RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 KRTAP3-3Q9BYR6 98 aa5□□□□□ -1.61
AMBRA1-211ENST00000533727 KRTAP3-2Q9BYR7 98 aa5□□□□□ -1.61
AMBRA1-211ENST00000533727 DNAH5Q8TE73 4624 aa4.97□□□□□ -1.61
AMBRA1-211ENST00000533727 DNHD1Q96M86 4753 aa4.96□□□□□ -1.62
AMBRA1-211ENST00000533727 KRTAP10-12P60413 245 aa4.95□□□□□ -1.62
AMBRA1-211ENST00000533727 PLECQ15149 4684 aaKnown RBP4.9□□□□□ -1.63
AMBRA1-211ENST00000533727 VPS13DQ5THJ4 4388 aa4.84□□□□□ -1.63
AMBRA1-211ENST00000533727 MT1HP80294 61 aa4.84□□□□□ -1.63
AMBRA1-211ENST00000533727 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
AMBRA1-211ENST00000533727 DYNC1H1Q14204 4646 aaKnown RBP4.83□□□□□ -1.64
AMBRA1-211ENST00000533727 DNAH2Q9P225 4427 aa4.8□□□□□ -1.64
AMBRA1-211ENST00000533727 KRTAP4-1Q9BYQ7 146 aa4.79□□□□□ -1.64
AMBRA1-211ENST00000533727 DNAH17Q9UFH2 4485 aa4.78□□□□□ -1.64
AMBRA1-211ENST00000533727 KRTAP8-1Q8IUC2 63 aa4.75□□□□□ -1.65
AMBRA1-211ENST00000533727 KRTAP12-3P60328 96 aa4.74□□□□□ -1.65
AMBRA1-211ENST00000533727 MT2AP02795 61 aa4.73□□□□□ -1.65
AMBRA1-211ENST00000533727 LRP1BQ9NZR2 4599 aa4.69□□□□□ -1.66
AMBRA1-211ENST00000533727 DYNC2H1Q8NCM8 4307 aaKnown RBP4.68□□□□□ -1.66
AMBRA1-211ENST00000533727 ANK2Q01484 3957 aa4.68□□□□□ -1.66
AMBRA1-211ENST00000533727 FAT2Q9NYQ8 4349 aa4.67□□□□□ -1.66
AMBRA1-211ENST00000533727 LORP23490 312 aaPredicted RBP4.67□□□□□ -1.66
AMBRA1-211ENST00000533727 SPRR2GQ9BYE4 73 aa4.67□□□□□ -1.66
AMBRA1-211ENST00000533727 RYR1P21817 5038 aa4.66□□□□□ -1.66
AMBRA1-211ENST00000533727 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
AMBRA1-211ENST00000533727 STARD9Q9P2P6 4700 aa4.62□□□□□ -1.67
AMBRA1-211ENST00000533727 MT1FP04733 61 aa4.59□□□□□ -1.68
AMBRA1-211ENST00000533727 SACSQ9NZJ4 4579 aa4.59□□□□□ -1.68
AMBRA1-211ENST00000533727 DNAH6Q9C0G6 4158 aa4.58□□□□□ -1.68
AMBRA1-211ENST00000533727 BIRC6Q9NR09 4857 aa4.57□□□□□ -1.68
AMBRA1-211ENST00000533727 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
AMBRA1-211ENST00000533727 PRKDCP78527 4128 aaKnown RBP4.57□□□□□ -1.68
AMBRA1-211ENST00000533727 LYSTQ99698 3801 aa4.56□□□□□ -1.68
AMBRA1-211ENST00000533727 RYR3Q15413 4870 aa4.55□□□□□ -1.68
AMBRA1-211ENST00000533727 RYR2Q92736 4967 aa4.54□□□□□ -1.68
AMBRA1-211ENST00000533727 FAT1Q14517 4588 aa4.54□□□□□ -1.68
AMBRA1-211ENST00000533727 DNAH3Q8TD57 4116 aa4.54□□□□□ -1.68
AMBRA1-211ENST00000533727 DNAH8Q96JB1 4490 aa4.54□□□□□ -1.68
AMBRA1-211ENST00000533727 FRAS1Q86XX4 4008 aa4.51□□□□□ -1.69
AMBRA1-211ENST00000533727 KIAA1109Q2LD37 5005 aa4.5□□□□□ -1.69
AMBRA1-211ENST00000533727 KRTAP17-1Q9BYP8 105 aa4.49□□□□□ -1.69
AMBRA1-211ENST00000533727 HERC1Q15751 4861 aa4.49□□□□□ -1.69
AMBRA1-211ENST00000533727 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
AMBRA1-211ENST00000533727 KRTAP19-8Q3LI54 63 aa4.43□□□□□ -1.7
AMBRA1-211ENST00000533727 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
AMBRA1-211ENST00000533727 KRTAP10-5P60370 271 aa4.42□□□□□ -1.7
AMBRA1-211ENST00000533727 CMYA5Q8N3K9 4069 aa4.41□□□□□ -1.7
AMBRA1-211ENST00000533727 DNAH7Q8WXX0 4024 aa4.39□□□□□ -1.71
AMBRA1-211ENST00000533727 FAT3Q8TDW7 4589 aa4.39□□□□□ -1.71
AMBRA1-211ENST00000533727 KMT2AQ03164 3969 aa4.38□□□□□ -1.71
AMBRA1-211ENST00000533727 APOBP04114 4563 aaKnown RBP4.38□□□□□ -1.71
AMBRA1-211ENST00000533727 HSPG2P98160 4391 aa4.36□□□□□ -1.71
AMBRA1-211ENST00000533727 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
AMBRA1-211ENST00000533727 HERC2O95714 4834 aa4.34□□□□□ -1.71
AMBRA1-211ENST00000533727 HECTD4Q9Y4D8 3996 aa4.33□□□□□ -1.72
AMBRA1-211ENST00000533727 KRTAP19-1Q8IUB9 90 aa4.3□□□□□ -1.72
AMBRA1-211ENST00000533727 KRTAP9-8Q9BYQ0 159 aa4.28□□□□□ -1.72
AMBRA1-211ENST00000533727 VPS13BQ7Z7G8 4022 aa4.27□□□□□ -1.73
AMBRA1-211ENST00000533727 LRP1Q07954 4544 aaKnown RBP4.27□□□□□ -1.73
AMBRA1-211ENST00000533727 LCE2CQ5TA81 110 aa4.26□□□□□ -1.73
AMBRA1-211ENST00000533727 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
AMBRA1-211ENST00000533727 PCLOQ9Y6V0 5065 aa4.24□□□□□ -1.73
AMBRA1-211ENST00000533727 SPRR2EP22531 72 aa4.23□□□□□ -1.73
AMBRA1-211ENST00000533727 SPRR2BP35325 72 aa4.23□□□□□ -1.73
AMBRA1-211ENST00000533727 SPRR2AP35326 72 aa4.23□□□□□ -1.73
AMBRA1-211ENST00000533727 PKHD1L1Q86WI1 4243 aa4.22□□□□□ -1.73
AMBRA1-211ENST00000533727 MYCBP2O75592 4640 aa4.2□□□□□ -1.74
AMBRA1-211ENST00000533727 KRTAP9-3Q9BYQ3 159 aa4.2□□□□□ -1.74
AMBRA1-211ENST00000533727 MT1BP07438 61 aa4.19□□□□□ -1.74
AMBRA1-211ENST00000533727 HYDINQ4G0P3 5121 aa4.17□□□□□ -1.74
AMBRA1-211ENST00000533727 PKD1P98161 4303 aa4.16□□□□□ -1.74
AMBRA1-211ENST00000533727 MT1XP80297 61 aa4.14□□□□□ -1.75
AMBRA1-211ENST00000533727 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
AMBRA1-211ENST00000533727 SPRR2DP22532 72 aa4.12□□□□□ -1.75
AMBRA1-211ENST00000533727 KMT2CQ8NEZ4 4911 aaKnown RBP4.11□□□□□ -1.75
AMBRA1-211ENST00000533727 LCE2BO14633 110 aa4.09□□□□□ -1.75
AMBRA1-211ENST00000533727 LCE2DQ5TA82 110 aaPredicted RBP4.07□□□□□ -1.76
AMBRA1-211ENST00000533727 KRTAP19-2Q3LHN2 52 aa4.06□□□□□ -1.76
AMBRA1-211ENST00000533727 PKHD1P08F94 4074 aa4.05□□□□□ -1.76
AMBRA1-211ENST00000533727 MT1GP13640 62 aa4.05□□□□□ -1.76
AMBRA1-211ENST00000533727 KRTAP9-2Q9BYQ4 174 aa4.05□□□□□ -1.76
AMBRA1-211ENST00000533727 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
AMBRA1-211ENST00000533727 KRTAP19-6Q3LI70 58 aa3.99□□□□□ -1.77
AMBRA1-211ENST00000533727 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
AMBRA1-211ENST00000533727 ABCA13Q86UQ4 5058 aa3.97□□□□□ -1.77
AMBRA1-211ENST00000533727 LCE2AQ5TA79 106 aaPredicted RBP3.97□□□□□ -1.77
AMBRA1-211ENST00000533727 LRP2P98164 4655 aa3.96□□□□□ -1.78
AMBRA1-211ENST00000533727 KRTAP9-6A0A140TA67 174 aa3.93□□□□□ -1.78
AMBRA1-211ENST00000533727 EPPK1P58107 5090 aaKnown RBP3.91□□□□□ -1.78
AMBRA1-211ENST00000533727 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
AMBRA1-211ENST00000533727 KRTAP4-8A0A0G2JLE6 195 aa3.87□□□□□ -1.79
AMBRA1-211ENST00000533727 KRTAP4-8Q9BYQ9 185 aa3.87□□□□□ -1.79
AMBRA1-211ENST00000533727 MUC17Q685J3 4493 aa3.84□□□□□ -1.8
AMBRA1-211ENST00000533727 MT1EP04732 61 aa3.78□□□□□ -1.8
AMBRA1-211ENST00000533727 TNXBP22105 4242 aa3.78□□□□□ -1.8
AMBRA1-211ENST00000533727 FLGP20930 4061 aaPredicted RBP3.77□□□□□ -1.81
AMBRA1-211ENST00000533727 LPAP08519 4548 aa3.76□□□□□ -1.81
AMBRA1-211ENST00000533727 MT1LQ93083 61 aa3.76□□□□□ -1.81
AMBRA1-211ENST00000533727 LCE3BQ5TA77 95 aa3.75□□□□□ -1.81
AMBRA1-211ENST00000533727 RNF213Q63HN8 5207 aa3.71□□□□□ -1.82
AMBRA1-211ENST00000533727 UBR4Q5T4S7 5183 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms