RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 KMT2AQ03164 3969 aa4.5□□□□□ -1.69
CSMD1-212ENST00000523387 LRP1BQ9NZR2 4599 aa4.5□□□□□ -1.69
CSMD1-212ENST00000523387 HECTD4Q9Y4D8 3996 aa4.5□□□□□ -1.69
CSMD1-212ENST00000523387 DNAH2Q9P225 4427 aa4.49□□□□□ -1.69
CSMD1-212ENST00000523387 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
CSMD1-212ENST00000523387 PLAC4Q8WY50 150 aa4.47□□□□□ -1.69
CSMD1-212ENST00000523387 DYNC2H1Q8NCM8 4307 aaKnown RBP4.42□□□□□ -1.7
CSMD1-212ENST00000523387 DNAH6Q9C0G6 4158 aa4.41□□□□□ -1.7
CSMD1-212ENST00000523387 PRKDCP78527 4128 aaKnown RBP4.39□□□□□ -1.71
CSMD1-212ENST00000523387 A0A1B0GVY2 172 aa4.38□□□□□ -1.71
CSMD1-212ENST00000523387 VPS13BQ7Z7G8 4022 aa4.38□□□□□ -1.71
CSMD1-212ENST00000523387 DNAH5Q8TE73 4624 aa4.38□□□□□ -1.71
CSMD1-212ENST00000523387 J3QL48 77 aa4.37□□□□□ -1.71
CSMD1-212ENST00000523387 KRTAP10-4P60372 401 aaPredicted RBP4.37□□□□□ -1.71
CSMD1-212ENST00000523387 SEC61BP60468 96 aaKnown RBP4.35□□□□□ -1.71
CSMD1-212ENST00000523387 FAT1Q14517 4588 aa4.32□□□□□ -1.72
CSMD1-212ENST00000523387 PP632Q6XCG6 107 aa4.31□□□□□ -1.72
CSMD1-212ENST00000523387 SACSQ9NZJ4 4579 aa4.25□□□□□ -1.73
CSMD1-212ENST00000523387 DYNC1H1Q14204 4646 aaKnown RBP4.25□□□□□ -1.73
CSMD1-212ENST00000523387 TNP1P09430 55 aa4.23□□□□□ -1.73
CSMD1-212ENST00000523387 MYCBP2O75592 4640 aa4.2□□□□□ -1.74
CSMD1-212ENST00000523387 DNHD1Q96M86 4753 aa4.19□□□□□ -1.74
CSMD1-212ENST00000523387 HYDINQ4G0P3 5121 aa4.17□□□□□ -1.74
CSMD1-212ENST00000523387 MT1HL1P0DM35 61 aa4.16□□□□□ -1.74
CSMD1-212ENST00000523387 LORP23490 312 aaPredicted RBP4.14□□□□□ -1.75
CSMD1-212ENST00000523387 APOBP04114 4563 aaKnown RBP4.14□□□□□ -1.75
CSMD1-212ENST00000523387 PKHD1P08F94 4074 aa4.14□□□□□ -1.75
CSMD1-212ENST00000523387 FAT2Q9NYQ8 4349 aa4.12□□□□□ -1.75
CSMD1-212ENST00000523387 PKD1P98161 4303 aa4.12□□□□□ -1.75
CSMD1-212ENST00000523387 LRP1Q07954 4544 aaKnown RBP4.11□□□□□ -1.75
CSMD1-212ENST00000523387 M0R2T5 61 aa4.09□□□□□ -1.75
CSMD1-212ENST00000523387 FAT3Q8TDW7 4589 aa4.05□□□□□ -1.76
CSMD1-212ENST00000523387 HSPG2P98160 4391 aa4□□□□□ -1.77
CSMD1-212ENST00000523387 PKHD1L1Q86WI1 4243 aa3.97□□□□□ -1.77
CSMD1-212ENST00000523387 LRP2P98164 4655 aa3.96□□□□□ -1.78
CSMD1-212ENST00000523387 RYR1P21817 5038 aa3.91□□□□□ -1.78
CSMD1-212ENST00000523387 KRTAP4-1Q9BYQ7 146 aa3.91□□□□□ -1.78
CSMD1-212ENST00000523387 KIAA1109Q2LD37 5005 aa3.91□□□□□ -1.78
CSMD1-212ENST00000523387 KRTAP17-1Q9BYP8 105 aa3.9□□□□□ -1.79
CSMD1-212ENST00000523387 KMT2CQ8NEZ4 4911 aaKnown RBP3.89□□□□□ -1.79
CSMD1-212ENST00000523387 KRTAP4-5Q9BYR2 181 aa3.89□□□□□ -1.79
CSMD1-212ENST00000523387 KRTAP23-1A1A580 65 aa3.87□□□□□ -1.79
CSMD1-212ENST00000523387 TNXBP22105 4242 aa3.84□□□□□ -1.79
CSMD1-212ENST00000523387 RYR2Q92736 4967 aa3.84□□□□□ -1.8
CSMD1-212ENST00000523387 KRTAP10-10P60014 251 aa3.84□□□□□ -1.8
CSMD1-212ENST00000523387 LCE2DQ5TA82 110 aaPredicted RBP3.84□□□□□ -1.8
CSMD1-212ENST00000523387 PRO2289Q9P1D8 64 aa3.82□□□□□ -1.8
CSMD1-212ENST00000523387 RYR3Q15413 4870 aa3.82□□□□□ -1.8
CSMD1-212ENST00000523387 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
CSMD1-212ENST00000523387 LPAP08519 4548 aa3.78□□□□□ -1.8
CSMD1-212ENST00000523387 INE1O15225 51 aa3.77□□□□□ -1.81
CSMD1-212ENST00000523387 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
CSMD1-212ENST00000523387 KRTAP12-3P60328 96 aa3.66□□□□□ -1.82
CSMD1-212ENST00000523387 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
CSMD1-212ENST00000523387 SPRR2GQ9BYE4 73 aa3.63□□□□□ -1.83
CSMD1-212ENST00000523387 KRTAP19-2Q3LHN2 52 aa3.62□□□□□ -1.83
CSMD1-212ENST00000523387 ABCA13Q86UQ4 5058 aa3.59□□□□□ -1.83
CSMD1-212ENST00000523387 KRTAP19-1Q8IUB9 90 aa3.59□□□□□ -1.84
CSMD1-212ENST00000523387 KRTAP8-1Q8IUC2 63 aa3.57□□□□□ -1.84
CSMD1-212ENST00000523387 LCE2CQ5TA81 110 aa3.55□□□□□ -1.84
CSMD1-212ENST00000523387 BIRC6Q9NR09 4857 aa3.54□□□□□ -1.84
CSMD1-212ENST00000523387 LCE2BO14633 110 aa3.54□□□□□ -1.84
CSMD1-212ENST00000523387 MUC17Q685J3 4493 aa3.54□□□□□ -1.84
CSMD1-212ENST00000523387 HERC2O95714 4834 aa3.52□□□□□ -1.85
CSMD1-212ENST00000523387 MT2AP02795 61 aa3.51□□□□□ -1.85
CSMD1-212ENST00000523387 MT1FP04733 61 aa3.51□□□□□ -1.85
CSMD1-212ENST00000523387 FLGP20930 4061 aaPredicted RBP3.5□□□□□ -1.85
CSMD1-212ENST00000523387 MT1HP80294 61 aa3.49□□□□□ -1.85
CSMD1-212ENST00000523387 EPPK1P58107 5090 aaKnown RBP3.49□□□□□ -1.85
CSMD1-212ENST00000523387 MUC2Q02817 5179 aa3.47□□□□□ -1.85
CSMD1-212ENST00000523387 LCE2AQ5TA79 106 aaPredicted RBP3.42□□□□□ -1.86
CSMD1-212ENST00000523387 HERC1Q15751 4861 aa3.41□□□□□ -1.86
CSMD1-212ENST00000523387 MT1XP80297 61 aa3.41□□□□□ -1.86
CSMD1-212ENST00000523387 KRTAP10-5P60370 271 aa3.41□□□□□ -1.86
CSMD1-212ENST00000523387 KRTAP10-7P60409 375 aaPredicted RBP3.4□□□□□ -1.86
CSMD1-212ENST00000523387 KRTAP19-8Q3LI54 63 aa3.4□□□□□ -1.86
CSMD1-212ENST00000523387 MT1BP07438 61 aa3.37□□□□□ -1.87
CSMD1-212ENST00000523387 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
CSMD1-212ENST00000523387 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
CSMD1-212ENST00000523387 FAT4Q6V0I7 4981 aa3.35□□□□□ -1.87
CSMD1-212ENST00000523387 KRTAP9-8Q9BYQ0 159 aa3.35□□□□□ -1.87
CSMD1-212ENST00000523387 HMCN2Q8NDA2 5059 aa3.29□□□□□ -1.88
CSMD1-212ENST00000523387 PCLOQ9Y6V0 5065 aa3.26□□□□□ -1.89
CSMD1-212ENST00000523387 RNF213Q63HN8 5207 aa3.21□□□□□ -1.9
CSMD1-212ENST00000523387 KRTAP9-3Q9BYQ3 159 aa3.2□□□□□ -1.9
CSMD1-212ENST00000523387 CRCT1Q9UGL9 99 aa3.2□□□□□ -1.9
CSMD1-212ENST00000523387 KRTAP4-8A0A0G2JLE6 195 aa3.19□□□□□ -1.9
CSMD1-212ENST00000523387 KRTAP4-8Q9BYQ9 185 aa3.19□□□□□ -1.9
CSMD1-212ENST00000523387 UBR4Q5T4S7 5183 aa3.17□□□□□ -1.9
CSMD1-212ENST00000523387 KRTAP4-7Q9BYR0 210 aa3.15□□□□□ -1.91
CSMD1-212ENST00000523387 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
CSMD1-212ENST00000523387 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
CSMD1-212ENST00000523387 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
CSMD1-212ENST00000523387 KRTAP2-1Q9BYU5 128 aa3.04□□□□□ -1.92
CSMD1-212ENST00000523387 KRTAP19-4Q3LI73 84 aa3.03□□□□□ -1.92
CSMD1-212ENST00000523387 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
CSMD1-212ENST00000523387 MT1LQ93083 61 aa3.01□□□□□ -1.93
CSMD1-212ENST00000523387 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
CSMD1-212ENST00000523387 KMT2DO14686 5537 aa2.99□□□□□ -1.93
CSMD1-212ENST00000523387 MT1GP13640 62 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms