RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 LINC00304Q8N9R0 145 aa3.05□□□□□ -1.92
CLINT1-208ENST00000524306 VPS13BQ7Z7G8 4022 aa3.04□□□□□ -1.92
CLINT1-208ENST00000524306 LRP1BQ9NZR2 4599 aa3.04□□□□□ -1.92
CLINT1-208ENST00000524306 C20orf166-AS1Q96NR2 134 aa3.03□□□□□ -1.92
CLINT1-208ENST00000524306 A8MUU9 505 aa3.03□□□□□ -1.93
CLINT1-208ENST00000524306 SPINK7P58062 85 aa3.02□□□□□ -1.93
CLINT1-208ENST00000524306 TGP01266 2768 aa3.01□□□□□ -1.93
CLINT1-208ENST00000524306 APOBP04114 4563 aaKnown RBP3.01□□□□□ -1.93
CLINT1-208ENST00000524306 LINC01554Q52M75 96 aa2.98□□□□□ -1.93
CLINT1-208ENST00000524306 SPATA8Q6RVD6 105 aa2.98□□□□□ -1.93
CLINT1-208ENST00000524306 A0A1B0GU69 56 aa2.98□□□□□ -1.93
CLINT1-208ENST00000524306 UQCR11O14957 56 aa2.96□□□□□ -1.94
CLINT1-208ENST00000524306 RETNLBQ9BQ08 111 aa2.96□□□□□ -1.94
CLINT1-208ENST00000524306 MIR22HGQ0VDD5 57 aa2.94□□□□□ -1.94
CLINT1-208ENST00000524306 KRTAP10-8P60410 259 aa2.94□□□□□ -1.94
CLINT1-208ENST00000524306 TNXBP22105 4242 aa2.92□□□□□ -1.94
CLINT1-208ENST00000524306 SMR3BP02814 79 aaPredicted RBP2.92□□□□□ -1.94
CLINT1-208ENST00000524306 PRAC1Q96KF2 57 aa2.92□□□□□ -1.94
CLINT1-208ENST00000524306 Q8N1X5 172 aa2.91□□□□□ -1.94
CLINT1-208ENST00000524306 KMT2CQ8NEZ4 4911 aaKnown RBP2.91□□□□□ -1.94
CLINT1-208ENST00000524306 HSPG2P98160 4391 aa2.9□□□□□ -1.94
CLINT1-208ENST00000524306 KRTAP3-1Q9BYR8 98 aa2.9□□□□□ -1.94
CLINT1-208ENST00000524306 COX6B2Q6YFQ2 88 aa2.9□□□□□ -1.95
CLINT1-208ENST00000524306 Q5VSD8 79 aa2.89□□□□□ -1.95
CLINT1-208ENST00000524306 RYR1P21817 5038 aa2.89□□□□□ -1.95
CLINT1-208ENST00000524306 LCE5AQ5TCM9 118 aa2.89□□□□□ -1.95
CLINT1-208ENST00000524306 C9orf92A6NGG3 77 aa2.88□□□□□ -1.95
CLINT1-208ENST00000524306 RPL37P61927 97 aaKnown RBP2.88□□□□□ -1.95
CLINT1-208ENST00000524306 FAT1Q14517 4588 aa2.87□□□□□ -1.95
CLINT1-208ENST00000524306 FAT3Q8TDW7 4589 aa2.87□□□□□ -1.95
CLINT1-208ENST00000524306 ADM2Q7Z4H4 148 aa2.86□□□□□ -1.95
CLINT1-208ENST00000524306 RYR3Q15413 4870 aa2.86□□□□□ -1.95
CLINT1-208ENST00000524306 MT1HL1P0DM35 61 aa2.85□□□□□ -1.95
CLINT1-208ENST00000524306 H1FX-AS1Q4G0G2 97 aa2.84□□□□□ -1.95
CLINT1-208ENST00000524306 CSAG1Q6PB30 78 aa2.84□□□□□ -1.96
CLINT1-208ENST00000524306 A0A1B0GU33 70 aa2.83□□□□□ -1.96
CLINT1-208ENST00000524306 FLG2Q5D862 2391 aaPredicted RBP2.82□□□□□ -1.96
CLINT1-208ENST00000524306 H0YAA0 97 aa2.82□□□□□ -1.96
CLINT1-208ENST00000524306 TPRXLQ17RH7 258 aa2.81□□□□□ -1.96
CLINT1-208ENST00000524306 KRTAP25-1Q3LHN0 102 aa2.8□□□□□ -1.96
CLINT1-208ENST00000524306 K7ERS5 55 aa2.79□□□□□ -1.96
CLINT1-208ENST00000524306 LRP1Q07954 4544 aaKnown RBP2.77□□□□□ -1.97
CLINT1-208ENST00000524306 KRTAP10-6P60371 365 aaPredicted RBP2.77□□□□□ -1.97
CLINT1-208ENST00000524306 ROMO1P60602 79 aa2.77□□□□□ -1.97
CLINT1-208ENST00000524306 S4R3F8 94 aa2.77□□□□□ -1.97
CLINT1-208ENST00000524306 LCE4AQ5TA78 99 aa2.75□□□□□ -1.97
CLINT1-208ENST00000524306 HERC2O95714 4834 aa2.73□□□□□ -1.97
CLINT1-208ENST00000524306 EPPK1P58107 5090 aaKnown RBP2.72□□□□□ -1.97
CLINT1-208ENST00000524306 BIRC6Q9NR09 4857 aa2.72□□□□□ -1.97
CLINT1-208ENST00000524306 KIAA1109Q2LD37 5005 aa2.72□□□□□ -1.97
CLINT1-208ENST00000524306 MYCBP2O75592 4640 aa2.71□□□□□ -1.98
CLINT1-208ENST00000524306 MUC17Q685J3 4493 aa2.7□□□□□ -1.98
CLINT1-208ENST00000524306 M0QZ58 72 aa2.69□□□□□ -1.98
CLINT1-208ENST00000524306 SEC61BP60468 96 aaKnown RBP2.69□□□□□ -1.98
CLINT1-208ENST00000524306 KRTAP19-4Q3LI73 84 aa2.69□□□□□ -1.98
CLINT1-208ENST00000524306 P0C880 135 aa2.68□□□□□ -1.98
CLINT1-208ENST00000524306 KRTAP13-4Q3LI77 160 aa2.68□□□□□ -1.98
CLINT1-208ENST00000524306 LUZP6Q538Z0 58 aa2.65□□□□□ -1.98
CLINT1-208ENST00000524306 ABCA13Q86UQ4 5058 aa2.65□□□□□ -1.99
CLINT1-208ENST00000524306 NDUFAF8A1L188 74 aa2.64□□□□□ -1.99
CLINT1-208ENST00000524306 KRTAP9-3Q9BYQ3 159 aa2.63□□□□□ -1.99
CLINT1-208ENST00000524306 KRTAP12-1P59990 96 aa2.62□□□□□ -1.99
CLINT1-208ENST00000524306 KRTAP9-7A8MTY7 169 aa2.62□□□□□ -1.99
CLINT1-208ENST00000524306 SPINT4Q6UDR6 99 aa2.61□□□□□ -1.99
CLINT1-208ENST00000524306 KRTAP12-2P59991 146 aa2.6□□□□□ -1.99
CLINT1-208ENST00000524306 KRTAP19-2Q3LHN2 52 aa2.59□□□□□ -1.99
CLINT1-208ENST00000524306 CRIPTQ9P021 101 aa2.59□□□□□ -1.99
CLINT1-208ENST00000524306 DMBT1Q9UGM3 2413 aaPredicted RBP2.59□□□□□ -1.99
CLINT1-208ENST00000524306 A0A0D9SG42 100 aa2.58□□□□□ -2
CLINT1-208ENST00000524306 KRTAP15-1Q3LI76 137 aa2.56□□□□□ -2
CLINT1-208ENST00000524306 KRTAP4-1Q9BYQ7 146 aa2.55□□□□□ -2
CLINT1-208ENST00000524306 LRP2P98164 4655 aa2.55□□□□□ -2
CLINT1-208ENST00000524306 R4GN34 69 aa2.54□□□□□ -2
CLINT1-208ENST00000524306 PCLOQ9Y6V0 5065 aa2.52□□□□□ -2.01
CLINT1-208ENST00000524306 LPAP08519 4548 aa2.52□□□□□ -2.01
CLINT1-208ENST00000524306 HMCN2Q8NDA2 5059 aa2.52□□□□□ -2.01
CLINT1-208ENST00000524306 C10orf95Q9H7T3 257 aa2.5□□□□□ -2.01
CLINT1-208ENST00000524306 HERC1Q15751 4861 aa2.48□□□□□ -2.01
CLINT1-208ENST00000524306 FLGP20930 4061 aaPredicted RBP2.48□□□□□ -2.01
CLINT1-208ENST00000524306 KRTAP23-1A1A580 65 aa2.47□□□□□ -2.01
CLINT1-208ENST00000524306 PP632Q6XCG6 107 aa2.47□□□□□ -2.01
CLINT1-208ENST00000524306 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
CLINT1-208ENST00000524306 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
CLINT1-208ENST00000524306 SPRR2GQ9BYE4 73 aa2.41□□□□□ -2.02
CLINT1-208ENST00000524306 CAMK2N1Q7Z7J9 78 aa2.4□□□□□ -2.03
CLINT1-208ENST00000524306 PLAC4Q8WY50 150 aa2.4□□□□□ -2.03
CLINT1-208ENST00000524306 MT1HP80294 61 aa2.38□□□□□ -2.03
CLINT1-208ENST00000524306 TNP1P09430 55 aa2.35□□□□□ -2.03
CLINT1-208ENST00000524306 RNF213Q63HN8 5207 aa2.34□□□□□ -2.04
CLINT1-208ENST00000524306 KRTAP19-8Q3LI54 63 aa2.33□□□□□ -2.04
CLINT1-208ENST00000524306 MT2AP02795 61 aa2.3□□□□□ -2.04
CLINT1-208ENST00000524306 SPRR5A0A1B0GTR4 108 aa2.29□□□□□ -2.04
CLINT1-208ENST00000524306 MT1FP04733 61 aa2.28□□□□□ -2.04
CLINT1-208ENST00000524306 M0R2T5 61 aa2.26□□□□□ -2.05
CLINT1-208ENST00000524306 UBR4Q5T4S7 5183 aa2.25□□□□□ -2.05
CLINT1-208ENST00000524306 KRTAP10-10P60014 251 aa2.24□□□□□ -2.05
CLINT1-208ENST00000524306 FAT4Q6V0I7 4981 aa2.24□□□□□ -2.05
CLINT1-208ENST00000524306 MT1BP07438 61 aa2.23□□□□□ -2.05
CLINT1-208ENST00000524306 KRTAP8-1Q8IUC2 63 aa2.23□□□□□ -2.05
CLINT1-208ENST00000524306 PRO2289Q9P1D8 64 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms