RNA–Protein interactions for RNA: ENST00000529310.5

PCDHA6-203, Transcript of protocadherin alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA6, Length 5,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-203ENST00000529310 KRTAP23-1A1A580 65 aa6.81□□□□□ -1.32
PCDHA6-203ENST00000529310 DNAH9Q9NYC9 4486 aa6.77□□□□□ -1.33
PCDHA6-203ENST00000529310 LCE3AQ5TA76 89 aa6.76□□□□□ -1.33
PCDHA6-203ENST00000529310 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
PCDHA6-203ENST00000529310 DNHD1Q96M86 4753 aa6.59□□□□□ -1.35
PCDHA6-203ENST00000529310 DNAH5Q8TE73 4624 aa6.57□□□□□ -1.36
PCDHA6-203ENST00000529310 CSMD3Q7Z407 3707 aa6.56□□□□□ -1.36
PCDHA6-203ENST00000529310 PLECQ15149 4684 aaKnown RBP6.56□□□□□ -1.36
PCDHA6-203ENST00000529310 DNAH1Q9P2D7 4330 aa6.56□□□□□ -1.36
PCDHA6-203ENST00000529310 DNAH10Q8IVF4 4471 aa6.54□□□□□ -1.36
PCDHA6-203ENST00000529310 DNAH11Q96DT5 4516 aa6.52□□□□□ -1.37
PCDHA6-203ENST00000529310 KRTAP10-5P60370 271 aa6.52□□□□□ -1.37
PCDHA6-203ENST00000529310 VPS13DQ5THJ4 4388 aa6.44□□□□□ -1.38
PCDHA6-203ENST00000529310 KRTAP8-1Q8IUC2 63 aa6.39□□□□□ -1.39
PCDHA6-203ENST00000529310 STARD9Q9P2P6 4700 aa6.38□□□□□ -1.39
PCDHA6-203ENST00000529310 ANK2Q01484 3957 aa6.36□□□□□ -1.39
PCDHA6-203ENST00000529310 PRKDCP78527 4128 aaKnown RBP6.35□□□□□ -1.39
PCDHA6-203ENST00000529310 DNAH17Q9UFH2 4485 aa6.34□□□□□ -1.39
PCDHA6-203ENST00000529310 MT1HP80294 61 aa6.34□□□□□ -1.39
PCDHA6-203ENST00000529310 KRTAP4-1Q9BYQ7 146 aa6.33□□□□□ -1.4
PCDHA6-203ENST00000529310 DNAH2Q9P225 4427 aa6.33□□□□□ -1.4
PCDHA6-203ENST00000529310 DYNC1H1Q14204 4646 aaKnown RBP6.29□□□□□ -1.4
PCDHA6-203ENST00000529310 LRP1BQ9NZR2 4599 aa6.23□□□□□ -1.41
PCDHA6-203ENST00000529310 MT2AP02795 61 aa6.2□□□□□ -1.42
PCDHA6-203ENST00000529310 DYNC2H1Q8NCM8 4307 aaKnown RBP6.19□□□□□ -1.42
PCDHA6-203ENST00000529310 DNAH3Q8TD57 4116 aa6.19□□□□□ -1.42
PCDHA6-203ENST00000529310 FAT1Q14517 4588 aa6.19□□□□□ -1.42
PCDHA6-203ENST00000529310 RYR1P21817 5038 aa6.15□□□□□ -1.42
PCDHA6-203ENST00000529310 DNAH6Q9C0G6 4158 aa6.15□□□□□ -1.43
PCDHA6-203ENST00000529310 FAT2Q9NYQ8 4349 aa6.14□□□□□ -1.43
PCDHA6-203ENST00000529310 KMT2AQ03164 3969 aa6.13□□□□□ -1.43
PCDHA6-203ENST00000529310 CMYA5Q8N3K9 4069 aa6.11□□□□□ -1.43
PCDHA6-203ENST00000529310 SPRR2GQ9BYE4 73 aa6.09□□□□□ -1.44
PCDHA6-203ENST00000529310 SACSQ9NZJ4 4579 aa6.05□□□□□ -1.44
PCDHA6-203ENST00000529310 MT1FP04733 61 aa6.04□□□□□ -1.44
PCDHA6-203ENST00000529310 DNAH8Q96JB1 4490 aa6.02□□□□□ -1.45
PCDHA6-203ENST00000529310 KRTAP19-5Q3LI72 72 aa5.99□□□□□ -1.45
PCDHA6-203ENST00000529310 KIAA1109Q2LD37 5005 aa5.97□□□□□ -1.45
PCDHA6-203ENST00000529310 LCE3CQ5T5A8 94 aa5.97□□□□□ -1.45
PCDHA6-203ENST00000529310 RYR3Q15413 4870 aa5.95□□□□□ -1.46
PCDHA6-203ENST00000529310 LYSTQ99698 3801 aa5.95□□□□□ -1.46
PCDHA6-203ENST00000529310 KRTAP10-7P60409 375 aaPredicted RBP5.94□□□□□ -1.46
PCDHA6-203ENST00000529310 VPS13BQ7Z7G8 4022 aa5.92□□□□□ -1.46
PCDHA6-203ENST00000529310 KRTAP17-1Q9BYP8 105 aa5.92□□□□□ -1.46
PCDHA6-203ENST00000529310 SPRR2FQ96RM1 72 aa5.92□□□□□ -1.46
PCDHA6-203ENST00000529310 RYR2Q92736 4967 aa5.85□□□□□ -1.47
PCDHA6-203ENST00000529310 DNAH7Q8WXX0 4024 aa5.84□□□□□ -1.47
PCDHA6-203ENST00000529310 APOBP04114 4563 aaKnown RBP5.84□□□□□ -1.47
PCDHA6-203ENST00000529310 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
PCDHA6-203ENST00000529310 HECTD4Q9Y4D8 3996 aa5.8□□□□□ -1.48
PCDHA6-203ENST00000529310 HYDINQ4G0P3 5121 aa5.78□□□□□ -1.48
PCDHA6-203ENST00000529310 BIRC6Q9NR09 4857 aa5.78□□□□□ -1.48
PCDHA6-203ENST00000529310 FAT3Q8TDW7 4589 aa5.75□□□□□ -1.49
PCDHA6-203ENST00000529310 LRP1Q07954 4544 aaKnown RBP5.75□□□□□ -1.49
PCDHA6-203ENST00000529310 MYCBP2O75592 4640 aa5.74□□□□□ -1.49
PCDHA6-203ENST00000529310 FRAS1Q86XX4 4008 aa5.73□□□□□ -1.49
PCDHA6-203ENST00000529310 HERC1Q15751 4861 aa5.71□□□□□ -1.5
PCDHA6-203ENST00000529310 KRTAP19-8Q3LI54 63 aa5.7□□□□□ -1.5
PCDHA6-203ENST00000529310 HSPG2P98160 4391 aa5.69□□□□□ -1.5
PCDHA6-203ENST00000529310 KRTAP19-1Q8IUB9 90 aa5.63□□□□□ -1.51
PCDHA6-203ENST00000529310 PKHD1P08F94 4074 aa5.62□□□□□ -1.51
PCDHA6-203ENST00000529310 HERC2O95714 4834 aa5.62□□□□□ -1.51
PCDHA6-203ENST00000529310 SPRR2EP22531 72 aa5.6□□□□□ -1.51
PCDHA6-203ENST00000529310 SPRR2BP35325 72 aa5.6□□□□□ -1.51
PCDHA6-203ENST00000529310 SPRR2AP35326 72 aa5.6□□□□□ -1.51
PCDHA6-203ENST00000529310 LCE3BQ5TA77 95 aa5.57□□□□□ -1.52
PCDHA6-203ENST00000529310 KRTAP9-8Q9BYQ0 159 aa5.56□□□□□ -1.52
PCDHA6-203ENST00000529310 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
PCDHA6-203ENST00000529310 PKD1P98161 4303 aa5.54□□□□□ -1.52
PCDHA6-203ENST00000529310 KMT2CQ8NEZ4 4911 aaKnown RBP5.53□□□□□ -1.52
PCDHA6-203ENST00000529310 LCE2CQ5TA81 110 aa5.5□□□□□ -1.53
PCDHA6-203ENST00000529310 MT1XP80297 61 aa5.49□□□□□ -1.53
PCDHA6-203ENST00000529310 MT1BP07438 61 aa5.48□□□□□ -1.53
PCDHA6-203ENST00000529310 MT1GP13640 62 aa5.46□□□□□ -1.53
PCDHA6-203ENST00000529310 PKHD1L1Q86WI1 4243 aa5.46□□□□□ -1.54
PCDHA6-203ENST00000529310 KRTAP9-3Q9BYQ3 159 aa5.45□□□□□ -1.54
PCDHA6-203ENST00000529310 PCLOQ9Y6V0 5065 aa5.45□□□□□ -1.54
PCDHA6-203ENST00000529310 LRP2P98164 4655 aa5.44□□□□□ -1.54
PCDHA6-203ENST00000529310 SPRR2DP22532 72 aa5.43□□□□□ -1.54
PCDHA6-203ENST00000529310 SPRR5A0A1B0GTR4 108 aa5.41□□□□□ -1.54
PCDHA6-203ENST00000529310 LCE2BO14633 110 aa5.38□□□□□ -1.55
PCDHA6-203ENST00000529310 LCE3DQ9BYE3 92 aa5.32□□□□□ -1.56
PCDHA6-203ENST00000529310 EPPK1P58107 5090 aaKnown RBP5.31□□□□□ -1.56
PCDHA6-203ENST00000529310 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
PCDHA6-203ENST00000529310 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
PCDHA6-203ENST00000529310 KRTAP19-2Q3LHN2 52 aa5.29□□□□□ -1.56
PCDHA6-203ENST00000529310 LPAP08519 4548 aa5.27□□□□□ -1.57
PCDHA6-203ENST00000529310 LCE3EQ5T5B0 92 aa5.25□□□□□ -1.57
PCDHA6-203ENST00000529310 TNXBP22105 4242 aa5.25□□□□□ -1.57
PCDHA6-203ENST00000529310 ABCA13Q86UQ4 5058 aa5.23□□□□□ -1.57
PCDHA6-203ENST00000529310 KRTAP9-2Q9BYQ4 174 aa5.18□□□□□ -1.58
PCDHA6-203ENST00000529310 MUC17Q685J3 4493 aa5.11□□□□□ -1.59
PCDHA6-203ENST00000529310 LCE2DQ5TA82 110 aaPredicted RBP5.08□□□□□ -1.6
PCDHA6-203ENST00000529310 KRTAP19-3Q7Z4W3 81 aa5.08□□□□□ -1.6
PCDHA6-203ENST00000529310 KRTAP19-6Q3LI70 58 aa5.07□□□□□ -1.6
PCDHA6-203ENST00000529310 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
PCDHA6-203ENST00000529310 MT1LQ93083 61 aa5.04□□□□□ -1.6
PCDHA6-203ENST00000529310 LCE2AQ5TA79 106 aaPredicted RBP5.03□□□□□ -1.6
PCDHA6-203ENST00000529310 FLGP20930 4061 aaPredicted RBP4.97□□□□□ -1.61
PCDHA6-203ENST00000529310 KRTAP9-6A0A140TA67 174 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms