RNA–Protein interactions for RNA: ENST00000539021.1

PPME1-205, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 2

Gene PPME1, Length 4,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-205ENST00000539021 R4GN34 69 aa4.56□□□□□ -1.68
PPME1-205ENST00000539021 RPL37P61927 97 aaKnown RBP4.56□□□□□ -1.68
PPME1-205ENST00000539021 DYNC1H1Q14204 4646 aaKnown RBP4.55□□□□□ -1.68
PPME1-205ENST00000539021 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
PPME1-205ENST00000539021 PKHD1L1Q86WI1 4243 aa4.52□□□□□ -1.69
PPME1-205ENST00000539021 APOBP04114 4563 aaKnown RBP4.5□□□□□ -1.69
PPME1-205ENST00000539021 KRTAP10-6P60371 365 aaPredicted RBP4.5□□□□□ -1.69
PPME1-205ENST00000539021 KRTAP13-4Q3LI77 160 aa4.49□□□□□ -1.69
PPME1-205ENST00000539021 M0QZ58 72 aa4.48□□□□□ -1.69
PPME1-205ENST00000539021 KRTAP10-4P60372 401 aaPredicted RBP4.48□□□□□ -1.69
PPME1-205ENST00000539021 KRTAP3-3Q9BYR6 98 aa4.47□□□□□ -1.69
PPME1-205ENST00000539021 P0C880 135 aa4.45□□□□□ -1.7
PPME1-205ENST00000539021 KRTAP3-2Q9BYR7 98 aa4.44□□□□□ -1.7
PPME1-205ENST00000539021 TPRXLQ17RH7 258 aa4.44□□□□□ -1.7
PPME1-205ENST00000539021 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
PPME1-205ENST00000539021 SEC61BP60468 96 aaKnown RBP4.43□□□□□ -1.7
PPME1-205ENST00000539021 A0A1B0GVY2 172 aa4.43□□□□□ -1.7
PPME1-205ENST00000539021 FAT3Q8TDW7 4589 aa4.42□□□□□ -1.7
PPME1-205ENST00000539021 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
PPME1-205ENST00000539021 XP32Q5T750 250 aa4.4□□□□□ -1.71
PPME1-205ENST00000539021 HSPG2P98160 4391 aa4.39□□□□□ -1.71
PPME1-205ENST00000539021 LRP1Q07954 4544 aaKnown RBP4.38□□□□□ -1.71
PPME1-205ENST00000539021 KRTAP12-2P59991 146 aa4.37□□□□□ -1.71
PPME1-205ENST00000539021 MYCBP2O75592 4640 aa4.37□□□□□ -1.71
PPME1-205ENST00000539021 TNXBP22105 4242 aa4.33□□□□□ -1.72
PPME1-205ENST00000539021 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
PPME1-205ENST00000539021 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
PPME1-205ENST00000539021 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
PPME1-205ENST00000539021 RYR2Q92736 4967 aa4.27□□□□□ -1.73
PPME1-205ENST00000539021 A0A0A0MQY5 61 aa4.26□□□□□ -1.73
PPME1-205ENST00000539021 PLAC4Q8WY50 150 aa4.23□□□□□ -1.73
PPME1-205ENST00000539021 KMT2CQ8NEZ4 4911 aaKnown RBP4.22□□□□□ -1.73
PPME1-205ENST00000539021 LPAP08519 4548 aa4.19□□□□□ -1.74
PPME1-205ENST00000539021 KRTAP21-3Q3LHN1 58 aa4.19□□□□□ -1.74
PPME1-205ENST00000539021 LRP2P98164 4655 aa4.18□□□□□ -1.74
PPME1-205ENST00000539021 MT1HL1P0DM35 61 aa4.17□□□□□ -1.74
PPME1-205ENST00000539021 RYR1P21817 5038 aa4.16□□□□□ -1.74
PPME1-205ENST00000539021 KRTAP17-1Q9BYP8 105 aa4.11□□□□□ -1.75
PPME1-205ENST00000539021 KIAA1109Q2LD37 5005 aa4.1□□□□□ -1.75
PPME1-205ENST00000539021 RYR3Q15413 4870 aa4.09□□□□□ -1.75
PPME1-205ENST00000539021 TNP1P09430 55 aa4.09□□□□□ -1.76
PPME1-205ENST00000539021 LORP23490 312 aaPredicted RBP4.05□□□□□ -1.76
PPME1-205ENST00000539021 PP632Q6XCG6 107 aa3.98□□□□□ -1.77
PPME1-205ENST00000539021 ABCA13Q86UQ4 5058 aa3.98□□□□□ -1.77
PPME1-205ENST00000539021 KRTAP10-10P60014 251 aa3.96□□□□□ -1.78
PPME1-205ENST00000539021 MUC17Q685J3 4493 aa3.95□□□□□ -1.78
PPME1-205ENST00000539021 KRTAP4-1Q9BYQ7 146 aa3.93□□□□□ -1.78
PPME1-205ENST00000539021 KRTAP4-5Q9BYR2 181 aa3.9□□□□□ -1.78
PPME1-205ENST00000539021 EPPK1P58107 5090 aaKnown RBP3.89□□□□□ -1.79
PPME1-205ENST00000539021 KRTAP19-2Q3LHN2 52 aa3.81□□□□□ -1.8
PPME1-205ENST00000539021 FLGP20930 4061 aaPredicted RBP3.78□□□□□ -1.8
PPME1-205ENST00000539021 MUC2Q02817 5179 aa3.76□□□□□ -1.81
PPME1-205ENST00000539021 KRTAP23-1A1A580 65 aa3.75□□□□□ -1.81
PPME1-205ENST00000539021 HERC2O95714 4834 aa3.74□□□□□ -1.81
PPME1-205ENST00000539021 PRO2289Q9P1D8 64 aa3.71□□□□□ -1.81
PPME1-205ENST00000539021 HERC1Q15751 4861 aa3.71□□□□□ -1.82
PPME1-205ENST00000539021 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
PPME1-205ENST00000539021 BIRC6Q9NR09 4857 aa3.67□□□□□ -1.82
PPME1-205ENST00000539021 PCLOQ9Y6V0 5065 aa3.65□□□□□ -1.83
PPME1-205ENST00000539021 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
PPME1-205ENST00000539021 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
PPME1-205ENST00000539021 FAT4Q6V0I7 4981 aa3.59□□□□□ -1.84
PPME1-205ENST00000539021 KRTAP19-1Q8IUB9 90 aa3.59□□□□□ -1.84
PPME1-205ENST00000539021 LCE2CQ5TA81 110 aa3.55□□□□□ -1.84
PPME1-205ENST00000539021 HMCN2Q8NDA2 5059 aa3.52□□□□□ -1.85
PPME1-205ENST00000539021 MT1FP04733 61 aa3.48□□□□□ -1.85
PPME1-205ENST00000539021 MT1HP80294 61 aa3.48□□□□□ -1.85
PPME1-205ENST00000539021 KRTAP8-1Q8IUC2 63 aa3.48□□□□□ -1.85
PPME1-205ENST00000539021 MT2AP02795 61 aa3.47□□□□□ -1.85
PPME1-205ENST00000539021 KRTAP12-3P60328 96 aa3.44□□□□□ -1.86
PPME1-205ENST00000539021 KRTAP10-12P60413 245 aa3.43□□□□□ -1.86
PPME1-205ENST00000539021 CRCT1Q9UGL9 99 aa3.43□□□□□ -1.86
PPME1-205ENST00000539021 INE1O15225 51 aa3.43□□□□□ -1.86
PPME1-205ENST00000539021 RNF213Q63HN8 5207 aa3.42□□□□□ -1.86
PPME1-205ENST00000539021 UBR4Q5T4S7 5183 aa3.42□□□□□ -1.86
PPME1-205ENST00000539021 KRTAP19-8Q3LI54 63 aa3.41□□□□□ -1.86
PPME1-205ENST00000539021 KRTAP10-5P60370 271 aa3.4□□□□□ -1.86
PPME1-205ENST00000539021 KRTAP9-8Q9BYQ0 159 aa3.4□□□□□ -1.86
PPME1-205ENST00000539021 MT1XP80297 61 aa3.4□□□□□ -1.87
PPME1-205ENST00000539021 MT1BP07438 61 aa3.38□□□□□ -1.87
PPME1-205ENST00000539021 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.88
PPME1-205ENST00000539021 KRTAP9-3Q9BYQ3 159 aa3.25□□□□□ -1.89
PPME1-205ENST00000539021 LCE2DQ5TA82 110 aaPredicted RBP3.24□□□□□ -1.89
PPME1-205ENST00000539021 KRTAP19-5Q3LI72 72 aa3.24□□□□□ -1.89
PPME1-205ENST00000539021 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
PPME1-205ENST00000539021 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.89
PPME1-205ENST00000539021 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
PPME1-205ENST00000539021 FSIP2Q5CZC0 6907 aa3.15□□□□□ -1.9
PPME1-205ENST00000539021 KMT2DO14686 5537 aa3.15□□□□□ -1.91
PPME1-205ENST00000539021 KRTAP4-8A0A0G2JLE6 195 aa3.11□□□□□ -1.91
PPME1-205ENST00000539021 LCE2BO14633 110 aa3.11□□□□□ -1.91
PPME1-205ENST00000539021 KRTAP4-8Q9BYQ9 185 aa3.11□□□□□ -1.91
PPME1-205ENST00000539021 USH2AO75445 5202 aa3.11□□□□□ -1.91
PPME1-205ENST00000539021 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
PPME1-205ENST00000539021 KRTAP4-7Q9BYR0 210 aa3.04□□□□□ -1.92
PPME1-205ENST00000539021 KRTAP2-3P0C7H8 128 aa3.02□□□□□ -1.93
PPME1-205ENST00000539021 KRTAP2-4Q9BYR9 128 aa3.02□□□□□ -1.93
PPME1-205ENST00000539021 KRTAP2-1Q9BYU5 128 aa3.02□□□□□ -1.93
PPME1-205ENST00000539021 KRTAP19-7Q3SYF9 63 aa3.02□□□□□ -1.93
PPME1-205ENST00000539021 SPRR2FQ96RM1 72 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms