RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 ABCA13Q86UQ4 5058 aa7.83□□□□□ -1.16
TSFM-207ENST00000540550 H3BS24 57 aa7.81□□□□□ -1.16
TSFM-207ENST00000540550 TPRXLQ17RH7 258 aa7.79□□□□□ -1.16
TSFM-207ENST00000540550 COX6B2Q6YFQ2 88 aa7.77□□□□□ -1.17
TSFM-207ENST00000540550 LINC01554Q52M75 96 aa7.76□□□□□ -1.17
TSFM-207ENST00000540550 KRTAP3-1Q9BYR8 98 aa7.76□□□□□ -1.17
TSFM-207ENST00000540550 A0A1B0GU69 56 aa7.74□□□□□ -1.17
TSFM-207ENST00000540550 J3QL48 77 aa7.74□□□□□ -1.17
TSFM-207ENST00000540550 PRAC1Q96KF2 57 aa7.57□□□□□ -1.2
TSFM-207ENST00000540550 LPAP08519 4548 aa7.56□□□□□ -1.2
TSFM-207ENST00000540550 SEC61BP60468 96 aaKnown RBP7.55□□□□□ -1.2
TSFM-207ENST00000540550 S4R3F8 94 aa7.54□□□□□ -1.2
TSFM-207ENST00000540550 LRP2P98164 4655 aa7.54□□□□□ -1.2
TSFM-207ENST00000540550 UQCR11O14957 56 aa7.54□□□□□ -1.2
TSFM-207ENST00000540550 SPATA8Q6RVD6 105 aa7.52□□□□□ -1.21
TSFM-207ENST00000540550 H1FX-AS1Q4G0G2 97 aa7.51□□□□□ -1.21
TSFM-207ENST00000540550 MIR22HGQ0VDD5 57 aa7.48□□□□□ -1.21
TSFM-207ENST00000540550 PCLOQ9Y6V0 5065 aa7.48□□□□□ -1.21
TSFM-207ENST00000540550 KRTAP3-3Q9BYR6 98 aa7.46□□□□□ -1.21
TSFM-207ENST00000540550 ADM2Q7Z4H4 148 aa7.45□□□□□ -1.22
TSFM-207ENST00000540550 A0A1B0GU33 70 aa7.41□□□□□ -1.22
TSFM-207ENST00000540550 HERC1Q15751 4861 aa7.38□□□□□ -1.23
TSFM-207ENST00000540550 CSAG1Q6PB30 78 aa7.37□□□□□ -1.23
TSFM-207ENST00000540550 MUC17Q685J3 4493 aa7.32□□□□□ -1.24
TSFM-207ENST00000540550 H0YAA0 97 aa7.32□□□□□ -1.24
TSFM-207ENST00000540550 KRTAP4-1Q9BYQ7 146 aa7.32□□□□□ -1.24
TSFM-207ENST00000540550 HMCN2Q8NDA2 5059 aa7.31□□□□□ -1.24
TSFM-207ENST00000540550 KRTAP10-6P60371 365 aaPredicted RBP7.29□□□□□ -1.24
TSFM-207ENST00000540550 KRTAP3-2Q9BYR7 98 aa7.27□□□□□ -1.25
TSFM-207ENST00000540550 ROMO1P60602 79 aa7.23□□□□□ -1.25
TSFM-207ENST00000540550 P0C880 135 aa7.21□□□□□ -1.26
TSFM-207ENST00000540550 KRTAP25-1Q3LHN0 102 aa7.19□□□□□ -1.26
TSFM-207ENST00000540550 KRTAP13-4Q3LI77 160 aa7.14□□□□□ -1.27
TSFM-207ENST00000540550 K7ERS5 55 aa7.13□□□□□ -1.27
TSFM-207ENST00000540550 KRTAP19-2Q3LHN2 52 aa7.13□□□□□ -1.27
TSFM-207ENST00000540550 A0A0D9SG42 100 aa7.09□□□□□ -1.27
TSFM-207ENST00000540550 MUC2Q02817 5179 aa7.09□□□□□ -1.28
TSFM-207ENST00000540550 M0QZ58 72 aa7.05□□□□□ -1.28
TSFM-207ENST00000540550 FLGP20930 4061 aaPredicted RBP7□□□□□ -1.29
TSFM-207ENST00000540550 UBR4Q5T4S7 5183 aa6.97□□□□□ -1.29
TSFM-207ENST00000540550 R4GN34 69 aa6.97□□□□□ -1.29
TSFM-207ENST00000540550 RNF213Q63HN8 5207 aa6.95□□□□□ -1.3
TSFM-207ENST00000540550 SPINT4Q6UDR6 99 aa6.91□□□□□ -1.3
TSFM-207ENST00000540550 KRTAP12-2P59991 146 aa6.89□□□□□ -1.31
TSFM-207ENST00000540550 KRTAP12-1P59990 96 aa6.89□□□□□ -1.31
TSFM-207ENST00000540550 LCE2CQ5TA81 110 aa6.88□□□□□ -1.31
TSFM-207ENST00000540550 LCE2DQ5TA82 110 aaPredicted RBP6.88□□□□□ -1.31
TSFM-207ENST00000540550 LORP23490 312 aaPredicted RBP6.87□□□□□ -1.31
TSFM-207ENST00000540550 A0A0A0MQY5 61 aa6.8□□□□□ -1.32
TSFM-207ENST00000540550 M0R2T5 61 aa6.78□□□□□ -1.32
TSFM-207ENST00000540550 CRIPTQ9P021 101 aa6.78□□□□□ -1.32
TSFM-207ENST00000540550 FAT4Q6V0I7 4981 aa6.76□□□□□ -1.33
TSFM-207ENST00000540550 MT1HP80294 61 aa6.75□□□□□ -1.33
TSFM-207ENST00000540550 KRTAP15-1Q3LI76 137 aa6.69□□□□□ -1.34
TSFM-207ENST00000540550 NDUFAF8A1L188 74 aa6.66□□□□□ -1.34
TSFM-207ENST00000540550 CAMK2N1Q7Z7J9 78 aa6.58□□□□□ -1.36
TSFM-207ENST00000540550 MT2AP02795 61 aa6.55□□□□□ -1.36
TSFM-207ENST00000540550 KRTAP10-10P60014 251 aa6.54□□□□□ -1.36
TSFM-207ENST00000540550 SPRR2GQ9BYE4 73 aa6.54□□□□□ -1.36
TSFM-207ENST00000540550 MT1FP04733 61 aa6.52□□□□□ -1.37
TSFM-207ENST00000540550 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
TSFM-207ENST00000540550 C10orf95Q9H7T3 257 aa6.51□□□□□ -1.37
TSFM-207ENST00000540550 KRTAP19-1Q8IUB9 90 aa6.48□□□□□ -1.37
TSFM-207ENST00000540550 LUZP6Q538Z0 58 aa6.45□□□□□ -1.38
TSFM-207ENST00000540550 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
TSFM-207ENST00000540550 LCE2AQ5TA79 106 aaPredicted RBP6.35□□□□□ -1.39
TSFM-207ENST00000540550 KRTAP19-8Q3LI54 63 aa6.32□□□□□ -1.4
TSFM-207ENST00000540550 TNP1P09430 55 aa6.28□□□□□ -1.4
TSFM-207ENST00000540550 KRTAP9-3Q9BYQ3 159 aa6.27□□□□□ -1.41
TSFM-207ENST00000540550 PP632Q6XCG6 107 aa6.23□□□□□ -1.41
TSFM-207ENST00000540550 MT1BP07438 61 aa6.21□□□□□ -1.41
TSFM-207ENST00000540550 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
TSFM-207ENST00000540550 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
TSFM-207ENST00000540550 MT1XP80297 61 aa6.08□□□□□ -1.44
TSFM-207ENST00000540550 LCE2BO14633 110 aa6.05□□□□□ -1.44
TSFM-207ENST00000540550 PRO2289Q9P1D8 64 aa6.03□□□□□ -1.44
TSFM-207ENST00000540550 KRTAP9-6A0A140TA67 174 aa5.97□□□□□ -1.45
TSFM-207ENST00000540550 LCE3AQ5TA76 89 aa5.95□□□□□ -1.46
TSFM-207ENST00000540550 KRTAP9-2Q9BYQ4 174 aa5.95□□□□□ -1.46
TSFM-207ENST00000540550 USH2AO75445 5202 aa5.91□□□□□ -1.46
TSFM-207ENST00000540550 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
TSFM-207ENST00000540550 KRTAP10-7P60409 375 aaPredicted RBP5.86□□□□□ -1.47
TSFM-207ENST00000540550 KRTAP8-1Q8IUC2 63 aa5.81□□□□□ -1.48
TSFM-207ENST00000540550 SSPOA2VEC9 5147 aa5.71□□□□□ -1.49
TSFM-207ENST00000540550 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
TSFM-207ENST00000540550 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.51
TSFM-207ENST00000540550 KRTAP19-6Q3LI70 58 aa5.64□□□□□ -1.51
TSFM-207ENST00000540550 INE1O15225 51 aa5.62□□□□□ -1.51
TSFM-207ENST00000540550 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
TSFM-207ENST00000540550 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
TSFM-207ENST00000540550 KRTAP4-8Q9BYQ9 185 aa5.56□□□□□ -1.52
TSFM-207ENST00000540550 FSIP2Q5CZC0 6907 aa5.55□□□□□ -1.52
TSFM-207ENST00000540550 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
TSFM-207ENST00000540550 KRTAP4-6Q9BYQ5 205 aa5.55□□□□□ -1.52
TSFM-207ENST00000540550 CRCT1Q9UGL9 99 aa5.54□□□□□ -1.52
TSFM-207ENST00000540550 KMT2DO14686 5537 aa5.48□□□□□ -1.53
TSFM-207ENST00000540550 FCGBPQ9Y6R7 5405 aaPredicted RBP5.42□□□□□ -1.54
TSFM-207ENST00000540550 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
TSFM-207ENST00000540550 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
TSFM-207ENST00000540550 MT1EP04732 61 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms