□□□□□ -0.97
AC090023.2-201ENST00000540875 CLEC11AQ9Y240 323 aa8.97□□□□□ -0.97
AC090023.2-201ENST00000540875 PITPNM1O00562 1244 aa8.94□□□□□ -0.98
AC090023.2-201ENST00000540875 VASPP50552 380 aaPredicted RBP8.94□□□□□ -0.98
AC090023.2-201ENST00000540875 PRR29P0C7W0 189 aa8.9□□□□□ -0.98
AC090023.2-201ENST00000540875 MIER1Q8N108 512 aa8.88□□□□□ -0.99
AC090023.2-201ENST00000540875 IFNLR1Q8IU57 520 aaPredicted RBP8.87□□□□□ -0.99
AC090023.2-201ENST00000540875 PLCD3Q8N3E9 789 aa8.85□□□□□ -0.99
AC090023.2-201ENST00000540875 CHRDL2Q6WN34 429 aa8.82□□□□□ -1
AC090023.2-201ENST00000540875 CREBZFQ9NS37 354 aa8.82□□□□□ -1
AC090023.2-201ENST00000540875 FXR2P51116 673 aaKnown RBP eCLIP8.79□□□□□ -1
AC090023.2-201ENST00000540875 KLHL34Q8N239 644 aa8.79□□□□□ -1
AC090023.2-201ENST00000540875 PLEKHG5O94827 1062 aa8.77□□□□□ -1.01
AC090023.2-201ENST00000540875 CHADLQ6NUI6 762 aa8.76□□□□□ -1.01
AC090023.2-201ENST00000540875 MNX1P50219 401 aaPredicted RBP8.75□□□□□ -1.01
AC090023.2-201ENST00000540875 PIP4P2Q8N4L2 257 aa8.74□□□□□ -1.01
AC090023.2-201ENST00000540875 PRKAR2AP13861 404 aaKnown RBP8.73□□□□□ -1.01
AC090023.2-201ENST00000540875 SPOCK2Q92563 424 aa8.72□□□□□ -1.01
AC090023.2-201ENST00000540875 RTN4Q9NQC3 1192 aaKnown RBP8.72□□□□□ -1.01
AC090023.2-201ENST00000540875 ZBTB47Q9UFB7 747 aaPredicted RBP8.71□□□□□ -1.02
AC090023.2-201ENST00000540875 AMER1Q5JTC6 1135 aaPredicted RBP8.7□□□□□ -1.02
AC090023.2-201ENST00000540875 FARP1Q9Y4F1 1045 aaPredicted RBP8.67□□□□□ -1.02
AC090023.2-201ENST00000540875 NUBP1P53384 320 aa8.66□□□□□ -1.02
AC090023.2-201ENST00000540875 NPM1P06748 294 aaKnown RBP eCLIP8.64□□□□□ -1.03
AC090023.2-201ENST00000540875 PKD2Q13563 968 aa8.6□□□□□ -1.03
AC090023.2-201ENST00000540875 RASEFQ8IZ41 740 aa8.6□□□□□ -1.03
AC090023.2-201ENST00000540875 DCAF8Q5TAQ9 597 aa8.58□□□□□ -1.04
AC090023.2-201ENST00000540875 CIZ1Q9ULV3 898 aaPredicted RBP8.57□□□□□ -1.04
AC090023.2-201ENST00000540875 GSE1Q14687 1217 aa8.54□□□□□ -1.04
AC090023.2-201ENST00000540875 FAM212AQ96EL1 285 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms